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Tan0004840 (gene) of Snake gourd v1 genome

Gene IDTan0004840
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG09:50644941..50648529
RNA-Seq ExpressionTan0004840
SyntenyTan0004840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038300.1 hypothetical protein E6C27_scaffold270G001680 [Cucumis melo var. makuwa]1.2e-1252.38Show/hide
Query:  VEGAQ-EGYGNMNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IH
        V+GAQ EGYGNMNIDQ MMNF PP++HD+SSQ LF  + A +G+LMSEDNA N                 N YQFA       SD+FPLA  PT    +H
Subjt:  VEGAQ-EGYGNMNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IH

Query:  LSNAQ
        +SNAQ
Subjt:  LSNAQ

KAG6590081.1 hypothetical protein SDJN03_15504, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1250Show/hide
Query:  EGAQEGYGNMNIDQDMMNFIPPSHHDA-SSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFAA----SDHFPL---APMPTPIHLSN
        E +     N+ ID    N       +A S+ ++  S  A  GSLMSEDNAYNNG QQAG+   +SYW +NGYQFAA    S+HFPL   A  PT IHLSN
Subjt:  EGAQEGYGNMNIDQDMMNFIPPSHHDA-SSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFAA----SDHFPL---APMPTPIHLSN

Query:  AQ
        AQ
Subjt:  AQ

KAG7023746.1 hypothetical protein SDJN02_14772, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-1350.98Show/hide
Query:  EGAQEGYGNMNIDQDMMNFIPPSHHDA-SSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFAA----SDHFPL---APMPTPIHLSN
        E +     N+ ID    N       +A S+ ++  S  A  GSLMSEDNAYNNG QQAG+ A +SYW +NGYQFAA    S+HFPL   A  PT IHLSN
Subjt:  EGAQEGYGNMNIDQDMMNFIPPSHHDA-SSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFAA----SDHFPL---APMPTPIHLSN

Query:  AQ
        AQ
Subjt:  AQ

TYK19853.1 hypothetical protein E5676_scaffold811G00650 [Cucumis melo var. makuwa]1.2e-1252.38Show/hide
Query:  VEGAQ-EGYGNMNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IH
        V+GAQ EGYGNMNIDQ MMNF PP++HD+SSQ LF  + A +G+LMSEDNA N                 N YQFA       SD+FPLA  PT    +H
Subjt:  VEGAQ-EGYGNMNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IH

Query:  LSNAQ
        +SNAQ
Subjt:  LSNAQ

XP_008443727.1 PREDICTED: uncharacterized protein LOC103487245 isoform X1 [Cucumis melo]1.4e-0848.96Show/hide
Query:  MNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IHLSNAQVT
        MNIDQ MMNF PP++HD+SSQ LF  + A +G+LMSEDNA N                 N YQFA       SD+FPLA  PT    +H+SNAQ T
Subjt:  MNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IHLSNAQVT

TrEMBL top hitse value%identityAlignment
A0A0A0M393 Uncharacterized protein2.8e-2355.24Show/hide
Query:  MVEVSTPHVS-QHSGTSLSNQTSPAASSVHLFAAVSVEGAQ-EGYGNMNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAE
        M+EVSTP VS QHSGT  S  TSPAASS  LFA+ +V  AQ EGYGNMN DQ MMNF PP++HD+SSQI F  + A +G+LMSEDNAYN           
Subjt:  MVEVSTPHVS-QHSGTSLSNQTSPAASSVHLFAAVSVEGAQ-EGYGNMNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAE

Query:  TSYWALNGYQFA------ASDHFPLAPMPTP---IHLSNAQVT
              N YQFA       SD+FPLA  PT     H SN QVT
Subjt:  TSYWALNGYQFA------ASDHFPLAPMPTP---IHLSNAQVT

A0A1S3B887 uncharacterized protein LOC103487245 isoform X16.7e-0948.96Show/hide
Query:  MNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IHLSNAQVT
        MNIDQ MMNF PP++HD+SSQ LF  + A +G+LMSEDNA N                 N YQFA       SD+FPLA  PT    +H+SNAQ T
Subjt:  MNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IHLSNAQVT

A0A1S3B8P4 uncharacterized protein LOC103487245 isoform X26.7e-0948.96Show/hide
Query:  MNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IHLSNAQVT
        MNIDQ MMNF PP++HD+SSQ LF  + A +G+LMSEDNA N                 N YQFA       SD+FPLA  PT    +H+SNAQ T
Subjt:  MNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IHLSNAQVT

A0A5A7T4L0 Uncharacterized protein5.8e-1352.38Show/hide
Query:  VEGAQ-EGYGNMNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IH
        V+GAQ EGYGNMNIDQ MMNF PP++HD+SSQ LF  + A +G+LMSEDNA N                 N YQFA       SD+FPLA  PT    +H
Subjt:  VEGAQ-EGYGNMNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IH

Query:  LSNAQ
        +SNAQ
Subjt:  LSNAQ

A0A5D3D8K2 Uncharacterized protein5.8e-1352.38Show/hide
Query:  VEGAQ-EGYGNMNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IH
        V+GAQ EGYGNMNIDQ MMNF PP++HD+SSQ LF  + A +G+LMSEDNA N                 N YQFA       SD+FPLA  PT    +H
Subjt:  VEGAQ-EGYGNMNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA------ASDHFPLAPMPTP---IH

Query:  LSNAQ
        +SNAQ
Subjt:  LSNAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAAGTGAGCACTCCACATGTTAGTCAACATTCAGGGACTTCTCTCTCCAATCAAACTTCCCCAGCAGCTTCTTCTGTACACCTCTTTGCTGCAGTAAGTGTGGA
AGGAGCACAAGAAGGCTATGGGAATATGAACATTGATCAAGACATGATGAACTTCATCCCTCCAAGTCACCATGATGCTTCTTCACAAATCTTGTTCTCGTCTCAGGGTG
CAGCTATGGGAAGTTTGATGAGTGAGGATAATGCATACAATAATGGAAGCCAACAGGCAGGAATGAGTGCTGAGACTTCATATTGGGCTCTCAATGGCTATCAGTTTGCA
GCTTCTGATCACTTCCCTTTGGCTCCTATGCCCACTCCCATCCACCTTTCCAATGCTCAGGTCACCCCCTTAACTTCTCCCCCAATACTATATTATTGCATGGATAGTTA
G
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAAGTGAGCACTCCACATGTTAGTCAACATTCAGGGACTTCTCTCTCCAATCAAACTTCCCCAGCAGCTTCTTCTGTACACCTCTTTGCTGCAGTAAGTGTGGA
AGGAGCACAAGAAGGCTATGGGAATATGAACATTGATCAAGACATGATGAACTTCATCCCTCCAAGTCACCATGATGCTTCTTCACAAATCTTGTTCTCGTCTCAGGGTG
CAGCTATGGGAAGTTTGATGAGTGAGGATAATGCATACAATAATGGAAGCCAACAGGCAGGAATGAGTGCTGAGACTTCATATTGGGCTCTCAATGGCTATCAGTTTGCA
GCTTCTGATCACTTCCCTTTGGCTCCTATGCCCACTCCCATCCACCTTTCCAATGCTCAGGTCACCCCCTTAACTTCTCCCCCAATACTATATTATTGCATGGATAGTTA
G
Protein sequenceShow/hide protein sequence
MVEVSTPHVSQHSGTSLSNQTSPAASSVHLFAAVSVEGAQEGYGNMNIDQDMMNFIPPSHHDASSQILFSSQGAAMGSLMSEDNAYNNGSQQAGMSAETSYWALNGYQFA
ASDHFPLAPMPTPIHLSNAQVTPLTSPPILYYCMDS