| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 4.0e-143 | 58.56 | Show/hide |
Query: ETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCFI
ETQ K+ KVS NA+LWHLRL HINLNRIERLVKS ILN+LE+NSLP CESCLEGKMTKRSF+GKG RAK P EL+HSDLCG M+VKARGGYEYF+ FI
Subjt: ETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCFI
Query: DDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLPD
DD+SRYG++YL+H KSES +KFKEYK EVEN +GKTIKTL+SDRGGEYMD++FQDY+I+ GI P++ NGVSERRNRTLLDMVRSM SYA+LPD
Subjt: DDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLPD
Query: SFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK--------------------------
SF GYA+ETA+ ILNNVPSKSV ETP+ELW GRK GYPKE++
Subjt: SFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK--------------------------
Query: --------------YVNKCVDPSTSSQV-----------RSQELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEWIKGMDQE
+ N PS+S++V SQELR+PRRSGRVV Q RY+ L ETQ+I PDD EDPLTY QAM D D+D+WIK M+ E
Subjt: --------------YVNKCVDPSTSSQV-----------RSQELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEWIKGMDQE
Query: MESMHFNSAESLW-----INQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
MESM+FNS +L + GCKWIYKRKR GKV TFKARLV K +TQ EGVDYEETFSPVAM+KSIRILL+I +Y+YE+
Subjt: MESMHFNSAESLW-----INQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-143 | 58.81 | Show/hide |
Query: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
A TQ KR ++SP N +LWHLRL HINL+RI RLVK+ +LN+L++ SLP CESCLEGKMTKR F+GKGYRAKEP ELIHSDLCG M+VKARGG+EYF+ F
Subjt: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
Query: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
IDDYSRYGY+YLM KSE+L+KFKEYKTEVENLL K IK L+SDRGGEYMD FQDYMI+HGI P + NGVSERRNRTLLDMVRSM SYA+LP
Subjt: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
Query: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
SF GYAVETAV ILNNVPSKSV ETPFELW GRK GYPKET+
Subjt: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
Query: ----------YVNKCVDPST--------SSQV----------RSQELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEWIKGM
+++ D ST SS+V SQ LRMPRRSGRVV Q RY+ L ETQV+ PDD EDPL+Y QAM D DKD+W+K M
Subjt: ----------YVNKCVDPST--------SSQV----------RSQELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEWIKGM
Query: DQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
D EMESM+FNS L + GCKWIYKRKR GKV TFKARLV K +TQ EGVDYEETFSPVAM+KSIRILL+I +YDYE+
Subjt: DQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 4.8e-141 | 57.32 | Show/hide |
Query: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
A TQ KR+K+SPKENAHLWHLRL HINLNRIERLVK+ +L+ELEENSLP+CESCLEGKMTKR F+GKG+RAKEP EL+HSDLCG M+VKARGG+EYF+ F
Subjt: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
Query: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
DDYSRYGY+YLM KSE+L+KFKEYK EVEN L KTIKT +SDRGGEYMD +FQ+Y+++ GI P + NGVSERRNRTLLDMVRSM SYA LP
Subjt: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
Query: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
+SF GYAV+TAV ILN VPSKSV ETP +LWNGRK GYPK T+
Subjt: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
Query: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
+ +PST S R+ Q LR PRRSGRV RYMSL ET + D D EDPLT+ +AM D DKDEW
Subjt: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
Query: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
IK M+ E+ESM+FNS L + GCKWIYKRKRG DGKV TFKARLV K +TQVEGVDYEETFSPVAM+KSIRILL+I AY+DYE+
Subjt: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 4.8e-141 | 57.32 | Show/hide |
Query: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
A TQ KR+K+SPKENAHLWHLRL HINLNRIERLVK+ +L+ELEENSLP+CESCLEGKMTKR F+GKG+RAKEP EL+HSDLCG M+VKARGG+EYF+ F
Subjt: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
Query: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
DDYSRYGY+YLM KSE+L+KFKEYK EVEN L KTIKT +SDRGGEYMD +FQ+Y+++ GI P + NGVSERRNRTLLDMVRSM SYA LP
Subjt: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
Query: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
+SF GYAV+TAV ILN VPSKSV ETP +LWNGRK GYPK T+
Subjt: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
Query: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
+ +PST S R+ Q LR PRRSGRV RYMSL ET + D D EDPLT+ +AM D DKDEW
Subjt: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
Query: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
IK M+ E+ESM+FNS L + GCKWIYKRKRG DGKV TFKARLV K +TQVEGVDYEETFSPVAM+KSIRILL+I AY+DYE+
Subjt: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 4.8e-141 | 57.32 | Show/hide |
Query: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
A TQ KR+K+SPKENAHLWHLRL HINLNRIERLVK+ +L+ELEENSLP+CESCLEGKMTKR F+GKG+RAKEP EL+HSDLCG M+VKARGG+EYF+ F
Subjt: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
Query: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
DDYSRYGY+YLM KSE+L+KFKEYK EVEN L KTIKT +SDRGGEYMD +FQ+Y+++ GI P + NGVSERRNRTLLDMVRSM SYA LP
Subjt: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
Query: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
+SF GYAV+TAV ILN VPSKSV ETP +LWNGRK GYPK T+
Subjt: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
Query: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
+ +PST S R+ Q LR PRRSGRV RYMSL ET + D D EDPLT+ +AM D DKDEW
Subjt: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
Query: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
IK M+ E+ESM+FNS L + GCKWIYKRKRG DGKV TFKARLV K +TQVEGVDYEETFSPVAM+KSIRILL+I AY+DYE+
Subjt: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 2.3e-141 | 57.32 | Show/hide |
Query: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
A TQ KR+K+SPKENAHLWHLRL HINLNRIERLVK+ +L+ELEENSLP+CESCLEGKMTKR F+GKG+RAKEP EL+HSDLCG M+VKARGG+EYF+ F
Subjt: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
Query: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
DDYSRYGY+YLM KSE+L+KFKEYK EVEN L KTIKT +SDRGGEYMD +FQ+Y+++ GI P + NGVSERRNRTLLDMVRSM SYA LP
Subjt: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
Query: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
+SF GYAV+TAV ILN VPSKSV ETP +LWNGRK GYPK T+
Subjt: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
Query: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
+ +PST S R+ Q LR PRRSGRV RYMSL ET + D D EDPLT+ +AM D DKDEW
Subjt: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
Query: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
IK M+ E+ESM+FNS L + GCKWIYKRKRG DGKV TFKARLV K +TQVEGVDYEETFSPVAM+KSIRILL+I AY+DYE+
Subjt: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
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| A0A5A7TZD0 Gag/pol protein | 1.1e-143 | 58.81 | Show/hide |
Query: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
A TQ KR ++SP N +LWHLRL HINL+RI RLVK+ +LN+L++ SLP CESCLEGKMTKR F+GKGYRAKEP ELIHSDLCG M+VKARGG+EYF+ F
Subjt: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
Query: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
IDDYSRYGY+YLM KSE+L+KFKEYKTEVENLL K IK L+SDRGGEYMD FQDYMI+HGI P + NGVSERRNRTLLDMVRSM SYA+LP
Subjt: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
Query: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
SF GYAVETAV ILNNVPSKSV ETPFELW GRK GYPKET+
