; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004711 (gene) of Snake gourd v1 genome

Gene IDTan0004711
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG04:41096771..41097975
RNA-Seq ExpressionTan0004711
SyntenyTan0004711
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022932792.1 uncharacterized protein LOC111439252 [Cucurbita moschata]9.2e-6269.23Show/hide
Query:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV
        +  +K E  KVVSLNEE  A+ ++KIP KEKDPGS TI VSIGG +LGRAL DL AS+ L+PLSIYK LGIGEA PTIVT  L DRSITYPEGKIEDIL+
Subjt:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV

Query:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMHLMEEVIA
        QV +FIFP DFIILDYEAD DVPIILGRPF K GRTLVDVY+GTITLRM +Q+V+F + DSMKY    E+CS ++ + E +A
Subjt:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMHLMEEVIA

XP_022951570.1 uncharacterized protein LOC111454344 [Cucurbita moschata]5.2e-6574.14Show/hide
Query:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV
        +  +K E  KVVSLNEEC A+ ++KIP KEKDPGSFTI VSIGG +LGRAL DLGAS+ L+PLSIYK LGIGEA PT VTL L DRSITYPEGKIEDIL+
Subjt:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV

Query:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTM
        QV +FIFP DFIILDYEAD DVPIILGRPF K GRTLVDVY+GTITLRM DQ+V+F++ DSMKY   +E+CST+
Subjt:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTM

XP_023521407.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo]1.7e-6370.39Show/hide
Query:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV
        +  +K E  KVV LNEEC A+ ++KIP KEKDPGSFTI +SIGG KLGRAL DLG+S+ L+PLSIYK LGIGEA PT VTL L DRS TYPEGKIEDIL+
Subjt:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV

Query:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMHLMEE
        QV +FIFP DFIILDYEAD DVPIILGRPF K GRTLVDVY+GTITLRM DQ+V+F++ DSMKY    E+CS ++ + E
Subjt:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMHLMEE

XP_023521781.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785639, partial [Cucurbita pepo subsp. pepo]4.9e-7163.76Show/hide
Query:  MARRYAVIQGQQALMRNFEVQLGQIANELKIRPQGTLEPEAERAIEVEEESKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRA
        MA+  AVIQ QQA +RN EVQ+GQ+ANEL+ RP    +         +  +  +K E  KVV LNEEC A+ ++KIP KEKDPGSFTI +SIGG KLGRA
Subjt:  MARRYAVIQGQQALMRNFEVQLGQIANELKIRPQGTLEPEAERAIEVEEESKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRA

Query:  LNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILVQVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMN
        L DLG+S+ L+PLSIYK LGIGEA PT VTL L DRS TYPEGKIEDIL+QV +F FP DFIILDYEAD DVPIILGRPF K GRTLVDVY+GTITLRM 
Subjt:  LNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILVQVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMN

Query:  DQEVKFSVYDSMKYLHELEQCSTMHLMEE
        DQ+V+F++ DSMKY    ++CS ++ + E
Subjt:  DQEVKFSVYDSMKYLHELEQCSTMHLMEE

XP_023522102.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp. pepo]1.7e-6370.39Show/hide
Query:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV
        +  +K E  KVV LNEEC A+ ++KIP KEKDPGSFTI +SIGG KLGRAL DLG+S+ L+PLSIYK LGIGEA PT VTL L DRS TYPEGKIEDIL+
Subjt:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV

Query:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMHLMEE
        QV +FIFP DFIILDYEAD DVPIILGRPF K GRTLVDVY+GTITLRM DQ+V+F++ DSMKY    E+CS ++ + E
Subjt:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMHLMEE

TrEMBL top hitse value%identityAlignment
A0A6J1EXR9 uncharacterized protein LOC1114392524.5e-6269.23Show/hide
Query:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV
        +  +K E  KVVSLNEE  A+ ++KIP KEKDPGS TI VSIGG +LGRAL DL AS+ L+PLSIYK LGIGEA PTIVT  L DRSITYPEGKIEDIL+
Subjt:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV

