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Tan0004717 (gene) of Snake gourd v1 genome

Gene IDTan0004717
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationLG03:45675123..45675653
RNA-Seq ExpressionTan0004717
SyntenyTan0004717
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042193.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.9e-2145.06Show/hide
Query:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF
        MTV+EYEK +TELSKYA++++ +E  RCKRF +GLR EIRTPV AS+ W DF KLVE ALRVE+ L ++R  +        T+S  + R+R  +G +  F
Subjt:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF

Query:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTRQPSESRASSKKET
          GVS KG FK    G S S++ +G  G   R  GSS  M SA  S   +   +   S K +
Subjt:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTRQPSESRASSKKET

KAA0055470.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.9e-2146.71Show/hide
Query:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRG-DNRR
        + V+EYE K+TELS+YA  IVA+E+DRC+RF+ GLR E+RTPVTA ++W +FS+LVETALRVE+ +V+++    +  G  TT  +        RG + RR
Subjt:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRG-DNRR

Query:  FTQG--VSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTR
        FT G  VSG   FK   GG+   +  +G   +RQ Q+ SS    S   SRTR
Subjt:  FTQG--VSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTR

KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]2.6e-2246.3Show/hide
Query:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF
        MT+ EYEKK+TELS YA+ ++ +E +RCKRF++GLR EIRTPVTA ++W DFSKLVE ALRVE+ L ++R  +        T+S  + R+R  +  + RF
Subjt:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF

Query:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSR----TRQPSESRASS
          GVS +G FK    G S S++G+ G    QR  GSS  + S   S      R  SES  SS
Subjt:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSR----TRQPSESRASS

TYK08952.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.9e-2146.71Show/hide
Query:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRG-DNRR
        + V+EYE K+TELS+YA  IVA+E+DRC+RF+ GLR E+RTPVTA ++W +FS+LVETALRVE+ +V+++    +  G  TT  +        RG + RR
Subjt:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRG-DNRR

Query:  FTQG--VSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTR
        FT G  VSG   FK   GG+   +  +G   +RQ Q+ SS    S   SRTR
Subjt:  FTQG--VSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTR

TYK26763.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.9e-2145.06Show/hide
Query:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF
        MTV+EYEK +TELSKYA++++ +E  RCKRF +GLR EIRTPV AS+ W DF KLVE ALRVE+ L ++R  +        T+S  + R+R  +G +  F
Subjt:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF

Query:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTRQPSESRASSKKET
          GVS KG FK    G S S++ +G  G   R  GSS  M SA  S   +   +   S K +
Subjt:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTRQPSESRASSKKET

TrEMBL top hitse value%identityAlignment
A0A5A7TG44 DNA/RNA polymerases superfamily protein1.4e-2145.06Show/hide
Query:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF
        MTV+EYEK +TELSKYA++++ +E  RCKRF +GLR EIRTPV AS+ W DF KLVE ALRVE+ L ++R  +        T+S  + R+R  +G +  F
Subjt:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF

Query:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTRQPSESRASSKKET
          GVS KG FK    G S S++ +G  G   R  GSS  M SA  S   +   +   S K +
Subjt:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTRQPSESRASSKKET

A0A5A7UJV1 DNA/RNA polymerases superfamily protein1.4e-2146.71Show/hide
Query:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRG-DNRR
        + V+EYE K+TELS+YA  IVA+E+DRC+RF+ GLR E+RTPVTA ++W +FS+LVETALRVE+ +V+++    +  G  TT  +        RG + RR
Subjt:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRG-DNRR

Query:  FTQG--VSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTR
        FT G  VSG   FK   GG+   +  +G   +RQ Q+ SS    S   SRTR
Subjt:  FTQG--VSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTR

A0A5A7UZM6 Gag protease polyprotein-like protein1.3e-2246.3Show/hide
Query:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF
        MT+ EYEKK+TELS YA+ ++ +E +RCKRF++GLR EIRTPVTA ++W DFSKLVE ALRVE+ L ++R  +        T+S  + R+R  +  + RF
Subjt:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF

