; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004936 (gene) of Snake gourd v1 genome

Gene IDTan0004936
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein SPIRAL1-like 5
Genome locationLG01:11707278..11708138
RNA-Seq ExpressionTan0004936
SyntenyTan0004936
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146520.1 protein SPIRAL1-like 5 [Cucumis sativus]2.2e-4291Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNS-SPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DDQP KPQVSK++LPPPYGIDLNPDD NN+ SPSPKQ+VS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNS-SPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

XP_008452039.1 PREDICTED: protein SPIRAL1-like 5 [Cucumis melo]1.3e-4290.2Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDD--KNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQP KPQVSK++LPPPYGIDLNPDD   NN SPSPKQ+VS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDD--KNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

XP_022136791.1 protein SPIRAL1-like 5 [Momordica charantia]1.2e-4390Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDK-NNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
        MSRGGSYGGGRSSLGYLFGNDDQPTKPQVS++ILPPPYGID++PDD+ NN SPSPKQ+VSNNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGDK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDK-NNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK

XP_022941576.1 protein SPIRAL1-like 5 [Cucurbita moschata]8.1e-4589.9Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
        MSRGGSYGGGRSSLGYLFGNDD+P KPQVSK++LPPPYGID+NPDD+NN SPSPKQ  SNNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK

XP_038883008.1 protein SPIRAL1-like 5 [Benincasa hispida]2.4e-4491.09Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNS--SPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DDQP KPQVSK++LPPPYGIDLNPDD NN+  SPSPKQ+VSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNS--SPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A1S3BTQ0 protein SPIRAL1-like 56.3e-4390.2Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDD--KNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQP KPQVSK++LPPPYGIDLNPDD   NN SPSPKQ+VS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDD--KNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

A0A5D3CZ49 Protein SPIRAL1-like 56.3e-4390.2Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDD--KNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DDQP KPQVSK++LPPPYGIDLNPDD   NN SPSPKQ+VS NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDD--KNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

A0A6J1C4I1 protein SPIRAL1-like 55.7e-4490Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDK-NNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
        MSRGGSYGGGRSSLGYLFGNDDQPTKPQVS++ILPPPYGID++PDD+ NN SPSPKQ+VSNNYPRAHGQNSGNF+TDRPSTKVKSAPG DSSLGYLFGDK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDK-NNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK

A0A6J1FLH4 protein SPIRAL1-like 53.9e-4589.9Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
        MSRGGSYGGGRSSLGYLFGNDD+P KPQVSK++LPPPYGID+NPDD+NN SPSPKQ  SNNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK

A0A6J1J7K0 protein SPIRAL1-like 53.9e-4589.9Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK
        MSRGGSYGGGRSSLGYLFGNDD+P KPQVSK++LPPPYGID+NPDD+NN SPSPKQ  SNNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGDK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 12.6e-1747.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVV------------------SNNYPRAHGQNSGNFITDRPSTKV
        M RG S GGG+SSLGYLFG+ + P KP ++    P    + ++ D      PSPK V                   +NNY RA GQN+GNF+TDRPSTKV
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVV------------------SNNYPRAHGQNSGNFITDRPSTKV

Query:  KSAPGGDSSLGYLFG
         +APGG SSL YLFG
Subjt:  KSAPGGDSSLGYLFG

Q7Y1L9 Protein SPIRAL1-like 15.1e-1850.88Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQP---TKPQVSKLILPPPYGIDLNPDDKNNSSPSP------KQV--------VSNNYPRAHGQNSGNFITDRPSTKVK
        MSRGGS GGG+SSLGYLFG ++ P    KP  +    P P              PSP      KQ+         +NNY RA GQN+GNF+TDRPSTKV 
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQP---TKPQVSKLILPPPYGIDLNPDDKNNSSPSP------KQV--------VSNNYPRAHGQNSGNFITDRPSTKVK

Query:  SAPGGDSSLGYLFG
        +APGG SSLGYLFG
Subjt:  SAPGGDSSLGYLFG

Q8LGD1 Protein SPIRAL1-like 59.7e-2560.19Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQ----PTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF
        MSRGGS+GGG+SSLGYLFG+D++    P  P   K    PPYG+D   +D + +   PK + +NNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLF
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQ----PTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF

Query:  GDK
        GDK
Subjt:  GDK

Q9LE54 Protein SPIRAL1-like 25.7e-1752.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSK--------LILPPPYGIDLNPDDKNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS
        M RG S GGG+SSLGYLFG+ + P    V+K           PP      N  D     P+     S NNY RA GQN+GNFITDRPSTKV SAPGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSK--------LILPPPYGIDLNPDDKNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

Q9SJW3 Protein SPIRAL13.1e-1545.22Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILP--------PPY-----------GIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTK
        M RG S GGG+SSL YLFG D    KP  +    P        PP               + P + N   P+  +   NNY RA GQN+GNF+TDRPSTK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILP--------PPY-----------GIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTK

