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Tan0004776 (gene) of Snake gourd v1 genome

Gene IDTan0004776
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG04:66387205..66387426
RNA-Seq ExpressionTan0004776
SyntenyTan0004776
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-2375.34Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVL+MM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-2375.34Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVL+MM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-2375.34Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVL+MM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-2375.34Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVL+MM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-2375.34Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVL+MM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein8.2e-2475.34Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVL+MM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
A0A5A7TU93 Gag/pol protein8.2e-2475.34Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVL+MM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
A0A5A7TWB9 Gag/pol protein8.2e-2475.34Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVL+MM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
A0A5A7V4M1 Gag/pol protein8.2e-2475.34Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVL+MM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
A0A5D3CPJ6 Gag/pol protein8.2e-2475.34Show/hide
Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVL+MM HFN+AEMNG  IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCTTGCAGGAAATGTTTGGACAACAGTCCTTTCAGGTCCGGCATGACTCGCTCAAATACGTTTTCAACGCACGGATGAAAGAGGGGTCGTCTGTCCGTGAACA
CGTTCTAGACATGATGACCCATTTTAATCTGGCCGAGATGAACGGGGTTTCGATCGATGAGTCGAGTCAGGTCAGTTTTATTTTGGAGACTCTTCCGAAGAGCTTCCTTT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCCTTGCAGGAAATGTTTGGACAACAGTCCTTTCAGGTCCGGCATGACTCGCTCAAATACGTTTTCAACGCACGGATGAAAGAGGGGTCGTCTGTCCGTGAACA
CGTTCTAGACATGATGACCCATTTTAATCTGGCCGAGATGAACGGGGTTTCGATCGATGAGTCGAGTCAGGTCAGTTTTATTTTGGAGACTCTTCCGAAGAGCTTCCTTT
AG
Protein sequenceShow/hide protein sequence
MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLDMMTHFNLAEMNGVSIDESSQVSFILETLPKSFL