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Tan0005066 (gene) of Snake gourd v1 genome

Gene IDTan0005066
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 4
Genome locationLG03:59905271..59905639
RNA-Seq ExpressionTan0005066
SyntenyTan0005066
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588676.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2954.92Show/hide
Query:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        MG MKLC FL ++ VV  P S A  E++   +    +  ++FFGG + + ++E+  R  LFQYG+   K +RK+YLSYYALR+NNIPCGRRG+SYYDC+K
Subjt:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCGALAGCARFLD
        R R+NPYRRGC A+ GCARF D
Subjt:  RERVNPYRRGCGALAGCARFLD

XP_022925244.1 protein RALF-like 31 [Cucurbita moschata]7.0e-3059.35Show/hide
Query:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCR
        MG MKLC  L ++VV   P  S            Y +PD+AFFGG+ P  ++E+ GR LLFQYGYD T K  R++YLSY AL  NNIPCGRRGSSYYDCR
Subjt:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCR

Query:  KRERVNPYRRGCGALAGCARFLD
        KR R+NPYRRGC A+ GCARF D
Subjt:  KRERVNPYRRGCGALAGCARFLD

XP_022989015.1 protein RALF-like 4 [Cucurbita maxima]5.9e-2953.28Show/hide
Query:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        M  MK+C FL ++  VV P S AF E++ D +    +  ++FFGG + + ++E+  R  LFQYG+     +RK++L+YYAL KNNIPCGRRGSSYYDC+K
Subjt:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCGALAGCARFLD
        R R+NPYRRGC A+ GCARF D
Subjt:  RERVNPYRRGCGALAGCARFLD

XP_023531888.1 protein RALF-like 4 [Cucurbita pepo subsp. pepo]1.0e-2854.92Show/hide
Query:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        MG MKLC FL ++ VVV P S AF E++   +       ++FFGG + + ++E+  R  LFQYG+     +RK+ LSYYAL KNNIPCGRRG+SYYDC+K
Subjt:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCGALAGCARFLD
        R R+NPYRRGC A+ GCARF D
Subjt:  RERVNPYRRGCGALAGCARFLD

XP_038876152.1 uncharacterized protein LOC120068449 [Benincasa hispida]4.5e-2956.56Show/hide
Query:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        MG MKLC FL ++V  V+P S A+     DW  AYG+P++AF+G  TP    E++ R LLFQYG+   KY R +YLSY ALRKNN+PCG RG SYYDC +
Subjt:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCGALAGCARFLD
         ++ NPYRRGC A+ GCARF D
Subjt:  RERVNPYRRGCGALAGCARFLD

TrEMBL top hitse value%identityAlignment
A0A6J1EBL1 protein RALF-like 313.4e-3059.35Show/hide
Query:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCR
        MG MKLC  L ++VV   P  S            Y +PD+AFFGG+ P  ++E+ GR LLFQYGYD T K  R++YLSY AL  NNIPCGRRGSSYYDCR
Subjt:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYD-TTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCR

Query:  KRERVNPYRRGCGALAGCARFLD
        KR R+NPYRRGC A+ GCARF D
Subjt:  KRERVNPYRRGCGALAGCARFLD

A0A6J1EI16 protein RALF-like 191.4e-2853.28Show/hide
Query:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        MG MKL  F+ ++ VV  P S A  E++   +    +  ++FFGG + + ++E+  R  LFQYG+   K +RK+YLSYYALR+NNIPCGRRG+SYYDC+K
Subjt:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCGALAGCARFLD
        R R+NPYRRGC A+ GCARF D
Subjt:  RERVNPYRRGCGALAGCARFLD

A0A6J1EIU0 protein RALF-like 49.2e-2852.03Show/hide
Query:  MGLMKLCQF-LFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCR
        M  +KLC F LF++ VV  P S A+ E++ D +       ++FFGG + + ++E+  R  LFQYG+   K +R+++L+YYAL KNNIPCGRRG+SYYDC+
Subjt:  MGLMKLCQF-LFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCR

Query:  KRERVNPYRRGCGALAGCARFLD
        KR R+NPYRRGC A+ GCARF D
Subjt:  KRERVNPYRRGCGALAGCARFLD

A0A6J1JL71 protein RALF-like 42.8e-2953.28Show/hide
Query:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        M  MK+C FL ++  VV P S AF E++ D +    +  ++FFGG + + ++E+  R  LFQYG+     +RK++L+YYAL KNNIPCGRRGSSYYDC+K
Subjt:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCGALAGCARFLD
        R R+NPYRRGC A+ GCARF D
Subjt:  RERVNPYRRGCGALAGCARFLD

