CuGenDBv2

Gene ID	Tan0004913
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Protein FAR1-RELATED SEQUENCE 4
Genome location	LG03:56415072..56428099
RNA-Seq Expression	Tan0004913
Synteny	Tan0004913
Gene Ontology terms	GO:0005488 - binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039579.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]

4.4e-33

41.85

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Query:  HQNLRPSDELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALIS
        H ++    ++W+VRKF   H C +D+V+NDH+Q TS +VS+                                YDK WRGRE  +N IRG+ E+SYA++S
Subjt:  HQNLRPSDELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALIS

Query:  GFAANLIVKNP-SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS
         F+  LI  NP +D   RF ++FM++A SID W++C+ VISVD A +K+   GT ++  T DGNS+I PLAF++VDSE+DL  S
Subjt:  GFAANLIVKNP-SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]

3.2e-31

41.76

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Query:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV
        ++W+VRKF   H C +D+V+NDH+Q TS +VS+                                YDK WRGRE  +N IRG+PE+SYA++S F+  LI 
Subjt:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV

Query:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS
         NP       +D   RF ++FM++A SID W++C+ VISVD A +K+   GT+++ CT D NS+I P AF +VDSEN L  S
Subjt:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]

2.3e-34

43.41

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Query:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV
        ++W+VRKF   H C +D+V+NDH+Q TS +VS+                                YDK WRGRE  +N IRG+PE+SYA++S F+  LI 
Subjt:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV

Query:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS
         NP       +D   RF ++FM++A SID W++C+ VISVD A +K+   GT+++ CT DGNS+I PLAF++VDSENDL  S
Subjt:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]

3.4e-33

42.31

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Query:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV
        ++W+VRKF+  H C +D+V+NDH+Q TS +VS+                                YDK W GRE  +N IRG+PE+SYA++S F+  LI 
Subjt:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV

Query:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS
         NP       +D   RF ++FM++A SID W++C+ VISVD A +K+   GT+++ CT DGNS+I PL F++VDSENDL  S
Subjt:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS

XP_016901440.1 PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]

4.0e-34

43.32

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Query:  LRPSDELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFA
        L+ SD +W+VRKF   H C +D+V+NDH+Q TS +VS+                                YDK WRGRE  +N IRG+P++SY ++S F+
Subjt:  LRPSDELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFA

Query:  ANLIVKNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS
          LI  NP       +D   RF ++FM++ATSID W++C+ VISVD A +K+   GT+++ CT DGNS+I PLAF++VDSENDL  S
Subjt:  ANLIVKNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C300 uncharacterized protein LOC103495899

1.6e-33

42.31

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Query:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV
        ++W+VRKF+  H C +D+V+NDH+Q TS +VS+                                YDK W GRE  +N IRG+PE+SYA++S F+  LI 
Subjt:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV

Query:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS
         NP       +D   RF ++FM++A SID W++C+ VISVD A +K+   GT+++ CT DGNS+I PL F++VDSENDL  S
Subjt:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS

A0A1S4E0D5 uncharacterized protein LOC107991253

1.9e-34

43.32

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Query:  LRPSDELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFA
        L+ SD +W+VRKF   H C +D+V+NDH+Q TS +VS+                                YDK WRGRE  +N IRG+P++SY ++S F+
Subjt:  LRPSDELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFA

Query:  ANLIVKNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS
          LI  NP       +D   RF ++FM++ATSID W++C+ VISVD A +K+   GT+++ CT DGNS+I PLAF++VDSENDL  S
Subjt:  ANLIVKNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS

A0A5A7TEC9 Protein FAR1-RELATED SEQUENCE 2-like

2.1e-33

41.85

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Query:  HQNLRPSDELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALIS
        H ++    ++W+VRKF   H C +D+V+NDH+Q TS +VS+                                YDK WRGRE  +N IRG+ E+SYA++S
Subjt:  HQNLRPSDELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALIS

Query:  GFAANLIVKNP-SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS
         F+  LI  NP +D   RF ++FM++A SID W++C+ VISVD A +K+   GT ++  T DGNS+I PLAF++VDSE+DL  S
Subjt:  GFAANLIVKNP-SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like

1.5e-31

40.66

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Query:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV
        ++W++RKF   H C +D+V+NDH+Q TS +VS+                                YDK WRGRE  +N I+G+PE+SYA++  F+  LI 
Subjt:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV

Query:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS
         NP       +D   RF ++FM++  SID W++ + VISVD A +K+   GT+++ CT DGNS+I PLAF++VDSENDL  S
Subjt:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS

A0A5D3E198 MuDRA-like transposase

1.1e-34

43.41

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Query:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV
        ++W+VRKF   H C +D+V+NDH+Q TS +VS+                                YDK WRGRE  +N IRG+PE+SYA++S F+  LI 
Subjt:  ELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSD--------------------------------YDKTWRGREKVVNRIRGSPEESYALISGFAANLIV

Query:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS
         NP       +D   RF ++FM++A SID W++C+ VISVD A +K+   GT+++ CT DGNS+I PLAF++VDSENDL  S
Subjt:  KNP-------SDVNDRFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49920.1 MuDR family transposase

4.2e-05

22.29

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Query:  FNLKKIIQHQNLRPSDEL--WVVRKF------VSEHSCCIDIVRNDHRQTTSTMVSDYDKTWRGREKVVNRIRGSPEESYALISGFAANLIVKNPSDVND
        F ++++++ Q    + EL  W  +KF      V EH C   +V +   +       D+D+++R    ++ ++      S  L+  +  + +  +P   + 
Subjt:  FNLKKIIQHQNLRPSDEL--WVVRKF------VSEHSCCIDIVRNDHRQTTSTMVSDYDKTWRGREKVVNRIRGSPEESYALISGFAANLIVKNPSDVND

Query:  RFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSI
         F   F + + SI G+ HC  +I VD   L       ++    FD  ++ +PLAF++
Subjt:  RFPYFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSI

Sequences

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CDS sequence

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ATGTGCATGAGATATCAAATACAACCGGTGTTGGGAGGATGTTTTTTTAATCTAAAAAAAATCATCCAACATCAAAATCTTAGGCCCTCAGACGAACTGTGGGTTGTTAG
GAAATTCGTGAGTGAGCACTCATGCTGCATCGACATTGTGCGCAATGATCACCGCCAAACGACCTCAACCATGGTAAGTGATTACGACAAAACATGGAGGGGGAGAGAGA
AGGTCGTTAATCGTATTCGAGGGTCTCCAGAAGAGTCATATGCTCTCATTTCTGGGTTTGCAGCCAACCTCATTGTAAAAAATCCATCTGATGTGAATGATAGATTCCCC
TATTTCTTCATGAGCATAGCAACATCGATAGATGGGTGGCACCATTGTTTACACGTAATATCTGTCGATGTGGCCTTTTTGAAAAGTATGATGGGTGGAACAGTCCTCAC
AGTATGCACGTTTGACGGAAATTCAAAAATTTATCCATTGGCATTTTCAATAGTGGACTCTGAAAATGATCTTCATGGGAGTGGTTCTTCCGAAATTTGA

mRNA sequence

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Protein sequence

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MCMRYQIQPVLGGCFFNLKKIIQHQNLRPSDELWVVRKFVSEHSCCIDIVRNDHRQTTSTMVSDYDKTWRGREKVVNRIRGSPEESYALISGFAANLIVKNPSDVNDRFP
YFFMSIATSIDGWHHCLHVISVDVAFLKSMMGGTVLTVCTFDGNSKIYPLAFSIVDSENDLHGSGSSEI

Tan0004913 (gene) of Snake gourd v1 genome