Query:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSR----TRQPSESRASS
          GVS +G FK    G S S++G+ G    QR  GSS  + S   S      R  SES  SS
Subjt:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSR----TRQPSESRASS

A0A5D3CCC7 DNA/RNA polymerases superfamily protein1.4e-2146.71Show/hide
Query:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRG-DNRR
        + V+EYE K+TELS+YA  IVA+E+DRC+RF+ GLR E+RTPVTA ++W +FS+LVETALRVE+ +V+++    +  G  TT  +        RG + RR
Subjt:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRG-DNRR

Query:  FTQG--VSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTR
        FT G  VSG   FK   GG+   +  +G   +RQ Q+ SS    S   SRTR
Subjt:  FTQG--VSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTR

A0A5D3DT34 DNA/RNA polymerases superfamily protein1.4e-2145.06Show/hide
Query:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF
        MTV+EYEK +TELSKYA++++ +E  RCKRF +GLR EIRTPV AS+ W DF KLVE ALRVE+ L ++R  +        T+S  + R+R  +G +  F
Subjt:  MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRF

Query:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTRQPSESRASSKKET
          GVS KG FK    G S S++ +G  G   R  GSS  M SA  S   +   +   S K +
Subjt:  TQGVSGKGRFKPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTRQPSESRASSKKET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTAATAGAATATGAGAAGAAATTCACAGAATTATCAAAGTATGCTAGCACTATTGTTGCAAACGAGACAGATCGATGCAAGAGGTTCGACGATGGTCTACGAAT
AGAGATCAGAACGCCTGTGACAGCAAGTTCGGAGTGGGTTGATTTCTCCAAGCTTGTTGAGACGGCATTACGGGTAGAGCGAAGACTGGTAGATGATAGAGTGGGAAAAG
GGATCGTAGGTGGTGGTCATACCACTTATTCTGTTGATTTACCACGAGACCGATTCCAACGAGGAGATAATAGGAGGTTCACTCAAGGAGTCTCAGGAAAAGGGAGATTT
AAACCCCATCGTGGTGGGCAGTCTACTTCAAGGACTGGCACAGGTGGACGTGGGGAAAGACAGAGGCAGCAGGGATCAAGTTTCCTTATGGGATCAGCGAGGGATTCCCG
TACAAGGCAACCCAGTGAGTCAAGAGCAAGTTCAAAGAAGGAAACCTTTGTGCAAAGACTTGTGGAAAGTATCATTGGGGTCGATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTAATAGAATATGAGAAGAAATTCACAGAATTATCAAAGTATGCTAGCACTATTGTTGCAAACGAGACAGATCGATGCAAGAGGTTCGACGATGGTCTACGAAT
AGAGATCAGAACGCCTGTGACAGCAAGTTCGGAGTGGGTTGATTTCTCCAAGCTTGTTGAGACGGCATTACGGGTAGAGCGAAGACTGGTAGATGATAGAGTGGGAAAAG
GGATCGTAGGTGGTGGTCATACCACTTATTCTGTTGATTTACCACGAGACCGATTCCAACGAGGAGATAATAGGAGGTTCACTCAAGGAGTCTCAGGAAAAGGGAGATTT
AAACCCCATCGTGGTGGGCAGTCTACTTCAAGGACTGGCACAGGTGGACGTGGGGAAAGACAGAGGCAGCAGGGATCAAGTTTCCTTATGGGATCAGCGAGGGATTCCCG
TACAAGGCAACCCAGTGAGTCAAGAGCAAGTTCAAAGAAGGAAACCTTTGTGCAAAGACTTGTGGAAAGTATCATTGGGGTCGATGTTTGA
Protein sequenceShow/hide protein sequence
MTVIEYEKKFTELSKYASTIVANETDRCKRFDDGLRIEIRTPVTASSEWVDFSKLVETALRVERRLVDDRVGKGIVGGGHTTYSVDLPRDRFQRGDNRRFTQGVSGKGRF
KPHRGGQSTSRTGTGGRGERQRQQGSSFLMGSARDSRTRQPSESRASSKKETFVQRLVESIIGVDV