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Tan0005046 (gene) of Snake gourd v1 genome

Gene IDTan0005046
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG07:9333250..9338273
RNA-Seq ExpressionTan0005046
SyntenyTan0005046
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040112.1 hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa]1.8e-2686.67Show/hide
Query:  SSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS
        ++LIVLSVAHLSAD  Q  ARFPD LTSHQLLYLLF FPLQQLSRLALSLWTF CVPPPGSFYYYYYSSDSD SS
Subjt:  SSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS

PON98040.1 hypothetical protein TorRG33x02_061140 [Trema orientale]3.7e-2476.92Show/hide
Query:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS
        MVF+SL+VLSVAH+SADAWQC A FP+RL+SHQLL L+F FPLQQL RLAL LWTFLC+PPP SFY Y YSSDSD  S
Subjt:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS

XP_022153861.1 uncharacterized protein LOC111021275 [Momordica charantia]6.9e-3192.31Show/hide
Query:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS
        MVFSSLIVLSVAHLSADA QC A FPDRLTSHQLLYLLFGFPLQQLSRLALS WTF CVPPPGSFYYYYYSSDSD+SS
Subjt:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS

XP_022958637.1 uncharacterized protein LOC111459803 [Cucurbita moschata]4.5e-3088.61Show/hide
Query:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSSE
        MVF+SLIVLSVAHLSADA QC AR PDRLTSHQLLY+LF +PLQQLSRLALS+WTFLCVPPPGSFYYYYYSSD DSSSE
Subjt:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSSE

XP_030478483.1 uncharacterized protein LOC115695566 [Cannabis sativa]4.5e-2273.68Show/hide
Query:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDS
        MVF+SL+V+SVAH+SADAWQC A FP+RL+S QLL L+F FPLQQL R AL LWTFLC+PPP SFY Y YSSD DS
Subjt:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDS

TrEMBL top hitse value%identityAlignment
A0A0A0L0B8 Uncharacterized protein5.6e-2688.89Show/hide
Query:  IVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS
        IVLSVAHLSADA Q  ARFPD LTSHQLLYLLF FPLQQLSRLALSLWT  CVPPPGSFYYYYYSSDSD SS
Subjt:  IVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS

A0A2P5FJR7 Uncharacterized protein1.8e-2476.92Show/hide
Query:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS
        MVF+SL+VLSVAH+SADAWQC A FP+RL+SHQLL L+F FPLQQL RLAL LWTFLC+PPP SFY Y YSSDSD  S
Subjt:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS

A0A5A7T9K4 Uncharacterized protein8.6e-2786.67Show/hide
Query:  SSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS
        ++LIVLSVAHLSAD  Q  ARFPD LTSHQLLYLLF FPLQQLSRLALSLWTF CVPPPGSFYYYYYSSDSD SS
Subjt:  SSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS

A0A6J1DKC2 uncharacterized protein LOC1110212753.4e-3192.31Show/hide
Query:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS
        MVFSSLIVLSVAHLSADA QC A FPDRLTSHQLLYLLFGFPLQQLSRLALS WTF CVPPPGSFYYYYYSSDSD+SS
Subjt:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS

A0A6J1H2D5 uncharacterized protein LOC1114598032.2e-3088.61Show/hide
Query:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSSE
        MVF+SLIVLSVAHLSADA QC AR PDRLTSHQLLY+LF +PLQQLSRLALS+WTFLCVPPPGSFYYYYYSSD DSSSE
Subjt:  MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55365.1 unknown protein1.2e-1247.5Show/hide
Query:  MVFSSLIVLSVAHLSADAWQCTARFP--DRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS
        MVF+S +V++VA +S D WQ   R P   R+ + QL  +   FP+ QLSR  L LWTF+C+P   SFY Y Y + S SSS
Subjt:  MVFSSLIVLSVAHLSADAWQCTARFP--DRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSS

AT5G56520.1 unknown protein7.2e-1044.16Show/hide
Query:  MVFSSLIVLSVAHLSADAWQCTARFP--DRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSD
        MVF    V+SVAH+SA+ +Q     P  DR++S ++L L+  FPLQQL R  L  W ++CVPPP   Y+     D D
Subjt:  MVFSSLIVLSVAHLSADAWQCTARFP--DRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTTAGCAGCTTAATTGTGTTATCGGTCGCTCATTTATCGGCGGATGCTTGGCAATGCACTGCACGCTTTCCTGATCGCCTCACCAGCCACCAACTTCTTTACCT
TCTCTTCGGTTTCCCTCTTCAACAACTCTCTCGCCTCGCCCTCTCTCTATGGACCTTCCTCTGTGTCCCTCCCCCTGGTTCCTTCTACTATTACTACTACTCCTCTGATT
CCGATTCTTCTTCCGAATGA
mRNA sequenceShow/hide mRNA sequence
ACCCGATTTGAAAGCTTCGCTGTCGAGTTTGTCGCAGCACATCAATGATCTGTAGTGACACGAAATTCGGAAAGAAAATGCAGTAAAATGGGTCAAACTCATAAGGGAAG
GGAGTGGGCGAATCCTTCAAACCAAAGTTGAAGATCAAACCACAAACCCCATTGAAGAAGAAGAACACAGACCCACCGAAATCACTAATCAGGCACATAATTATCTCCTT
CATCCACAGACAAATCAATGGTATTTAGCAGCTTAATTGTGTTATCGGTCGCTCATTTATCGGCGGATGCTTGGCAATGCACTGCACGCTTTCCTGATCGCCTCACCAGC
CACCAACTTCTTTACCTTCTCTTCGGTTTCCCTCTTCAACAACTCTCTCGCCTCGCCCTCTCTCTATGGACCTTCCTCTGTGTCCCTCCCCCTGGTTCCTTCTACTATTA
CTACTACTCCTCTGATTCCGATTCTTCTTCCGAATGACTTCTCTCTCTGAGTTCATCGAGTATGATAGAAACTGACAGCGAGCGTGTATTGAAGACAACACCATATATTA
CTTGAATTGAAAGATTGCTTACTAGTTCGTCGACTGAGTGATCTAAACCAACGCCATCTTTTGTGCCTTCTGAAGTAAAGTTTGTTTTCTTTGATTTCGTTGGTTGAGGG
TGGACGCCTGGAGTTGCAGTCCCATTCTAGCATCTGAGCAGTTCCTTAGCAAGTTTTGTGTGAATGTGATTGTGAGAAAAGTATCCAAAGAGTCTTCACCAATTCGGTTG
CAGTCCATGTCCAGTGTGTCTCACTTCCAAGTTCCAACAGCTTCTTTTTTTTGAAAAGTTGTACCAAACCATGTACAGTACATGAAGGCATTGGGTTGCCTACCTCTTTT
GGCTTGTACTCATGGATTAGCACCACGGTGGCTGAGTTTGTAAATATGGTTTTTTCCTGCTTGGGGATGGTAACAATGAAAAAGTGAAAGAAGAGTACCAGAAATGTGTG
TTTACACTTTCAGTGAGCTGACCTTAGACTGATGTTCATTTGTAGAGCATTTTCAGATTCCAGCTCGGGTTGCCTTATGTTAAAGTCGGGGTTCATCAGTCAGCTTGACC
TGACATTGTGTGGATCATTTGAGAAATGATGGTGTTAGATATTTGACATGGATTGTAAGGAATGAATGTCTGTCTGTAAGTAAAAAGTGCTTGGTAGAGAATCACTTTTA
TGCTAATAATCCGTGAGGGATGGAATTGGTTTGATCAGGTGTTTGACTGTGGACAGAGGAAGTTGTAATGATTTATTTTTGTGAAAAAGCACCAATCACGGCAAACAAAC
AGCGCCCAATCCAACCCACATGCTAATTATTGAGCCCAAGATCACATAATACAATCATGAAGATAAAACTCAAGATCAGTGTTGCTTTTGAATTTGGTGTACAAAATGTC
TTGATCCGTTTAATTCTCAAAGTAGAGAGAGAGAGAGCAGATGAGGTTGGTGTTTGTTGGGAGGATTGGAAAGCAGCTGTTTTTAGTACAACACAAGTGGATGAGAGAAT
TTAAACCTCCGACCCCAAGAAAAGAAAAGACGTACATGTCAATTATTGTTGAGCTATCTCACGTTTCAGTTTGTCGAAAGACAAGTGAAATATGAGAATTTAACCCTCTG
ATCTCAAGAAAATGAGTCGATGTCAATTATTGTTGAGCTAAACTCATCGGTGGAATGCAACTATTTTGATCCACATGATAATAATCAATTAAATTCGGATCACTCACTTG
TCTTTCAATTTCAGATCTGCTTTAACTCCTCTTCCCCACCACCATTTTGGCCTCTAGCTCCAACCTCCCTATAATTTCCCTCTAAGAAATTTTGTGTCATCCATGGTCCA
CCATCCACTTTTATCATTCATTTATGTGAACTGTCTGTCATCTATTCCTTTTCATCCATATCTGTATATATTAAAATCATTGCCAGTTTGTGCCTCCTTGTAGCATTTGA
ATGTAGGGTAAAATGGTATTTATTTGGTATTTGACTC
Protein sequenceShow/hide protein sequence
MVFSSLIVLSVAHLSADAWQCTARFPDRLTSHQLLYLLFGFPLQQLSRLALSLWTFLCVPPPGSFYYYYYSSDSDSSSE