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Tan0004889 (gene) of Snake gourd v1 genome

Gene IDTan0004889
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG07:73804923..73805207
RNA-Seq ExpressionTan0004889
SyntenyTan0004889
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025373.1 hypothetical protein E6C27_scaffold1204G00600 [Cucumis melo var. makuwa]6.1e-2664.89Show/hide
Query:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWSTVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN
        MKIQF FF AI++LLAN HHLQ CRTMK D++KWS ++QQSLQRAPVPPS R+G TNIPVP+GQ+AF GK+T  PA   P+++    G+ LKTN
Subjt:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWSTVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN
KAG6571501.1 hypothetical protein SDJN03_28229, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2666.32Show/hide
Query:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS-TVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN
        MKIQF F LAI+++LAN H LQ CRTMK+DRQKWS  +LQQSL+R PVPPSA+NGGT IP  +GQRAFVGK+T +PAH+Y + VP  FG+ + TN
Subjt:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS-TVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN
KAG6571503.1 hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2869.47Show/hide
Query:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS-TVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN
        MKIQF F LAI+++LAN H LQ CRTMK+DRQKWS  +LQQSLQRAPVPPSA+NGGT IPVP+GQR+FVGK+T +PAH+Y + VP  FG+ + TN
Subjt:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS-TVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN
KAG6571504.1 hypothetical protein SDJN03_28232, partial [Cucurbita argyrosperma subsp. sororia]8.0e-2666.67Show/hide
Query:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS-TVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGM-PLKTN
        MKIQF F LAI+++LAN H LQ CRTMK+D QKWS  +LQQSLQRAPVPP+A+NGGT IP P+GQRAFVGK+T +PAH+Y + VP   G+  +KTN
Subjt:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS-TVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGM-PLKTN
KAG6571505.1 hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3174.47Show/hide
Query:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWSTVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN
        MKIQF F LAIV+LLAN H LQ CRTMK DRQKWS +LQQSLQRAPVPPSA+NGGT IPVP+GQRAFVGK+T +PAH+Y + VP  FG+ +KTN
Subjt:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWSTVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN
TrEMBL top hitse value%identityAlignment
A0A0A0LCY5 Uncharacterized protein1.2e-2271.95Show/hide
Query:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS---TVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTY
        MKIQF F LAI++LLAN HHLQ CRT+K D+Q WS    +LQQSLQR PVPPSA+NG TNIPVPVGQRAF GKT+AA A  Y
Subjt:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS---TVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTY
A0A5D3B777 Uncharacterized protein3.0e-2664.89Show/hide
Query:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWSTVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN
        MKIQF FF AI++LLAN HHLQ CRTMK D++KWS ++QQSLQRAPVPPS R+G TNIPVP+GQ+AF GK+T  PA   P+++    G+ LKTN
Subjt:  MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWSTVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCCAATTTTTTTTCTTTTTAGCCATTGTTCTTCTTCTTGCCAACATTCATCACCTCCAAGGTTGCAGAACCATGAAACAGGATCGACAAAAGTGGTCGACGGT
GCTTCAACAGTCTCTGCAGAGGGCCCCGGTTCCTCCCTCTGCCAGAAATGGTGGCACCAATATTCCGGTGCCGGTCGGGCAAAGGGCCTTTGTCGGAAAAACCACGGCGG
CGCCGGCACACACCTACCCAAATCATGTACCGGCTTCTTTTGGTATGCCCTTGAAGACAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATCCAATTTTTTTTCTTTTTAGCCATTGTTCTTCTTCTTGCCAACATTCATCACCTCCAAGGTTGCAGAACCATGAAACAGGATCGACAAAAGTGGTCGACGGT
GCTTCAACAGTCTCTGCAGAGGGCCCCGGTTCCTCCCTCTGCCAGAAATGGTGGCACCAATATTCCGGTGCCGGTCGGGCAAAGGGCCTTTGTCGGAAAAACCACGGCGG
CGCCGGCACACACCTACCCAAATCATGTACCGGCTTCTTTTGGTATGCCCTTGAAGACAAACTAA
Protein sequenceShow/hide protein sequence
MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWSTVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN