; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004763 (gene) of Snake gourd v1 genome

Gene IDTan0004763
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane protein
Genome locationLG08:10219174..10219883
RNA-Seq ExpressionTan0004763
SyntenyTan0004763
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598865.1 hypothetical protein SDJN03_08643, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5389.23Show/hide
Query:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY
        VYLI+ILSLGLV+SIAEERFGFDAIR AAAL+ADRRLSGSILTA+FLLASSSIS EMEGLMDGVDHWM TTAAVTSNVA+GV DK+GLISLYGMVIISGY
Subjt:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY

Query:  VVTTVFYCECRKREFVRVENEEDRDHIVMV
        VVTTVFYCECRK++FVRVENEED DHIV V
Subjt:  VVTTVFYCECRKREFVRVENEEDRDHIVMV

KAG7029806.1 hypothetical protein SDJN02_08149, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-5388.46Show/hide
Query:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY
        VYLI+ILSLGLV+SIAEERFGFDAIR AAAL+ADRRLSGSILTA+FLLASSSIS EMEGLMDGVDHW+ TTAAVTSNVA+GV DK+GLISLYGMVIISGY
Subjt:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY

Query:  VVTTVFYCECRKREFVRVENEEDRDHIVMV
        VVTTVFYCECRK++FVRVENEED DHIV V
Subjt:  VVTTVFYCECRKREFVRVENEEDRDHIVMV

XP_022997441.1 uncharacterized protein LOC111492360 [Cucurbita maxima]4.5e-5489.23Show/hide
Query:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY
        VYLI++LSLGLV+SIAEERFGFDAIRAAAAL+ADRRLSGSILTA+FLLASSSIS EMEGLMDGVDHWM TTAAVTSNVA+GV DK+GLISLYGMVIISGY
Subjt:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY

Query:  VVTTVFYCECRKREFVRVENEEDRDHIVMV
        VVTTVFYCECRK++FVRVENEED DHIV V
Subjt:  VVTTVFYCECRKREFVRVENEEDRDHIVMV

XP_023546373.1 uncharacterized protein LOC111805502 [Cucurbita pepo subsp. pepo]1.0e-5389.23Show/hide
Query:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY
        VYLI+ILSLGLV+SIAEERFGFDAIR AAAL+ADRRLSGSILTA+FLLASSSIS EMEGLMDGVDHWM TTAAVTSNVA+GV DK+GLISLYGMVIISGY
Subjt:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY

Query:  VVTTVFYCECRKREFVRVENEEDRDHIVMV
        VVTTVFYCECRK++FVRVENEED DHIV V
Subjt:  VVTTVFYCECRKREFVRVENEEDRDHIVMV

XP_023546390.1 uncharacterized protein LOC111805514 [Cucurbita pepo subsp. pepo]1.0e-5389.23Show/hide
Query:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY
        VYLI+ILSLGLV+SIAEERFGFDAIR AAAL+ADRRLSGSILTA+FLLASSSIS EMEGLMDGVDHWM TTAAVTSNVA+GV DK+GLISLYGMVIISGY
Subjt:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY

Query:  VVTTVFYCECRKREFVRVENEEDRDHIVMV
        VVTTVFYCECRK++FVRVENEED DHIV V
Subjt:  VVTTVFYCECRKREFVRVENEEDRDHIVMV

TrEMBL top hitse value%identityAlignment
A0A0A0LV14 Uncharacterized protein1.4e-6172.33Show/hide
Query:  MSSPSPVTTLSPSSAFAPPSSSPSTPSPSSPHSPPSPPLSSPSTAS------------------------------VYLISILSLGLVLSIAEERFGFDA
        MSSPSPVTTLSPSS F PPSSSPSTP PSS  SPPSP L SPS  +                              VYLISI SLGLV+SIAEERFGFDA
Subjt:  MSSPSPVTTLSPSSAFAPPSSSPSTPSPSSPHSPPSPPLSSPSTAS------------------------------VYLISILSLGLVLSIAEERFGFDA

Query:  IRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGYVVTTVFYCECRKREFVRVENEEDR
        IR AA L+ADRRLSGSILTA+FL+ SS ISSEMEGLMDGVDHWM +TAAVT+NVAV VGDK+GLISLYGMVII GYVVTTVFYCECRKR+FVRVENEED 
Subjt:  IRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGYVVTTVFYCECRKREFVRVENEEDR

Query:  DHIVMV
        DHIVMV
Subjt:  DHIVMV

A0A5A7UQ45 Uncharacterized protein1.8e-5388.46Show/hide
Query:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY
        VYLISI+SLGLV+SIAEERFGFDAIR AAAL+ADRRLSGSILTA+FL ASS ISSEMEGLMDGVDHWM +TAAVT+NVAV VGDK+GLISLYGMVII GY
Subjt:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY

Query:  VVTTVFYCECRKREFVRVENEEDRDHIVMV
        VVTTVFYCECRKR+FVRVENEED DHIVMV
Subjt:  VVTTVFYCECRKREFVRVENEEDRDHIVMV

A0A5N6R735 Uncharacterized protein7.3e-2652Show/hide
Query:  STASVYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVI
        S   +YL+++LSLGLV+SI EER G+DAIR  + ++A RRLSG +L+ +F+L S +IS +++ +MDG+D  + +T +    VA GV DK+GLI LYG+V+
Subjt:  STASVYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVI

Query:  ISGYVVTTVFYCECRKREFVRVENE
        +  Y+VTTVFYCECRKR   R E E
Subjt:  ISGYVVTTVFYCECRKREFVRVENE

A0A6J1K518 uncharacterized protein LOC1114923602.2e-5489.23Show/hide
Query:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY
        VYLI++LSLGLV+SIAEERFGFDAIRAAAAL+ADRRLSGSILTA+FLLASSSIS EMEGLMDGVDHWM TTAAVTSNVA+GV DK+GLISLYGMVIISGY
Subjt:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY

Query:  VVTTVFYCECRKREFVRVENEEDRDHIVMV
        VVTTVFYCECRK++FVRVENEED DHIV V
Subjt:  VVTTVFYCECRKREFVRVENEEDRDHIVMV

A0A7N2L164 Uncharacterized protein1.5e-2351.2Show/hide
Query:  STASVYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVI
        S   VYL+++LSLGLV+SIAE+RFG++AIR  + L+A RR+SG +L+ +F+L S +I+ ++E ++DG D   +T+ A+   V  GV +K+GLI LYG+V+
Subjt:  STASVYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVI

Query:  ISGYVVTTVFYCECRKREFVRVENE
        +  Y+V TVFYCECRKR   RVE+E
Subjt:  ISGYVVTTVFYCECRKREFVRVENE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16850.1 unknown protein7.2e-1843.36Show/hide
Query:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY
        VY+++I  LG V+S+ EER+GFDAI+   AL+  RR++G  L  +F+  SS I   ME L   +D  +++ +   S V  G  D   L+ +YG  ++  Y
Subjt:  VYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGVDHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGY

Query:  VVTTVFYCECRKR
        VV TVFYCECRKR
Subjt:  VVTTVFYCECRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCCGAGTCCCGTCACGACGCTTTCTCCCTCCTCCGCCTTCGCGCCGCCTTCTTCCTCCCCATCTACGCCTTCTCCCTCCTCGCCGCACTCGCCTCCGTCTCC
TCCACTCTCCTCTCCTTCCACGGCAAGCGTTTATTTGATTTCGATTCTCAGTTTGGGCCTCGTCCTGTCGATTGCTGAGGAGAGATTTGGTTTCGATGCGATCCGTGCTG
CCGCCGCTCTGATCGCGGATCGGAGGCTCAGCGGCTCGATTTTGACGGCGATTTTCCTTCTCGCCTCGAGCTCGATCTCGTCGGAGATGGAGGGGCTTATGGACGGCGTC
GATCATTGGATGACGACTACGGCGGCGGTCACGTCGAATGTGGCGGTCGGCGTCGGCGATAAGCTTGGGTTAATTTCGCTGTACGGTATGGTGATTATTTCCGGGTATGT
GGTAACTACGGTTTTTTACTGCGAGTGTAGAAAGAGGGAATTTGTTAGGGTTGAAAATGAGGAGGATCGTGATCATATTGTCATGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTCCGAGTCCCGTCACGACGCTTTCTCCCTCCTCCGCCTTCGCGCCGCCTTCTTCCTCCCCATCTACGCCTTCTCCCTCCTCGCCGCACTCGCCTCCGTCTCC
TCCACTCTCCTCTCCTTCCACGGCAAGCGTTTATTTGATTTCGATTCTCAGTTTGGGCCTCGTCCTGTCGATTGCTGAGGAGAGATTTGGTTTCGATGCGATCCGTGCTG
CCGCCGCTCTGATCGCGGATCGGAGGCTCAGCGGCTCGATTTTGACGGCGATTTTCCTTCTCGCCTCGAGCTCGATCTCGTCGGAGATGGAGGGGCTTATGGACGGCGTC
GATCATTGGATGACGACTACGGCGGCGGTCACGTCGAATGTGGCGGTCGGCGTCGGCGATAAGCTTGGGTTAATTTCGCTGTACGGTATGGTGATTATTTCCGGGTATGT
GGTAACTACGGTTTTTTACTGCGAGTGTAGAAAGAGGGAATTTGTTAGGGTTGAAAATGAGGAGGATCGTGATCATATTGTCATGGTTTAA
Protein sequenceShow/hide protein sequence
MSSPSPVTTLSPSSAFAPPSSSPSTPSPSSPHSPPSPPLSSPSTASVYLISILSLGLVLSIAEERFGFDAIRAAAALIADRRLSGSILTAIFLLASSSISSEMEGLMDGV
DHWMTTTAAVTSNVAVGVGDKLGLISLYGMVIISGYVVTTVFYCECRKREFVRVENEEDRDHIVMV