; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004846 (gene) of Snake gourd v1 genome

Gene IDTan0004846
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG03:79737198..79737995
RNA-Seq ExpressionTan0004846
SyntenyTan0004846
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439658.1 PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo]1.2e-14896.98Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAVKLSPNAPE+QG GR++MRK+A+KPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL+DPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

XP_008439659.2 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo]4.7e-14896.98Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAVKLSPNAPE+QG GR++MRK+A+K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

XP_022926344.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata]5.2e-14796.6Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGK +KLSPNAP+VQG+ R+SMRK+ASK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

XP_038882052.1 chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]8.0e-14897.36Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAVKLSPN PE+QGNGRVSMRK+ASK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

XP_038882053.1 chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]3.6e-14897.36Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAVKLSPNAPE+QGNGR+SMRK+ASK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

TrEMBL top hitse value%identityAlignment
A0A1S3AZW8 Chlorophyll a-b binding protein, chloroplastic6.0e-14996.98Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAVKLSPNAPE+QG GR++MRK+A+KPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL+DPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A1S3AZZ0 Chlorophyll a-b binding protein, chloroplastic2.3e-14896.98Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAVKLSPNAPE+QG GR++MRK+A+K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A5A7UBM9 Chlorophyll a-b binding protein, chloroplastic6.0e-14996.98Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAVKLSPNAPE+QG GR++MRK+A+KPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL+DPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A5D3CNU3 Chlorophyll a-b binding protein, chloroplastic2.3e-14896.98Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGKAVKLSPNAPE+QG GR++MRK+A+K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A6J1KNR2 Chlorophyll a-b binding protein, chloroplastic2.5e-14796.6Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSPSLAGK +KLSPNAP+VQG+ R+SMRK+ASK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

SwissProt top hitse value%identityAlignment
P07369 Chlorophyll a-b binding protein 3C, chloroplastic1.4e-14291.39Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSA--SKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        MA STMALSS + AGKAVKLSP++ E+ GNGRV+MRK+A  +KP SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSA--SKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
        VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+ DP+YPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P08221 Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment)3.0e-14596.08Show/hide
Query:  PSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL
        P+LAG+AVKLSPNAPE+QGN + +MRK+ASK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL
Subjt:  PSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL

Query:  GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELK
        GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLADDPEAFAELK
Subjt:  GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELK

Query:  VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P09756 Chlorophyll a-b binding protein 3, chloroplastic5.6e-14494.32Show/hide
Query:  AASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
        AAS+MALSSPSLAGKAVKL P+APEV   GRVSMRK+ +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Subjt:  AASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH

Query:  SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLAD
        SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLAD
Subjt:  SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLAD

Query:  DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA PVNNNAWAYATNFVPGK
Subjt:  DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P27493 Chlorophyll a-b binding protein 21, chloroplastic2.3e-14592.08Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAA+TMALSSPS AG+AVKLSP+APE+ GNGRVSMRK+ +KPV+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA
        H RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGE+ DP+YPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        +DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

P27495 Chlorophyll a-b binding protein 40, chloroplastic9.5e-14492.13Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSAS--KPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        MAASTMALSSPS AGKAVKLSP++ E+ GNG+V+MRK+AS  K VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSAS--KPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
        VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AGGPLGE+ DP+YPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 31.5e-13688.76Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MAASTMALSSP+ AGKAV LSP A EV G+GRV+MRK+ +KP   SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT1G29920.1 chlorophyll A/B-binding protein 21.5e-13688.76Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MAASTMALSSP+ AGKAV LSP A EV G+GRV+MRK+ +KP   SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT1G29930.1 chlorophyll A/B binding protein 14.0e-13789.14Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MAASTMALSSP+ AGKAVKLSP A EV G+GRV+MRK+ +KP   SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT2G34420.1 photosystem II light harvesting complex gene B1B23.7e-13588.39Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA+STMALSSP+ AGKAVK  P A +V G+GRV+MRK+ +KP   SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B11.8e-13789.1Show/hide
Query:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASTMALSSP+L GKAVKLSP A EV G GR++MRK++     SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVI
Subjt:  MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPLGL
        HSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGL
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPLGL

Query:  ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
        A DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCTCCACAATGGCTCTCTCATCCCCATCTTTGGCTGGCAAGGCCGTCAAGCTCTCCCCCAACGCGCCTGAGGTTCAGGGCAATGGAAGAGTCAGCATGAGGAA
GAGCGCCAGCAAGCCAGTTTCCTCTGGCAGCCCATGGTACGGTCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACCTGACCGGAGAATTCC
CCGGTGACTACGGCTGGGACACTGCCGGACTTTCAGCCGACCCCGAGACGTTCGCCAAGAACCGTGAGCTGGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTG
GGGTGTGTCTTCCCGGAGCTTCTGTCCCGCAACGGCGTGAAGTTTGGTGAGGCAGTGTGGTTCAAGGCTGGTTCTCAGATCTTCAGCGAGGGAGGATTGGACTATTTGGG
CAACCCCAGCTTGGTCCATGCACAGAGCATTTTGGCAATCTGGGCCTGCCAGGTCGTGCTGATGGGCGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCGCTCGGGGAGA
TAACAGACCCAATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCTGATGACCCAGAGGCCTTCGCTGAGCTGAAGGTGAAGGAGCTCAAGAATGGAAGGCTGGCC
ATGTTCTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTTACTGGAAAGGGTCCTTTGGAGAACTTGGCCGACCACCTTGCTGATCCTGTCAACAACAATGCTTGGGCCTA
TGCCACAAACTTTGTTCCTGGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCTCCACAATGGCTCTCTCATCCCCATCTTTGGCTGGCAAGGCCGTCAAGCTCTCCCCCAACGCGCCTGAGGTTCAGGGCAATGGAAGAGTCAGCATGAGGAA
GAGCGCCAGCAAGCCAGTTTCCTCTGGCAGCCCATGGTACGGTCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACCTGACCGGAGAATTCC
CCGGTGACTACGGCTGGGACACTGCCGGACTTTCAGCCGACCCCGAGACGTTCGCCAAGAACCGTGAGCTGGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTG
GGGTGTGTCTTCCCGGAGCTTCTGTCCCGCAACGGCGTGAAGTTTGGTGAGGCAGTGTGGTTCAAGGCTGGTTCTCAGATCTTCAGCGAGGGAGGATTGGACTATTTGGG
CAACCCCAGCTTGGTCCATGCACAGAGCATTTTGGCAATCTGGGCCTGCCAGGTCGTGCTGATGGGCGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCGCTCGGGGAGA
TAACAGACCCAATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCTGATGACCCAGAGGCCTTCGCTGAGCTGAAGGTGAAGGAGCTCAAGAATGGAAGGCTGGCC
ATGTTCTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTTACTGGAAAGGGTCCTTTGGAGAACTTGGCCGACCACCTTGCTGATCCTGTCAACAACAATGCTTGGGCCTA
TGCCACAAACTTTGTTCCTGGAAAGTGA
Protein sequenceShow/hide protein sequence
MAASTMALSSPSLAGKAVKLSPNAPEVQGNGRVSMRKSASKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL
GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLA
MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK