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Tan0004937 (gene) of Snake gourd v1 genome

Gene IDTan0004937
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG10:16564048..16564272
RNA-Seq ExpressionTan0004937
SyntenyTan0004937
Gene Ontology termsGO:0006952 - defense response (biological process)
InterPro domainsIPR040273 - PAMP-induced secreted peptide 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043548.1 hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa]5.0e-1562.82Show/hide
Query:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH
        MKFQK IA LL++CV+FG+V   +  VDAAR+LSET   +HDVD  DSYSI + KAK++V CWL  L SGPSP GPGH
Subjt:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH

KAA0043550.1 hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa]1.2e-1158.75Show/hide
Query:  MKFQKIIATLLMVCVMFGVVLRQMNV--VDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH
        MKFQK IA LL+VCV+FG+V   +++  VDAAR+L ET   +HDVD  D YSI + KAK++V CWL  L SGPS  GPGH
Subjt:  MKFQKIIATLLMVCVMFGVVLRQMNV--VDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH

KAG7018440.1 hypothetical protein SDJN02_20308, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-2175Show/hide
Query:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSETSNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH
        MKFQK I +  +VCV+FG++L Q++ +DAAR+LSETSNH VD  D YSIVYQKAKETVSCWLGKLSSGPSPSGPGH
Subjt:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSETSNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH

KGN53025.1 hypothetical protein Csa_015299 [Cucumis sativus]1.3e-1871.95Show/hide
Query:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAAR-LLSETSNHDVD-------DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH
        MKFQK I TLL+VCV+ GVVL Q+NV DAAR LLSET   D D       D YSIVYQKAKE++SCWLGKLSSGPSPSGPGH
Subjt:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAAR-LLSETSNHDVD-------DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH

TYK02483.1 hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa]1.1e-1461.54Show/hide
Query:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH
        MKFQK IA LL++C++FG+V   +  VDAAR+LSET   +HDVD  DSYSI + KAK++V CWL  L SGPSP GPGH
Subjt:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH

TrEMBL top hitse value%identityAlignment
A0A0A0KTV4 Uncharacterized protein6.2e-1971.95Show/hide
Query:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAAR-LLSETSNHDVD-------DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH
        MKFQK I TLL+VCV+ GVVL Q+NV DAAR LLSET   D D       D YSIVYQKAKE++SCWLGKLSSGPSPSGPGH
Subjt:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAAR-LLSETSNHDVD-------DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH

A0A1R3J1F9 Uncharacterized protein3.4e-0946.75Show/hide
Query:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSE---TSNHDVDDSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH
        M  +K+I+++LM+ V+   +L Q+ V++A R+L E     NH   ++Y+ VY+KAK T+SCWL +L+SGPSP GPGH
Subjt:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSE---TSNHDVDDSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH

A0A5A7TJV8 Uncharacterized protein5.6e-1258.75Show/hide
Query:  MKFQKIIATLLMVCVMFGVVLRQMNV--VDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH
        MKFQK IA LL+VCV+FG+V   +++  VDAAR+L ET   +HDVD  D YSI + KAK++V CWL  L SGPS  GPGH
Subjt:  MKFQKIIATLLMVCVMFGVVLRQMNV--VDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH

A0A5A7TL44 Uncharacterized protein2.4e-1562.82Show/hide
Query:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH
        MKFQK IA LL++CV+FG+V   +  VDAAR+LSET   +HDVD  DSYSI + KAK++V CWL  L SGPSP GPGH
Subjt:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH

A0A5D3BS33 Uncharacterized protein5.4e-1561.54Show/hide
Query:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH
        MKFQK IA LL++C++FG+V   +  VDAAR+LSET   +HDVD  DSYSI + KAK++V CWL  L SGPSP GPGH
Subjt:  MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSET--SNHDVD--DSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCCAAAAGATTATTGCTACCCTTTTGATGGTTTGTGTAATGTTTGGTGTTGTTTTGAGGCAGATGAATGTGGTTGATGCAGCACGATTGCTCTCAGAGACTTC
AAATCATGATGTTGATGATTCATATTCCATAGTTTATCAAAAAGCAAAGGAGACTGTCTCGTGTTGGCTTGGAAAGTTATCTTCTGGACCCAGTCCTAGTGGCCCAGGTC
ACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTCCAAAAGATTATTGCTACCCTTTTGATGGTTTGTGTAATGTTTGGTGTTGTTTTGAGGCAGATGAATGTGGTTGATGCAGCACGATTGCTCTCAGAGACTTC
AAATCATGATGTTGATGATTCATATTCCATAGTTTATCAAAAAGCAAAGGAGACTGTCTCGTGTTGGCTTGGAAAGTTATCTTCTGGACCCAGTCCTAGTGGCCCAGGTC
ACTAG
Protein sequenceShow/hide protein sequence
MKFQKIIATLLMVCVMFGVVLRQMNVVDAARLLSETSNHDVDDSYSIVYQKAKETVSCWLGKLSSGPSPSGPGH