; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005037 (gene) of Snake gourd v1 genome

Gene IDTan0005037
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranscription initiation factor TFIID subunit 10
Genome locationLG02:96186501..96189852
RNA-Seq ExpressionTan0005037
SyntenyTan0005037
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0006413 - translational initiation (biological process)
GO:0016573 - histone acetylation (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
GO:1990841 - promoter-specific chromatin binding (molecular function)
InterPro domainsIPR003923 - Transcription initiation factor TFIID, 23-30kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598532.1 Transcription initiation factor TFIID subunit 10, partial [Cucurbita argyrosperma subsp. sororia]2.8e-6497.08Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNHS QQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TMDDLSKALREYG NVKHQEYFADSPSTGVD TSREE
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

XP_004138687.1 transcription initiation factor TFIID subunit 10 [Cucumis sativus]6.3e-6496.35Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNH+ QQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TMDDLSKALREYG NVKHQEYFADSPSTGVD TSREE
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

XP_008445293.1 PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis melo]8.3e-6496.35Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNHS QQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TM+DLSKALREYG NVKHQEYFADSPSTGVD TSREE
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

XP_022132183.1 transcription initiation factor TFIID subunit 10 [Momordica charantia]3.7e-6494.89Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNHS QQ TE RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLIL
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TM+DLSKALREYG NVKHQEYFADSPSTGVDPTSREE
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

XP_022962589.1 transcription initiation factor TFIID subunit 10 [Cucurbita moschata]2.8e-6497.08Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNHS QQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TMDDLSKALREYG NVKHQEYFADSPSTGVD TSREE
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

TrEMBL top hitse value%identityAlignment
A0A0A0LPV6 Transcription initiation factor TFIID subunit 103.1e-6496.35Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNH+ QQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TMDDLSKALREYG NVKHQEYFADSPSTGVD TSREE
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

A0A1S3BD75 Transcription initiation factor TFIID subunit 104.0e-6496.35Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNHS QQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TM+DLSKALREYG NVKHQEYFADSPSTGVD TSREE
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

A0A6J1BVJ5 Transcription initiation factor TFIID subunit 101.8e-6494.89Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNHS QQ TE RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLIL
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TM+DLSKALREYG NVKHQEYFADSPSTGVDPTSREE
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

A0A6J1HHI7 Transcription initiation factor TFIID subunit 101.4e-6497.08Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNHS QQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TMDDLSKALREYG NVKHQEYFADSPSTGVD TSREE
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

A0A6J1KB50 Transcription initiation factor TFIID subunit 101.4e-6497.08Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNHS QQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TMDDLSKALREYG NVKHQEYFADSPSTGVD TSREE
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

SwissProt top hitse value%identityAlignment
O04173 Transcription initiation factor TFIID subunit 102.0e-5783.21Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNH QQ   E++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+L
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TM+DLSKALREYG NVKH EYFADSPSTG+DP +R+E
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

Q12962 Transcription initiation factor TFIID subunit 102.1e-2249.04Show/hide
Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGANVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK +  A    +   + KD++  LTM+DL+ AL EYG NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGANVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q8K0H5 Transcription initiation factor TFIID subunit 102.1e-2249.04Show/hide
Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGANVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK +  A    +   + KD++  LTM+DL+ AL EYG NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGANVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q9U5W9 Transcription initiation factor TFIID subunit 102.1e-1738.6Show/hide
Query:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAV------VKDKRDKQQKDKRLILTMDDLSKA
        +++ + E +  L +Y+PTIPD L  H L  +GF   D +++RLV+V+ QKF++D+A+DALQHCK R   +         K  K  KD++  L M+DL  A
Subjt:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAV------VKDKRDKQQKDKRLILTMDDLSKA

Query:  LREYGANVKHQEYF
        L ++G  ++  +YF
Subjt:  LREYGANVKHQEYF

Q9XZT7 Transcription initiation factor TFIID subunit 10b4.9e-1941.53Show/hide
Query:  QQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKDKRLILTMD
        + + T S H     LS+F++ L +YTP IPD +  HYL   GFQ  D R++RL+++A QK+++D+  DALQH KAR            + KD++  LTM+
Subjt:  QQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKDKRLILTMD

Query:  DLSKALREYGANVKHQEY
        DL  AL +YG NV+  +Y
Subjt:  DLSKALREYGANVKHQEY

Arabidopsis top hitse value%identityAlignment
AT4G31720.1 TBP-associated factor II 151.5e-5883.21Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNH QQ   E++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+L
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TM+DLSKALREYG NVKH EYFADSPSTG+DP +R+E
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE

AT4G31720.2 TBP-associated factor II 151.5e-5883.21Show/hide
Query:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL
        MNH QQ   E++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+L
Subjt:  MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLIL

Query:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE
        TM+DLSKALREYG NVKH EYFADSPSTG+DP +R+E
Subjt:  TMDDLSKALREYGANVKHQEYFADSPSTGVDPTSREE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCATAGCCAACAACAAGCGACAGAGAGCAGGCACGACGATGACGCAGCCCTCTCCGAGTTTCTAGCATCTCTAATGGAGTATACTCCTACTATTCCCGACGAGTT
GGTGGAGCATTACTTAGGGAAGAGTGGATTTCAGTGTCCTGACGTTCGATTGATCAGGCTTGTAGCTGTTGCCACACAGAAGTTTGTTGCAGATGTCGCCAGTGACGCTC
TCCAGCATTGCAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGCCTAATATTGACCATGGATGATCTCTCAAAGGCACTTCGT
GAGTATGGCGCCAATGTGAAACATCAAGAGTATTTTGCTGATAGCCCATCAACTGGAGTGGATCCTACTTCCAGAGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
GAGTAATTCAAACGAGCTTCATTTCGAAGAGGGAAAACGAAGAAGATGAACCATAGCCAACAACAAGCGACAGAGAGCAGGCACGACGATGACGCAGCCCTCTCCGAGTT
TCTAGCATCTCTAATGGAGTATACTCCTACTATTCCCGACGAGTTGGTGGAGCATTACTTAGGGAAGAGTGGATTTCAGTGTCCTGACGTTCGATTGATCAGGCTTGTAG
CTGTTGCCACACAGAAGTTTGTTGCAGATGTCGCCAGTGACGCTCTCCAGCATTGCAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAGGAT
AAGCGCCTAATATTGACCATGGATGATCTCTCAAAGGCACTTCGTGAGTATGGCGCCAATGTGAAACATCAAGAGTATTTTGCTGATAGCCCATCAACTGGAGTGGATCC
TACTTCCAGAGAGGAATGAGTTGTGCCAACGGTTATGTAAAGATGTTGAAACCAGAGTTGGGATCAGAATACATTCCCCTTGGATTGCAACTTCAAATTAATTGTTCCAG
AAAATTATCAAGAATCATGGACTTTTTATTTGTTCCAGAAAATGATGATGGATCATAGCCTTAAACTTAACCAC
Protein sequenceShow/hide protein sequence
MNHSQQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALR
EYGANVKHQEYFADSPSTGVDPTSREE