Query:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMHLMEEVIA
        QV +FIFP DFIILDYEAD DVPIILGRPF K GRTLVDVY+GTITLRM +Q+V+F + DSMKY    E+CS ++ + E +A
Subjt:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMHLMEEVIA

A0A6J1GJ68 uncharacterized protein LOC1114543442.5e-6574.14Show/hide
Query:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV
        +  +K E  KVVSLNEEC A+ ++KIP KEKDPGSFTI VSIGG +LGRAL DLGAS+ L+PLSIYK LGIGEA PT VTL L DRSITYPEGKIEDIL+
Subjt:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV

Query:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTM
        QV +FIFP DFIILDYEAD DVPIILGRPF K GRTLVDVY+GTITLRM DQ+V+F++ DSMKY   +E+CST+
Subjt:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTM

A0A6J1H7K8 uncharacterized protein LOC1114611674.5e-6267.03Show/hide
Query:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV
        +  +K E  KVV LNEEC A+ ++KIP KEKDPGSFTI +SIGG KLGRAL DLG+S+ L+PLSIYK LGIGEA PT VTL L DRS T+PEGKIEDIL+
Subjt:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV

Query:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMHLMEEVIA
        QV +FIFP DFIILDYEAD DVP ILGRPF K GRTLVDV++GTI LRMNDQ+++F + D+MKY   +E+CS ++ + E +A
Subjt:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMHLMEEVIA

A0A6J1H7K8 uncharacterized protein LOC1114611679.8e-0144.12Show/hide
Query:  MARRYAVIQGQQALMRNFEVQLGQIANELKIRPQGTLEPEAER-AIEVEEESKEKKVEPSKVVSLNEE
        MA+   VIQ QQA +RN EVQ+GQ+ANEL+ RP G L  + E    E  E+ +  ++   K +S  EE
Subjt:  MARRYAVIQGQQALMRNFEVQLGQIANELKIRPQGTLEPEAER-AIEVEEESKEKKVEPSKVVSLNEE

A0A6J1H7K8 uncharacterized protein LOC1114611671.0e-6172.09Show/hide
Query:  KKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILVQVG
        +K E  KVVSLNEEC A+ ++KIP KEKDPGSFTI VSIGG +LGRAL DLGA++ L+PLSIYK LGIGEA PT VTL L DRSITYPEGKIEDIL+QV 
Subjt:  KKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILVQVG

Query:  QFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMH
        +FIF  DFIILDYE D DVPIILGRPF K GRTLVDVY+GTITLRM+ Q+V+F++ DSMKY   +E+CS ++
Subjt:  QFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQCSTMH

A0A6J1I2C3 uncharacterized protein LOC1114692622.1e-5972.56Show/hide
Query:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV
        +  +K E  KVVSLNEEC A+ ++KIP KEKDPGSFTI VSIGG +LGRAL DLGAS+ L+PLSIYK LGIG+A PT VTL L DR ITYP+GKIEDIL 
Subjt:  SKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKLIPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILV

Query:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKY
        QV +FIFP+DFIILDYEAD DVPIIL RPF K GRTLVDVY+GTITLRM DQ+++F++ +SMKY
Subjt:  QVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGAAGATATGCAGTCATCCAAGGTCAACAAGCCTTAATGAGAAATTTTGAAGTTCAACTTGGACAAATAGCAAACGAATTAAAAATTAGGCCTCAAGGAACATT
AGAACCAGAGGCTGAAAGAGCAATTGAAGTTGAGGAAGAATCTAAAGAAAAGAAAGTCGAGCCCTCAAAGGTGGTATCTTTGAATGAGGAATGTAGGGCAGTGTTTAGGG
ACAAAATTCCTCACAAAGAAAAAGATCCAGGGTCATTCACAATTCTAGTTTCAATTGGAGGAAATAAGTTGGGAAGAGCCCTCAATGATTTGGGAGCAAGTGTAAAGCTC
ATACCTTTATCCATCTATAAAGGATTAGGCATAGGTGAAGCTCACCCTACAATAGTAACTCTCCATCTTACTGATAGATCCATAACTTATCCAGAAGGAAAAATTGAGGA
TATTCTGGTTCAAGTTGGACAGTTCATTTTTCCAGTAGACTTCATCATTTTAGACTATGAAGCTGATCAAGATGTTCCAATTATCTTAGGGAGACCCTTTTTTAAAAAAG
GTAGAACTCTTGTAGATGTTTACGAAGGCACAATTACTTTGAGAATGAATGACCAAGAGGTGAAGTTTAGTGTCTATGACTCCATGAAGTATCTTCATGAATTAGAACAA
TGCTCAACAATGCATCTGATGGAAGAAGTGATAGCTAAAGTCTTTGAAGAGAATATGTCAGCATGTTACAACTCAATTGGCAGGGAAAAGCTTGGAGATGAATCAGAATT
AATCAAGGACAAGCAGCACAGGGCAGAGGAAACTGGCTTAGCTAAGAGAAAAGAAATTTTTGAGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGAAGATATGCAGTCATCCAAGGTCAACAAGCCTTAATGAGAAATTTTGAAGTTCAACTTGGACAAATAGCAAACGAATTAAAAATTAGGCCTCAAGGAACATT
AGAACCAGAGGCTGAAAGAGCAATTGAAGTTGAGGAAGAATCTAAAGAAAAGAAAGTCGAGCCCTCAAAGGTGGTATCTTTGAATGAGGAATGTAGGGCAGTGTTTAGGG
ACAAAATTCCTCACAAAGAAAAAGATCCAGGGTCATTCACAATTCTAGTTTCAATTGGAGGAAATAAGTTGGGAAGAGCCCTCAATGATTTGGGAGCAAGTGTAAAGCTC
ATACCTTTATCCATCTATAAAGGATTAGGCATAGGTGAAGCTCACCCTACAATAGTAACTCTCCATCTTACTGATAGATCCATAACTTATCCAGAAGGAAAAATTGAGGA
TATTCTGGTTCAAGTTGGACAGTTCATTTTTCCAGTAGACTTCATCATTTTAGACTATGAAGCTGATCAAGATGTTCCAATTATCTTAGGGAGACCCTTTTTTAAAAAAG
GTAGAACTCTTGTAGATGTTTACGAAGGCACAATTACTTTGAGAATGAATGACCAAGAGGTGAAGTTTAGTGTCTATGACTCCATGAAGTATCTTCATGAATTAGAACAA
TGCTCAACAATGCATCTGATGGAAGAAGTGATAGCTAAAGTCTTTGAAGAGAATATGTCAGCATGTTACAACTCAATTGGCAGGGAAAAGCTTGGAGATGAATCAGAATT
AATCAAGGACAAGCAGCACAGGGCAGAGGAAACTGGCTTAGCTAAGAGAAAAGAAATTTTTGAGTCTTAG
Protein sequenceShow/hide protein sequence
MARRYAVIQGQQALMRNFEVQLGQIANELKIRPQGTLEPEAERAIEVEEESKEKKVEPSKVVSLNEECRAVFRDKIPHKEKDPGSFTILVSIGGNKLGRALNDLGASVKL
IPLSIYKGLGIGEAHPTIVTLHLTDRSITYPEGKIEDILVQVGQFIFPVDFIILDYEADQDVPIILGRPFFKKGRTLVDVYEGTITLRMNDQEVKFSVYDSMKYLHELEQ
CSTMHLMEEVIAKVFEENMSACYNSIGREKLGDESELIKDKQHRAEETGLAKRKEIFES