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Tan0004795 (gene) of Snake gourd v1 genome

Gene IDTan0004795
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG05:84110873..84111274
RNA-Seq ExpressionTan0004795
SyntenyTan0004795
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056934.1 calcium-binding protein PBP1 [Cucumis melo var. makuwa]3.6e-3371.96Show/hide
Query:  SRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST
        S NGVV F+DFFP M+EKLG+KGF++ELR GF LLMDKEKGVITA+SL K M F G  L++EE M M+REGDLDGDGALSEAEF ILM +LSPG M LS+
Subjt:  SRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST

Query:  PLFHQSH
          FHQSH
Subjt:  PLFHQSH

KAE8652697.1 hypothetical protein Csa_014317 [Cucumis sativus]5.2e-3268.81Show/hide
Query:  SRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST
        S   VV F+DFFP M+EKLG KGF++ELR GFRLLMDKEKGVITA+SL K M F G  L++EE M M++EGDLDGDGALSEAEF ILM +LSPG M LS+
Subjt:  SRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST

Query:  PLFHQSHQN
          FHQSH +
Subjt:  PLFHQSHQN

KAG6573227.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. sororia]4.6e-4484.68Show/hide
Query:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST
        MGSRNGVV FRDFFPAMVEKLG+KGFMEELR GFRLLMDKEKGVITA+SL  KM FLGLDEEEAMGM+REGDLDGDGALSEAEFC+LMF+LSPGLMQLST
Subjt:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST

Query:  PLFHQSHQNFR
         LF Q  + F+
Subjt:  PLFHQSHQNFR

KAG7012400.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-4585.59Show/hide
Query:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST
        MGSRNGVV FRDFFPAMVEKLG+KGFMEELR GFRLLMDKEKGVITA+SL  KMEFLGLDEEEAMGM+REGDLDGDGALSEAEFC+LMF+LSPGLMQLST
Subjt:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST

Query:  PLFHQSHQNFR
         LF Q  + F+
Subjt:  PLFHQSHQNFR

XP_038895967.1 calcium-binding protein PBP1-like [Benincasa hispida]8.1e-3372.48Show/hide
Query:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQL
        MGS NGVVFF+DFFP MVEKLG+KGFM+ELRSGF L+MDKEKG+IT +SL K M FLG  L++EE M M+REGDLDGDGAL+EAEFCILM RLSP     
Subjt:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQL

Query:  STPLFHQSH
           LFHQSH
Subjt:  STPLFHQSH

TrEMBL top hitse value%identityAlignment
A0A067GJU9 EF-hand domain-containing protein7.6e-2967.92Show/hide
Query:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGL---DEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQ
        M S N  V F DFFPAMVEKLG +GFM+EL +GFRLLMD++KG+IT +SL K    LGL    +EE M MLREGDLDGDGAL+E EFC LMFRLSPGLM+
Subjt:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGL---DEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQ

Query:  LSTPLF
         ST LF
Subjt:  LSTPLF

A0A0A0LV00 EF-hand domain-containing protein2.5e-3268.81Show/hide
Query:  SRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST
        S   VV F+DFFP M+EKLG KGF++ELR GFRLLMDKEKGVITA+SL K M F G  L++EE M M++EGDLDGDGALSEAEF ILM +LSPG M LS+
Subjt:  SRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST

Query:  PLFHQSHQN
          FHQSH +
Subjt:  PLFHQSHQN

A0A5A7UNY8 Calcium-binding protein PBP11.8e-3371.96Show/hide
Query:  SRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST
        S NGVV F+DFFP M+EKLG+KGF++ELR GF LLMDKEKGVITA+SL K M F G  L++EE M M+REGDLDGDGALSEAEF ILM +LSPG M LS+
Subjt:  SRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLST

Query:  PLFHQSH
          FHQSH
Subjt:  PLFHQSH

A0A6J1JUT4 calcium-binding protein KIC-like2.1e-3186.05Show/hide
Query:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGLDEEEAMGMLREGDLDGDGALSEAEFCI
        MGSRN VV FRDFFPAMVEKLG+KGFMEELR GFRLLMDKEKGVITA+SL  KM FLGL+EEEAMGM+ EGDLDGDGALSEAEF I
Subjt:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGLDEEEAMGMLREGDLDGDGALSEAEFCI

A0A7N2LV84 EF-hand domain-containing protein1.4e-3069.72Show/hide
Query:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGL---DEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQ
        MGSRNGVV F DFFPAMVEKLG +GFM+EL +GFRLLMD+EKGVIT QSL +    LGL    +EE M MLREGDLDGDGAL+E EFC LMFRLSPGLM+
Subjt:  MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGL---DEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQ

Query:  LSTPLFHQS
         S+ L  ++
Subjt:  LSTPLFHQS

SwissProt top hitse value%identityAlignment
O23320 Calmodulin-like protein 81.3e-0635.96Show/hide
Query:  NGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRL
        NG + F +F   M +KL      EEL+  F++    + G I+A  L   M  LG  L +EE   M++E DLDGDG ++  EF  +M  +
Subjt:  NGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRL

