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Tan0004915 (gene) of Snake gourd v1 genome

Gene IDTan0004915
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:2266828..2268983
RNA-Seq ExpressionTan0004915
SyntenyTan0004915
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576732.1 hypothetical protein SDJN03_24306, partial [Cucurbita argyrosperma subsp. sororia]5.2e-4682.79Show/hide
Query:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQFS+T PFWTNEKHMHFLNSMEASFVRSMFKNR+   RLRLDR L DTADSTLDSPQK+RK H    G R+DGRSSRRSRRI SLP+TSIQDQVV
Subjt:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKRAVEDEDERDHPMSPIN
        PQME+RAVEDEDERDHPMSP+N
Subjt:  PQMEKRAVEDEDERDHPMSPIN

XP_004140781.1 uncharacterized protein LOC101217506 [Cucumis sativus]1.4e-4682.79Show/hide
Query:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNR-HR--LRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQF++TGP WTNEKHMHFLNS+EASFVRSMF+NR HR  LRLDRLLPDTADSTLDSP    KNHPT G  RI+GRS+RRSRRISS PYTS QDQVV
Subjt:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNR-HR--LRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKRAVEDEDERDHPMSPIN
        PQMEKRAVEDEDERDHPMSP+N
Subjt:  PQMEKRAVEDEDERDHPMSPIN

XP_022923139.1 uncharacterized protein LOC111430892 isoform X1 [Cucurbita moschata]6.8e-4682.79Show/hide
Query:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQFSET PFWTNEKHMHFLNSMEASFVRSMFKNR+   RL+LDR L DTADSTLDSPQK+RK H    G R+DGRSSRRSRRI SLP+TSIQDQVV
Subjt:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKRAVEDEDERDHPMSPIN
        PQME+RAVEDEDERDHPMSP+N
Subjt:  PQMEKRAVEDEDERDHPMSPIN

XP_022984699.1 uncharacterized protein LOC111482903 isoform X1 [Cucurbita maxima]5.2e-4682.79Show/hide
Query:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQFSET PFWTNEKHMHFLNSMEASFVRSMFKNR+   RLRLDR L DTADSTLDSPQK+RK H    G R+DGRSSRRSRRI SLP+TSIQDQVV
Subjt:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKRAVEDEDERDHPMSPIN
        PQME+RAVEDEDERDHP+SP+N
Subjt:  PQMEKRAVEDEDERDHPMSPIN

XP_038882732.1 uncharacterized protein LOC120073889 isoform X1 [Benincasa hispida]4.0e-4683.06Show/hide
Query:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH----RLRLDRLLPDTADSTLDSPQK-DRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQ
        M SHVQFSETGPFWTNEKHMHFLNSMEASFV+SMF+NR+    RLRLDR LPDTADSTLDSPQK D KNH T    RI+GRSSRRSRRISSLP+TS QDQ
Subjt:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH----RLRLDRLLPDTADSTLDSPQK-DRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQ

Query:  VVPQMEKRAVEDEDERDHPMSPIN
        VVPQ+EKRAVEDEDERDHPMSP+N
Subjt:  VVPQMEKRAVEDEDERDHPMSPIN

TrEMBL top hitse value%identityAlignment
A0A0A0L5V0 Uncharacterized protein6.6e-4782.79Show/hide
Query:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNR-HR--LRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQF++TGP WTNEKHMHFLNS+EASFVRSMF+NR HR  LRLDRLLPDTADSTLDSP    KNHPT G  RI+GRS+RRSRRISS PYTS QDQVV
Subjt:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNR-HR--LRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKRAVEDEDERDHPMSPIN
        PQMEKRAVEDEDERDHPMSP+N
Subjt:  PQMEKRAVEDEDERDHPMSPIN

A0A6J1CHV7 uncharacterized protein LOC1110116401.2e-4582.11Show/hide
Query:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKN----RHRLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQV
        M SHVQF+ETG  WTNEKHMHFLNSMEASFVRSMF+N    R RLRLDR LPDT+DSTLDSPQKDRKNH T G   IDGRSS RSR  SSLP+TS QDQV
Subjt:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKN----RHRLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQV

Query:  VPQMEKRAVEDEDERDHPMSPIN
        VPQMEKRAVEDEDERDHPMSPIN
Subjt:  VPQMEKRAVEDEDERDHPMSPIN

A0A6J1E5I2 uncharacterized protein LOC111430892 isoform X13.3e-4682.79Show/hide
Query:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQFSET PFWTNEKHMHFLNSMEASFVRSMFKNR+   RL+LDR L DTADSTLDSPQK+RK H    G R+DGRSSRRSRRI SLP+TSIQDQVV
Subjt:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKRAVEDEDERDHPMSPIN
        PQME+RAVEDEDERDHPMSP+N
Subjt:  PQMEKRAVEDEDERDHPMSPIN

A0A6J1G1G2 uncharacterized protein LOC1114498011.6e-4582.11Show/hide
Query:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKN-HPTPGGGRIDGRSSRRSRRISSLPYTSIQDQV
        MASHVQFS+TGPFWT+EKH+HFLNSMEASFVRSM++N H   RLRL+RLLPDTADSTLDS QK RKN HPT GGGR+DGRSSRRSRRISSLP  SIQDQV
Subjt:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKN-HPTPGGGRIDGRSSRRSRRISSLPYTSIQDQV

Query:  VPQMEKRAVEDEDERDHPMSPIN
        VPQME RA E+EDE DHP SPIN
Subjt:  VPQMEKRAVEDEDERDHPMSPIN

A0A6J1JBA6 uncharacterized protein LOC111482903 isoform X12.5e-4682.79Show/hide
Query:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQFSET PFWTNEKHMHFLNSMEASFVRSMFKNR+   RLRLDR L DTADSTLDSPQK+RK H    G R+DGRSSRRSRRI SLP+TSIQDQVV
Subjt:  MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRH---RLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKRAVEDEDERDHPMSPIN
        PQME+RAVEDEDERDHP+SP+N
Subjt:  PQMEKRAVEDEDERDHPMSPIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCACGTGCAATTCAGCGAAACGGGGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTCGTCCGATCAATGTTCAAAAA
TCGCCACCGTCTACGGCTGGACCGCCTCCTGCCGGACACCGCTGACTCAACCCTAGATTCGCCTCAGAAGGACAGAAAAAACCATCCTACCCCCGGAGGTGGCAGAATTG
ACGGTCGATCTAGCAGGAGATCGAGGAGGATTTCATCTCTACCGTACACTTCAATTCAAGATCAGGTGGTTCCACAGATGGAAAAGAGAGCAGTTGAGGATGAAGATGAG
AGAGACCATCCCATGTCACCTATCAACTGA
mRNA sequenceShow/hide mRNA sequence
CTCCCAAACCCCCACCGGAAAAAGCGTTTTTCTTAATTCTGCTTCTTCTTCTTCCAATTCATTCATCTCTGTTTCTTTCTATTTTTTCCTTATAAACCCTAGCCCATGGC
GTCGCACGTGCAATTCAGCGAAACGGGGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTCGTCCGATCAATGTTCAAAAATCGCC
ACCGTCTACGGCTGGACCGCCTCCTGCCGGACACCGCTGACTCAACCCTAGATTCGCCTCAGAAGGACAGAAAAAACCATCCTACCCCCGGAGGTGGCAGAATTGACGGT
CGATCTAGCAGGAGATCGAGGAGGATTTCATCTCTACCGTACACTTCAATTCAAGATCAGGTGGTTCCACAGATGGAAAAGAGAGCAGTTGAGGATGAAGATGAGAGAGA
CCATCCCATGTCACCTATCAACTGAGAAATATAATAATAATATTTTTTTTCTGCAATTTTTTTTTCTTCTTTTAATCTTTATGTTTTTTCACCTTAGTTTGTTAAATCTA
AATTAATGATGGTGTGAAAAAAGGGTTTAATTGGAAATTAGTGAATTTGATTGGGTGGAAGGATTAATTTTTG
Protein sequenceShow/hide protein sequence
MASHVQFSETGPFWTNEKHMHFLNSMEASFVRSMFKNRHRLRLDRLLPDTADSTLDSPQKDRKNHPTPGGGRIDGRSSRRSRRISSLPYTSIQDQVVPQMEKRAVEDEDE
RDHPMSPIN