; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005082 (gene) of Snake gourd v1 genome

Gene IDTan0005082
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGamma-secretase subunit PEN-2
Genome locationLG07:14424933..14429394
RNA-Seq ExpressionTan0005082
SyntenyTan0005082
Gene Ontology termsGO:0007219 - Notch signaling pathway (biological process)
GO:0005798 - Golgi-associated vesicle (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070765 - gamma-secretase complex (cellular component)
InterPro domainsIPR019379 - Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605326.1 putative gamma-secretase subunit PEN-2, partial [Cucurbita argyrosperma subsp. sororia]7.0e-6692.81Show/hide
Query:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
        ME+SQNPN    TNPN NPNRIQNPVSS IAALWPTID SLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFA+
Subjt:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV

Query:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLT
        FMAIISSWALTFSIGGERLFGPVW KLVMYNLADKLGLT
Subjt:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLT

XP_022946973.1 probable gamma-secretase subunit PEN-2 [Cucurbita moschata]2.6e-6892.96Show/hide
Query:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
        ME+SQNPN    TNPN NPNRIQNPVSS IAALWPTID SLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFA+
Subjt:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV

Query:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS
        FMAIISSWALTFSIGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS

XP_023007265.1 probable gamma-secretase subunit PEN-2 [Cucurbita maxima]1.4e-6692.25Show/hide
Query:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
        ME+SQNPN    T PN NPNRIQNPVSS IAALWPTID SLGLS EESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
Subjt:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV

Query:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS
        FMAIISSWALTFSIGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS

XP_023532347.1 probable gamma-secretase subunit PEN-2 [Cucurbita pepo subsp. pepo]1.3e-6792.25Show/hide
Query:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
        ME+S NPN    TNPN NP RIQNPVSS IAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFA+
Subjt:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV

Query:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS
        FMAIISSWALTFSIGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS

XP_038900346.1 probable gamma-secretase subunit PEN-2 [Benincasa hispida]7.0e-6692.25Show/hide
Query:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
        ME+SQNPNTN  TN NPNPNRIQNPVSSPIA LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR S SFPRIRPYIVGSAIGF V
Subjt:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV

Query:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS
        FMAIISSWALTFSIGGERLFG VW KLVMYNLAD+LGLTGWS
Subjt:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS

TrEMBL top hitse value%identityAlignment
A0A6J1DR09 probable gamma-secretase subunit PEN-22.3e-6285.92Show/hide
Query:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
        ME SQNPNTNP            NPVSSPIAALWPTID SLGLSEEESVSYAR FYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
Subjt:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV

Query:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS
        FMAI+SSWALTF+IGGERLFGPVW KLVMYN+ADKLGLTGW+
Subjt:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS

A0A6J1F097 probable gamma-secretase subunit PEN-21.9e-6490.85Show/hide
Query:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
        ME SQN N    +NPNPNP RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR SHSFPRIRPYIVGSAIGFAV
Subjt:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV

Query:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS
        FMAIISSWALTF+IGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS

A0A6J1G5B2 probable gamma-secretase subunit PEN-21.2e-6892.96Show/hide
Query:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
        ME+SQNPN    TNPN NPNRIQNPVSS IAALWPTID SLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFA+
Subjt:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV

Query:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS
        FMAIISSWALTFSIGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS

A0A6J1I943 probable gamma-secretase subunit PEN-22.3e-6289.44Show/hide
Query:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
        ME SQN N    +N NPNP RIQN VSSPIA LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR S SFPRIRPYIVGSAIGFAV
Subjt:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV

Query:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS
        FMAIISSWALTF+IGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS

A0A6J1L2H7 probable gamma-secretase subunit PEN-26.8e-6792.25Show/hide
Query:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
        ME+SQNPN    T PN NPNRIQNPVSS IAALWPTID SLGLS EESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV
Subjt:  METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAV

Query:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS
        FMAIISSWALTFSIGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  FMAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTGWS

SwissProt top hitse value%identityAlignment
Q5G235 Gamma-secretase subunit PEN-28.2e-0936.17Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFP------RIRPYIVGSAIGFAVFMAIISSWALTFSIGGERLFGPVWGKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+   R++   P      +I+ Y+  SA+GF +++ ++S+W   F I     + P WG L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFP------RIRPYIVGSAIGFAVFMAIISSWALTFSIGGERLFGPVWGKLVMY

Q6QI68 Gamma-secretase subunit PEN-24.1e-0834.07Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSF---PRIRPYIVGSAIGFAVFMAIISSWALTFSIGGERLFGPVWGKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+     + ++    +I+ Y+  SA+GF  ++ ++++W   F I     + P WG L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSF---PRIRPYIVGSAIGFAVFMAIISSWALTFSIGGERLFGPVWGKLVMY

Q9CQR7 Gamma-secretase subunit PEN-22.4e-0836.17Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFP------RIRPYIVGSAIGFAVFMAIISSWALTFSIGGERLFGPVWGKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+   R++   P      +I+ Y+  SA+GF  ++ I+++W   F I     + P WG L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFP------RIRPYIVGSAIGFAVFMAIISSWALTFSIGGERLFGPVWGKLVMY

Q9FY84 Probable gamma-secretase subunit PEN-23.3e-5069.78Show/hide
Query:  SQNPNTNPSTNPNPNPNRIQNPVSSPI--AALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAVF
        S +P+ NP  N NPNPN   NP+S+ I  A +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR S +FP+IR Y+V SAIGF+VF
Subjt:  SQNPNTNPSTNPNPNPNRIQNPVSSPI--AALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAVF

Query:  MAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTG
         A++S+WALTFSIGGE+LFGP++ KLVMYN+AD+LGL+G
Subjt:  MAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTG

Q9NZ42 Gamma-secretase subunit PEN-21.1e-0836.17Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFP------RIRPYIVGSAIGFAVFMAIISSWALTFSIGGERLFGPVWGKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+   R++   P      +I+ Y+  SA+GF  ++ +++SW   F I     + P WG L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFP------RIRPYIVGSAIGFAVFMAIISSWALTFSIGGERLFGPVWGKLVMY

Arabidopsis top hitse value%identityAlignment
AT5G09310.1 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).2.3e-5169.78Show/hide
Query:  SQNPNTNPSTNPNPNPNRIQNPVSSPI--AALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAVF
        S +P+ NP  N NPNPN   NP+S+ I  A +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR S +FP+IR Y+V SAIGF+VF
Subjt:  SQNPNTNPSTNPNPNPNRIQNPVSSPI--AALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAVF

Query:  MAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTG
         A++S+WALTFSIGGE+LFGP++ KLVMYN+AD+LGL+G
Subjt:  MAIISSWALTFSIGGERLFGPVWGKLVMYNLADKLGLTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACCTCGCAGAATCCAAACACAAACCCAAGCACCAACCCAAACCCTAATCCCAATCGTATACAGAATCCCGTATCGTCACCGATTGCTGCTTTATGGCCGACCAT
TGATGGGTCACTGGGGTTGTCGGAGGAAGAGTCGGTGAGCTATGCCCGCAGATTCTATAAATTTGGATTCGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACT
TCTGGCCTGTTCTCCGAGATTCTCACTCTTTTCCTCGCATCCGACCCTATATTGTTGGCTCAGCTATTGGGTTTGCTGTTTTCATGGCCATTATCTCCTCTTGGGCCTTG
ACATTTTCCATTGGAGGAGAACGCCTCTTTGGACCTGTTTGGGGTAAACTAGTGATGTATAACCTCGCTGACAAATTAGGATTGACAGGTTGGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATTTTGCCTAAAATTCGGTTGGTCTTTATTTCTGAGTTATTGGAATTCGTTTGCAATGGAGACCTCGCAGAATCCAAACACAAACCCAAGCACCAACCCAAACCCTAATC
CCAATCGTATACAGAATCCCGTATCGTCACCGATTGCTGCTTTATGGCCGACCATTGATGGGTCACTGGGGTTGTCGGAGGAAGAGTCGGTGAGCTATGCCCGCAGATTC
TATAAATTTGGATTCGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTCCGAGATTCTCACTCTTTTCCTCGCATCCGACCCTATATTGT
TGGCTCAGCTATTGGGTTTGCTGTTTTCATGGCCATTATCTCCTCTTGGGCCTTGACATTTTCCATTGGAGGAGAACGCCTCTTTGGACCTGTTTGGGGTAAACTAGTGA
TGTATAACCTCGCTGACAAATTAGGATTGACAGGTTGGAGCTAGTCTGGTTCCCTCCTTTCACTTTCAGCATCTAATTTCGATCTTTCTTGTATATTTCAAAATGTGTAA
CTCTCTACTGTCATTCTTTTTTTTCCAAAGATCAAAGTTGAAGCTTTTGGTTTTACTCCAACTGCTTCAAGGTTCAAACATAAACATACAGATGCTCATTTAAGAATCCC
CCCTCCTGATAAGAAACAAAAGGGGTCTCATATTTAAACATAATCGACATGAAAATTAAATGGTTTAAAGAACACGAATACCACATTGCCTTGCCGATGCTGGTTAGTTT
AAATCGGTCGTTCCTTCAGCTGTGCTGACTGAGATTTGTGGATGGAGTACTAAACTGGTTCTCTTGATTTCTCCTTTGCTTCCTTTTTCTCCTACTTTCATTACTATAAA
CTGTGCCCTCTTTTCTGGTACCCCTACTTCAGAACATTCAGTTTTCAGGTGGAAAACATCTGATGTTAGAAACTTTGTTAAAATTCTTAAGAAGGAACAGCGTAGAATGC
ATCAACAAGCACGAAGAAAGGTAGGATTGTGTATTTCTACAATGTGATTAAGAAAAAAAAAAAAAGGGAGCAGTGGGAGATTTTATTAGGATATTGTTGTATTCCCAATT
TGAGACATATCTGTCACAGTTGATTCAGCGTATCAGATAGCATTGAAACAAGTTTGTTTTCAAATACTACTTTTGGATAATTGCCTTTATCAGATTAAGCTATGATTCAC
TTGATTAACTTTGGTAATTAGAAATACTAATCTCTTGATGTTTTTGTGGCGCTATCAATACTCCAAGTAGGGAAAAGCCAATCACCAAAATAGACACAAGAGGGAGCCAA
AAGACTTGCTAGAAATAGTGAAGGATGGATAGGGTTGGTGGGGGATCTGCTTCTTCAATGGTGTGTGTTTGGTTAGGTGTTCTTTATTACTATTATTCTTTTTAATATGA
TTTTTCTATTTTAGAGCACATGGG
Protein sequenceShow/hide protein sequence
METSQNPNTNPSTNPNPNPNRIQNPVSSPIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRDSHSFPRIRPYIVGSAIGFAVFMAIISSWAL
TFSIGGERLFGPVWGKLVMYNLADKLGLTGWS