O81831 Calcium-binding protein KRP15.8e-1851.06Show/hide
Query:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFL----GLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLS
        F DF P M   LG +G + EL +GF LLMD+EKGVIT +SL +    +     L +E+   M++EGD D DGAL++ EFC+LMFRLSP LM+ S
Subjt:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFL----GLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLS

P41208 Centrin-23.5e-0738.2Show/hide
Query:  GVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLS
        G + F DF   M +K+  K   EE+   F+L  D E G I+ ++L +  + LG  L +EE   M+ E D DGDG +SE EF  +M + S
Subjt:  GVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRLS

Q9LSQ6 Calcium-binding protein PBP12.4e-1952.13Show/hide
Query:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFL----GLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLS
        F+DFFP M  KLG +G +EE+  GF LLMDK+KGVIT +SL +    +     L +++   M+ EGD D DGAL++ EFC+LMFRLSP LM+ S
Subjt:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFL----GLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLS

Q9ZPX9 Calcium-binding protein KIC5.3e-1950.55Show/hide
Query:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGLD---EEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQ
        + D  P M EK+ ++ F+ EL  GF LL D E+ +ITA+SL +    LG++   +E+A GM+REGDLDGDGAL++ EFC+LM RLSP +M+
Subjt:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGLD---EEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQ

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 41.6e-0737.21Show/hide
Query:  NGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILM
        NG + F +F   M +K+      EEL+  FR+    + G I+A  L   M  LG  L +EE   M+RE D+DGDG ++  EF  +M
Subjt:  NGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILM

AT2G46600.1 Calcium-binding EF-hand family protein3.7e-2050.55Show/hide
Query:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGLD---EEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQ
        + D  P M EK+ ++ F+ EL  GF LL D E+ +ITA+SL +    LG++   +E+A GM+REGDLDGDGAL++ EFC+LM RLSP +M+
Subjt:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGLD---EEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQ

AT4G14640.1 calmodulin 89.6e-0835.96Show/hide
Query:  NGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRL
        NG + F +F   M +KL      EEL+  F++    + G I+A  L   M  LG  L +EE   M++E DLDGDG ++  EF  +M  +
Subjt:  NGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLG--LDEEEAMGMLREGDLDGDGALSEAEFCILMFRL

AT4G27280.1 Calcium-binding EF-hand family protein4.1e-1951.06Show/hide
Query:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFL----GLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLS
        F DF P M   LG +G + EL +GF LLMD+EKGVIT +SL +    +     L +E+   M++EGD D DGAL++ EFC+LMFRLSP LM+ S
Subjt:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFL----GLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLS

AT5G54490.1 pinoid-binding protein 11.7e-2052.13Show/hide
Query:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFL----GLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLS
        F+DFFP M  KLG +G +EE+  GF LLMDK+KGVIT +SL +    +     L +++   M+ EGD D DGAL++ EFC+LMFRLSP LM+ S
Subjt:  FRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFL----GLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCAAGAAACGGGGTCGTTTTCTTCAGAGATTTCTTCCCTGCAATGGTGGAGAAACTGGGTCTAAAAGGGTTTATGGAGGAACTCAGATCTGGGTTTCGTTTGCT
GATGGATAAAGAAAAGGGCGTTATAACGGCACAGAGCTTAATAAAAAAAATGGAGTTTTTGGGATTGGATGAAGAAGAAGCTATGGGGATGCTGAGAGAAGGGGATTTGG
ATGGAGATGGAGCTTTGAGTGAAGCTGAATTTTGCATTCTCATGTTCAGACTTAGCCCTGGATTGATGCAATTATCTACACCTTTATTTCACCAATCTCATCAAAACTTT
AGGAAATAG
mRNA sequenceShow/hide mRNA sequence
TCCACTCCTCCTTCCTTAATAAATACCCTTCAAGAAAATAAAATTATCTCAAAGTGTCCACAAATGGGATCAAGAAACGGGGTCGTTTTCTTCAGAGATTTCTTCCCTGC
AATGGTGGAGAAACTGGGTCTAAAAGGGTTTATGGAGGAACTCAGATCTGGGTTTCGTTTGCTGATGGATAAAGAAAAGGGCGTTATAACGGCACAGAGCTTAATAAAAA
AAATGGAGTTTTTGGGATTGGATGAAGAAGAAGCTATGGGGATGCTGAGAGAAGGGGATTTGGATGGAGATGGAGCTTTGAGTGAAGCTGAATTTTGCATTCTCATGTTC
AGACTTAGCCCTGGATTGATGCAATTATCTACACCTTTATTTCACCAATCTCATCAAAACTTTAGGAAATAG
Protein sequenceShow/hide protein sequence
MGSRNGVVFFRDFFPAMVEKLGLKGFMEELRSGFRLLMDKEKGVITAQSLIKKMEFLGLDEEEAMGMLREGDLDGDGALSEAEFCILMFRLSPGLMQLSTPLFHQSHQNF
RK