Subjt: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
Query: ----------YVNKCVDPST--------SSQV----------RSQELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEWIKGM
+++ D ST SS+V SQ LRMPRRSGRVV Q RY+ L ETQV+ PDD EDPL+Y QAM D DKD+W+K M
Subjt: ----------YVNKCVDPST--------SSQV----------RSQELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEWIKGM
Query: DQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
D EMESM+FNS L + GCKWIYKRKR GKV TFKARLV K +TQ EGVDYEETFSPVAM+KSIRILL+I +YDYE+
Subjt: DQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
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| A0A5A7V4M1 Gag/pol protein | 2.3e-141 | 57.32 | Show/hide |
Query: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
A TQ KR+K+SPKENAHLWHLRL HINLNRIERLVK+ +L+ELEENSLP+CESCLEGKMTKR F+GKG+RAKEP EL+HSDLCG M+VKARGG+EYF+ F
Subjt: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
Query: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
DDYSRYGY+YLM KSE+L+KFKEYK EVEN L KTIKT +SDRGGEYMD +FQ+Y+++ GI P + NGVSERRNRTLLDMVRSM SYA LP
Subjt: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
Query: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
+SF GYAV+TAV ILN VPSKSV ETP +LWNGRK GYPK T+
Subjt: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
Query: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
+ +PST S R+ Q LR PRRSGRV RYMSL ET + D D EDPLT+ +AM D DKDEW
Subjt: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
Query: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
IK M+ E+ESM+FNS L + GCKWIYKRKRG DGKV TFKARLV K +TQVEGVDYEETFSPVAM+KSIRILL+I AY+DYE+
Subjt: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
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| A0A5D3CPJ6 Gag/pol protein | 2.3e-141 | 57.32 | Show/hide |
Query: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
A TQ KR+K+SPKENAHLWHLRL HINLNRIERLVK+ +L+ELEENSLP+CESCLEGKMTKR F+GKG+RAKEP EL+HSDLCG M+VKARGG+EYF+ F
Subjt: AETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCF
Query: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
DDYSRYGY+YLM KSE+L+KFKEYK EVEN L KTIKT +SDRGGEYMD +FQ+Y+++ GI P + NGVSERRNRTLLDMVRSM SYA LP
Subjt: IDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLP
Query: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
+SF GYAV+TAV ILN VPSKSV ETP +LWNGRK GYPK T+
Subjt: DSFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK-------------------------
Query: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
+ +PST S R+ Q LR PRRSGRV RYMSL ET + D D EDPLT+ +AM D DKDEW
Subjt: --------------YVNKCVDPST---------------SSQVRS---QELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEW
Query: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
IK M+ E+ESM+FNS L + GCKWIYKRKRG DGKV TFKARLV K +TQVEGVDYEETFSPVAM+KSIRILL+I AY+DYE+
Subjt: IKGMDQEMESMHFNSAESL-----WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
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| E2GK51 Gag/pol protein (Fragment) | 1.9e-143 | 58.56 | Show/hide |
Query: ETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCFI
ETQ K+ KVS NA+LWHLRL HINLNRIERLVKS ILN+LE+NSLP CESCLEGKMTKRSF+GKG RAK P EL+HSDLCG M+VKARGGYEYF+ FI
Subjt: ETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCFI
Query: DDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLPD
DD+SRYG++YL+H KSES +KFKEYK EVEN +GKTIKTL+SDRGGEYMD++FQDY+I+ GI P++ NGVSERRNRTLLDMVRSM SYA+LPD
Subjt: DDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLPD
Query: SFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK--------------------------
SF GYA+ETA+ ILNNVPSKSV ETP+ELW GRK GYPKE++