Query:  VKSAPGGDSSLGYLF
        V +APGG SSL YLF
Subjt:  VKSAPGGDSSLGYLF

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like11.8e-1847.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVV------------------SNNYPRAHGQNSGNFITDRPSTKV
        M RG S GGG+SSLGYLFG+ + P KP ++    P    + ++ D      PSPK V                   +NNY RA GQN+GNF+TDRPSTKV
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVV------------------SNNYPRAHGQNSGNFITDRPSTKV

Query:  KSAPGGDSSLGYLFG
         +APGG SSL YLFG
Subjt:  KSAPGGDSSLGYLFG

AT1G69230.1 SPIRAL1-like24.0e-1852.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSK--------LILPPPYGIDLNPDDKNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS
        M RG S GGG+SSLGYLFG+ + P    V+K           PP      N  D     P+     S NNY RA GQN+GNFITDRPSTKV SAPGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSK--------LILPPPYGIDLNPDDKNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

AT1G69230.2 SPIRAL1-like24.0e-1852.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSK--------LILPPPYGIDLNPDDKNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS
        M RG S GGG+SSLGYLFG+ + P    V+K           PP      N  D     P+     S NNY RA GQN+GNFITDRPSTKV SAPGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSK--------LILPPPYGIDLNPDDKNNSSPSPKQVVS-NNYPRAHGQNSGNFITDRPSTKVKSAPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

AT2G03680.1 spiral12.2e-1645.22Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILP--------PPY-----------GIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTK
        M RG S GGG+SSL YLFG D    KP  +    P        PP               + P + N   P+  +   NNY RA GQN+GNF+TDRPSTK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILP--------PPY-----------GIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTK

Query:  VKSAPGGDSSLGYLF
        V +APGG SSL YLF
Subjt:  VKSAPGGDSSLGYLF

AT4G23496.1 SPIRAL1-like56.9e-2660.19Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDQ----PTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF
        MSRGGS+GGG+SSLGYLFG+D++    P  P   K    PPYG+D   +D + +   PK + +NNY R  GQNSGNF+TDRP+TKVKS PGG SSLGYLF
Subjt:  MSRGGSYGGGRSSLGYLFGNDDQ----PTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLF

Query:  GDK
        GDK
Subjt:  GDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGAGGTGGAAGCTATGGCGGTGGAAGAAGCTCCTTGGGCTATCTTTTTGGTAACGATGATCAACCCACAAAGCCTCAAGTCTCTAAACTCATTCTTCCTCCTCC
TTATGGAATTGATCTCAACCCTGATGACAAAAACAACTCTTCTCCCTCTCCAAAACAAGTTGTCTCCAACAATTATCCCCGAGCTCACGGCCAAAACTCGGGGAACTTCA
TCACGGATCGTCCATCAACCAAGGTGAAATCGGCTCCTGGTGGTGATTCATCGCTAGGGTATCTGTTTGGAGATAAGTGA
mRNA sequenceShow/hide mRNA sequence
GGATCATCATATATATATATAATCAACCAACATTAGGGTTTCAACTTTCTTTTGTGTTTTTGTCTTCCAATTTTTTGCTCTAGATCCAAAGCTGAAGATATCAGATCGAC
CCACAAGACAATATCATGAGTAGAGGTGGAAGCTATGGCGGTGGAAGAAGCTCCTTGGGCTATCTTTTTGGTAACGATGATCAACCCACAAAGCCTCAAGTCTCTAAACT
CATTCTTCCTCCTCCTTATGGAATTGATCTCAACCCTGATGACAAAAACAACTCTTCTCCCTCTCCAAAACAAGTTGTCTCCAACAATTATCCCCGAGCTCACGGCCAAA
ACTCGGGGAACTTCATCACGGATCGTCCATCAACCAAGGTGAAATCGGCTCCTGGTGGTGATTCATCGCTAGGGTATCTGTTTGGAGATAAGTGATAATTGTGAAAGTTT
GTGTCTTCATATAGCTGACTATATTGGAAGAGAATTCTAAAGGGTATGCTTTAGTGTGTGGCTTTTCTAAATAAATGTGTGCAATTATTATGTATATGAAGGAACATATA
GCCTGAATTTGTGTAGCCTATATGTGTATAGTTTAATGTACCGATCTATATATATTTTAAAACAATGACGATTTGTAGTTTGATTATGTCTGTGATTAAATATAAGGACC
TTATACATGAAA
Protein sequenceShow/hide protein sequence
MSRGGSYGGGRSSLGYLFGNDDQPTKPQVSKLILPPPYGIDLNPDDKNNSSPSPKQVVSNNYPRAHGQNSGNFITDRPSTKVKSAPGGDSSLGYLFGDK