A0A6J1JN66 protein RALF-like 48.3e-2954.1Show/hide
Query:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK
        MG MKL  FL ++ VVV P S A  E++   +    + +++FFGG + + ++E+  R  LFQYG+   K +RK+YLSYYALR+NNIPCGRRG+SYYDC+K
Subjt:  MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRK

Query:  RERVNPYRRGCGALAGCARFLD
        R  +NPYRRGC A+ GCARF D
Subjt:  RERVNPYRRGCGALAGCARFLD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 197.3e-1465.31Show/hide
Query:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR
        +R+ Y+SY ALRKNN+PC RRG SYYDC+KR+R NPYRRGC  +  C R
Subjt:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR

Q8L9P8 Protein RALF-like 331.7e-1058.7Show/hide
Query:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR
        KY+SY ALR+N +PC RRG+SYY+CR+  + NPY RGC A+  C R
Subjt:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR

Q9FZA0 Protein RALF-like 44.7e-1362.5Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCARF
        ++Y+ Y AL+KNN+PC RRG SYYDC+KR R NPYRRGC A+  C R+
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCARF

Q9LUS7 Rapid alkalinization factor 231.7e-1057.45Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR
        ++Y+SY ALR+N IPC RRG+SYY+CR+  + NPY RGC A+  C R
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR

Q9MA62 Protein RALF-like 223.4e-1134.55Show/hide
Query:  LFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRR
        +  IV+     +  F +S  D+ RA  S  F+   G   + ++EE    + F         ++KKY+SY A+R+N++PC RRG+SYY+C++  + NPY R
Subjt:  LFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRR

Query:  GCGALAGCAR
        GC  +  C R
Subjt:  GCGALAGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 43.3e-1462.5Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCARF
        ++Y+ Y AL+KNN+PC RRG SYYDC+KR R NPYRRGC A+  C R+
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCARF

AT2G33775.1 ralf-like 195.2e-1565.31Show/hide
Query:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR
        +R+ Y+SY ALRKNN+PC RRG SYYDC+KR+R NPYRRGC  +  C R
Subjt:  SRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR

AT3G05490.1 ralf-like 222.4e-1234.55Show/hide
Query:  LFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRR
        +  IV+     +  F +S  D+ RA  S  F+   G   + ++EE    + F         ++KKY+SY A+R+N++PC RRG+SYY+C++  + NPY R
Subjt:  LFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRR

Query:  GCGALAGCAR
        GC  +  C R
Subjt:  GCGALAGCAR

AT3G16570.1 rapid alkalinization factor 231.2e-1157.45Show/hide
Query:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR
        ++Y+SY ALR+N IPC RRG+SYY+CR+  + NPY RGC A+  C R
Subjt:  KKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR

AT4G15800.1 ralf-like 331.2e-1158.7Show/hide
Query:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR
        KY+SY ALR+N +PC RRG+SYY+CR+  + NPY RGC A+  C R
Subjt:  KYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRGCGALAGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGATGAAGCTCTGCCAATTTCTCTTCATCATTGTGGTCGTCGTCACCCCTCATTCTTCTGCTTTTCCTGAAAGCACGAAGGACTGGGCTCGAGCCTACGGCAG
TCCCGATTTTGCCTTCTTTGGTGGATTCACACCTGACGGGGTGAGCGAAGAACATGGTCGACATCTACTTTTTCAATATGGATACGATACGACGAAGTACTCTCGTAAGA
AGTATTTGAGTTACTATGCGCTTAGGAAGAACAACATACCTTGTGGTCGTCGTGGTAGCTCTTACTATGACTGTAGGAAGCGTGAGAGGGTCAACCCTTATCGTCGTGGC
TGCGGTGCCTTAGCCGGTTGCGCTCGGTTCCTCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTGATGAAGCTCTGCCAATTTCTCTTCATCATTGTGGTCGTCGTCACCCCTCATTCTTCTGCTTTTCCTGAAAGCACGAAGGACTGGGCTCGAGCCTACGGCAG
TCCCGATTTTGCCTTCTTTGGTGGATTCACACCTGACGGGGTGAGCGAAGAACATGGTCGACATCTACTTTTTCAATATGGATACGATACGACGAAGTACTCTCGTAAGA
AGTATTTGAGTTACTATGCGCTTAGGAAGAACAACATACCTTGTGGTCGTCGTGGTAGCTCTTACTATGACTGTAGGAAGCGTGAGAGGGTCAACCCTTATCGTCGTGGC
TGCGGTGCCTTAGCCGGTTGCGCTCGGTTCCTCGATTAA
Protein sequenceShow/hide protein sequence
MGLMKLCQFLFIIVVVVTPHSSAFPESTKDWARAYGSPDFAFFGGFTPDGVSEEHGRHLLFQYGYDTTKYSRKKYLSYYALRKNNIPCGRRGSSYYDCRKRERVNPYRRG
CGALAGCARFLD