Subjt: SFLGYAVETAVCILNNVPSKSVCETPFELWNGRK---------------------------------GYPKETK--------------------------
Query: --------------YVNKCVDPSTSSQV-----------RSQELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEWIKGMDQE
+ N PS+S++V SQELR+PRRSGRVV Q RY+ L ETQ+I PDD EDPLTY QAM D D+D+WIK M+ E
Subjt: --------------YVNKCVDPSTSSQV-----------RSQELRMPRRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMVDADKDEWIKGMDQE
Query: MESMHFNSAESLW-----INQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
MESM+FNS +L + GCKWIYKRKR GKV TFKARLV K +TQ EGVDYEETFSPVAM+KSIRILL+I +Y+YE+
Subjt: MESMHFNSAESLW-----INQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.5e-32 | 33.2 | Show/hide |
Query: QTKRVKVSPKENAHLWHLRLDHIN------LNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRA--KEPFELIHSDLCGLMSVKARGGYE
Q + K N LWH R HI+ + R +LN L E S ICE CL GK + F + K P ++HSD+CG ++
Subjt: QTKRVKVSPKENAHLWHLRLDHIN------LNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRA--KEPFELIHSDLCGLMSVKARGGYE
Query: YFVCFIDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGIT-----PNSQHLNGVSERRNRTLLDMVRSMKS
YFV F+D ++ Y YL+ KS+ F+++ + E + L D G EY+ E + + +K GI+ P++ LNGVSER RT+ + R+M S
Subjt: YFVCFIDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGIT-----PNSQHLNGVSERRNRTLLDMVRSMKS
Query: YARLPDSFLGYAVETAVCILNNVPSKSVCE---TPFELWNGRKGYPKETK
A+L SF G AV TA ++N +PS+++ + TP+E+W+ +K Y K +
Subjt: YARLPDSFLGYAVETAVCILNNVPSKSVCE---TPFELWNGRKGYPKETK
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| P04146 Copia protein | 3.5e-09 | 31.48 | Show/hide |
Query: PLTYDQAMVDADKDEWIKGMDQEMESMHFNSAESLW-----INQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAI
P ++D+ DK W + ++ E+ + N+ ++ N +W++ K G +KARLV + FTQ +DYEETF+PVA + S R +L++
Subjt: PLTYDQAMVDADKDEWIKGMDQEMESMHFNSAESLW-----INQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAI
Query: VAYYDYEV
V Y+ +V
Subjt: VAYYDYEV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.8e-48 | 29.26 | Show/hide |
Query: LWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCFIDDYSRYGYIYLMHRKS
LWH R+ H++ ++ L K +++ + ++ C+ CL GK + SF R +L++SD+CG M +++ GG +YFV FIDD SR ++Y++ K
Subjt: LWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEYFVCFIDDYSRYGYIYLMHRKS
Query: ESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLPDSFLGYAVETAVCILNN
+ + F+++ VE G+ +K L+SD GGEY EF++Y HGI P + NGV+ER NRT+++ VRSM A+LP SF G AV+TA ++N
Subjt: ESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGI-----TPNSQHLNGVSERRNRTLLDMVRSMKSYARLPDSFLGYAVETAVCILNN
Query: VPSKSVC-ETPFELWNGRK---------------GYPKE--TKYVNKCVD--------------------------------------------------
PS + E P +W ++ PKE TK +K +
Subjt: VPSKSVC-ETPFELWNGRK---------------GYPKE--TKYVNKCVD--------------------------------------------------
Query: -------PSTSSQVRS-----------------------------QELRMP----------RRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMV
PSTS+ S +E+ P RRS R + RY S T+ + DD E P + + +
Subjt: -------PSTSSQVRS-----------------------------QELRMP----------RRSGRVVRQLERYMSLDETQVITPDDDYEDPLTYDQAMV
Query: DADKDEWIKGMDQEMESMHFNSAESLWINQTG-----CKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
+K++ +K M +EMES+ N L G CKW++K K+ D K+ +KARLV K F Q +G+D++E FSPV + SIR +L++ A D EV
Subjt: DADKDEWIKGMDQEMESMHFNSAESLWINQTG-----CKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAIVAYYDYEV
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| P93293 Uncharacterized mitochondrial protein AtMg00300 | 4.6e-09 | 36.78 | Show/hide |
Query: ETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSV
ET + + K+ LWH RL H++ +E LVK L+ + +SL CE C+ GK + +FS + K P + +HSDL G SV
Subjt: ETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.6e-22 | 29.06 | Show/hide |
Query: MAETQTKRVKVSPKENA--HLWHLRLDHINLNRIERLVKSVILNELE-ENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEY
+A +Q + SP A WH RL H + + ++ + L+ L + C CL K K FS + P E I+SD+ + + Y Y
Subjt: MAETQTKRVKVSPKENA--HLWHLRLDHINLNRIERLVKSVILNELE-ENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEY
Query: FVCFIDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGIT-----PNSQHLNGVSERRNRTLLDMVRSMKSY
+V F+D ++RY ++Y + +KS+ + F +K +EN I T SD GGE++ +Y +HGI+ P++ NG+SER++R +++ ++ S+
Subjt: FVCFIDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGIT-----PNSQHLNGVSERRNRTLLDMVRSMKSY
Query: ARLPDSFLGYAVETAVCILNNVPSKSV-CETPFE
A +P ++ YA AV ++N +P+ + E+PF+
Subjt: ARLPDSFLGYAVETAVCILNNVPSKSV-CETPFE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.2e-10 | 37.25 | Show/hide |
Query: DPLTYDQAMVDADKDEWIKGMDQEMESMHFNSAESL------WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILL
+P T QA+ D + W M E+ + N L + GC+WI+ +K DG ++ +KARLV K + Q G+DY ETFSPV SIRI+L
Subjt: DPLTYDQAMVDADKDEWIKGMDQEMESMHFNSAESL------WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILL
Query: AI
+
Subjt: AI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.0e-24 | 30.77 | Show/hide |
Query: MAETQTKRVKVSP--KENAHLWHLRLDHINLNRIERLVKSVILNELE-ENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEY
+A +Q + SP K WH RL H +L + ++ + L L + L C C K K FS + +P E I+SD+ + + Y Y
Subjt: MAETQTKRVKVSP--KENAHLWHLRLDHINLNRIERLVKSVILNELE-ENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSVKARGGYEY
Query: FVCFIDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGIT-----PNSQHLNGVSERRNRTLLDMVRSMKSY
+V F+D ++RY ++Y + +KS+ F +K+ VEN I TL SD GGE++ +DY+ +HGI+ P++ NG+SER++R +++M ++ S+
Subjt: FVCFIDDYSRYGYIYLMHRKSESLKKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIKHGIT-----PNSQHLNGVSERRNRTLLDMVRSMKSY
Query: ARLPDSFLGYAVETAVCILNNVPSKSV-CETPFE
A +P ++ YA AV ++N +P+ + ++PF+
Subjt: ARLPDSFLGYAVETAVCILNNVPSKSV-CETPFE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.9e-10 | 39.22 | Show/hide |
Query: DPLTYDQAMVDADKDEWIKGMDQEMESMHFNSAESL------WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILL
+P T QAM D D W + M E+ + N L + GC+WI+ +K DG ++ +KARLV K + Q G+DY ETFSPV SIRI+L
Subjt: DPLTYDQAMVDADKDEWIKGMDQEMESMHFNSAESL------WINQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILL
Query: AI
+
Subjt: AI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.3e-14 | 41.67 | Show/hide |
Query: EDPLTYDQAMVDADKDEWIKGMDQE---MESMHFNSAESLWINQ--TGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILL
++P TY++A + W MD E ME+ H +L N+ GCKW+YK K DG + +KARLV K +TQ EG+D+ ETFSPV + S++++L
Subjt: EDPLTYDQAMVDADKDEWIKGMDQE---MESMHFNSAESLWINQ--TGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILL
Query: AIVAYYDY
AI A Y++
Subjt: AIVAYYDY
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 3.2e-10 | 36.78 | Show/hide |
Query: ETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSV
ET + + K+ LWH RL H++ +E LVK L+ + +SL CE C+ GK + +FS + K P + +HSDL G SV
Subjt: ETQTKRVKVSPKENAHLWHLRLDHINLNRIERLVKSVILNELEENSLPICESCLEGKMTKRSFSGKGYRAKEPFELIHSDLCGLMSV
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 5.5e-10 | 36.36 | Show/hide |
Query: QAMVDADKDE-WIKGMDQEMESMHFNSAESLWI--------NQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAI
++++ A KD W + M +E++++ S WI N GCKW++K K DG + KARLV K F Q EG+ + ET+SPV +IR +L +
Subjt: QAMVDADKDE-WIKGMDQEMESMHFNSAESLWI--------NQTGCKWIYKRKRGVDGKVHTFKARLVTKDFTQVEGVDYEETFSPVAMVKSIRILLAI
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