| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa] | 3.8e-257 | 47.3 | Show/hide |
Query: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
+SS+ +++LA +KL G+N+ +WKN IN +L+ DDL+FVL E+C Q+P++ A+++VR+ Y+RW +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ+
Subjt: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
Query: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
MFGQ S+Q+KH +LK+++NARM EGASVREHVL+MM HFN+A MN A IDE+SQVSFILE+LP+SFLQFRSN VM KI YTLTTLLNELQ F+SLM+I+
Subjt: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
Query: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKNQEIDSWQPLREG
+ E NVA R HRGSTSGTK + PS KK K+G KA+ A+A+ KK K A KG CF CN + HW RNCPK+L+++K ++G
Subjt: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKNQEIDSWQPLREG
Query: EVTLRV------GSEEIVSTVAID-----KVK--------LYFDRNYLLLDNMYIVLGKSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDY
++T R ++E + V D VK + F +Y +Y++ KSE LEKFKEYK EVEN L KTIKT RSDRGGEYMD +FQ+Y
Subjt: EVTLRV------GSEEIVSTVAID-----KVK--------LYFDRNYLLLDNMYIVLGKSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDY
Query: MIEHRIMSQLSAP---------------------------------------------------------------------------------------
++E I+SQLSAP
Subjt: MIEHRIMSQLSAP---------------------------------------------------------------------------------------
Query: -----------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRC
GYPK TRGG F DPKDN+V VSTNATFLEEDHIR+H PRSKIVLNE+ ST + A V SST + + Q L PR
Subjt: -----------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRC
Query: SGRVVRQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKG
SGRV P YM L ET V D D ED LT+ + M DVDKD+WIKAM+ E+ESMYFN W+ DQPDG K IGCKWIYKRKRG DGKVQTFKARLVAKG
Subjt: SGRVVRQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKG
Query: FTEVEGVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYG
+T+VEGVDYEETFSP+ M+ SIRI+L+I AY+DY+ EQK+C+L+RSIYGLKQASR WNI FD AIKSYG
Subjt: FTEVEGVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYG
Query: FDQNDDEPYVYKKIIDKTVAFLILYVDDILLIGN------------------------------------------------------------------
FDQ DEP VYK+II+K+VAFL+LYVDDILLIGN
Subjt: FDQNDDEPYVYKKIIDKTVAFLILYVDDILLIGN------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ETDKYSRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKY
+TD+ SRKSTSGS F LNGG V+WR+IK GCIADSTMEAEYVA CEA KEAVWLR F+ DLEV+PNM+ PITL+C GAVANS EP SHKRGKHIERKY
Subjt: ETDKYSRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKY
Query: HLIREIVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
HLIREIVHRGDV VTQ AS HNVADPFTKPL AKVFEGHLESLG R +P+
Subjt: HLIREIVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
|
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| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-252 | 41.86 | Show/hide |
Query: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
M+S+ +++LA +KL G+N+ +WKN INT+L+ DDL+FVL EEC Q+P++ A+++VR+ Y+RW +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ+
Subjt: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
Query: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
MFGQ S+Q+KH +LK+++NARM EGASVREHVL+MM HFN+AEMNGA IDE+SQVSFILE+LP+SFLQFRSN VM KI YTLTTLLNELQ F+SLM+I+
Subjt: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
Query: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
+ E NVA R HRGSTSGTK + PS KK K+G KA+ A+A+ KK K A KG CFHCN + HW RNCPK+L+E+K
Subjt: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
Query: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Q I SW+ L GE+T+RVG+ +VS +A+ ++L +++LLL+N+Y+V
Subjt: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Query: ------------------------------------------------------------LG--------------------------------------
LG
Subjt: ------------------------------------------------------------LG--------------------------------------
Query: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
KSE LEKFKEYK EVEN L KTIKT RSDRGGEYMD +FQ+Y++E
Subjt: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
Query: IMSQLSAP--------------------------------------------------------------------------------------------
I+SQLSAP
Subjt: IMSQLSAP--------------------------------------------------------------------------------------------
Query: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
GYPK TRGG F DPKDN+V VSTNATFLEEDHIR+H PRSKIVLNE+ ST + A T V SST + + Q L PR SGRV
Subjt: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
Query: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
P YM L ET V D D ED LT+ + M DVDKD+WIKAM+ E+ESMYFN W+ DQPDG K IGCKWIYKRKRG DGKVQTFKARLVAKG+T+VE
Subjt: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
Query: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
GVDYEETFSP+ M+ SIRI+L+I AY+DY+ EQK+C+L+RSIYGLKQASR WNI FD AIKSYGFDQ
Subjt: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
Query: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
DEP VYK+II+K+VAFL+LYVDDILLIGN
Subjt: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------ETDKY
+TD+
Subjt: -----------------------------------------------------------------------------------------------ETDKY
Query: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
SRKSTSGS F LNGG V+WR+IK GCIADSTMEAEYVA CEA KEAVWLR F+ DLEV+PNM+ PITL+C GAVANS EP SHKRGKHIERKYHLIRE
Subjt: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
Query: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
IVHRGDV VTQ AS HNVADPFTKPL AKVFEGHLESLG R +P+
Subjt: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 3.7e-252 | 41.86 | Show/hide |
Query: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
M+S+ +++LA +KL G+N+ +WKN INT+L+ DDL+FVL EEC Q+P++ A+++VR+ Y+RW +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ+
Subjt: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
Query: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
MFGQ S+Q+KH +LK+++NARM EGASVREHVL+MM HFN+AEMNGA IDE+SQVSFILE+LP+SFLQFRSN VM KI YTLTTLLNELQ F+SLM+I+
Subjt: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
Query: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
+ E NVA R HRGSTSGTK + PS KK K+G KA+ A+A+ KK K A KG CFHCN + HW RNCPK+L+E+K
Subjt: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
Query: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Q I SW+ L GE+T+RVG+ +VS +A+ ++L +++LLL+N+Y+V
Subjt: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Query: ------------------------------------------------------------LG--------------------------------------
LG
Subjt: ------------------------------------------------------------LG--------------------------------------
Query: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
KSE LEKFKEYK EVEN L KTIKT RSDRGGEYMD +FQ+Y++E
Subjt: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
Query: IMSQLSAP--------------------------------------------------------------------------------------------
I+SQLSAP
Subjt: IMSQLSAP--------------------------------------------------------------------------------------------
Query: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
GYPK TRGG F DPKDN+V VSTNATFLEEDHIR+H PRSKIVLNE+ ST + A T V SST + + Q L PR SGRV
Subjt: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
Query: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
P YM L ET V D D ED LT+ + M DVDKD+WIKAM+ E+ESMYFN W+ DQPDG K IGCKWIYKRKRG DGKVQTFKARLVAKG+T+VE
Subjt: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
Query: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
GVDYEETFSP+ M+ SIRI+L+I AY+DY+ EQK+C+L+RSIYGLKQASR WNI FD AIKSYGFDQ
Subjt: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
Query: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
DEP VYK+II+K+VAFL+LYVDDILLIGN
Subjt: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------ETDKY
+TD+
Subjt: -----------------------------------------------------------------------------------------------ETDKY
Query: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
SRKSTSGS F LNGG V+WR+IK GCIADSTMEAEYVA CEA KEAVWLR F+ DLEV+PNM+ PITL+C GAVANS EP SHKRGKHIERKYHLIRE
Subjt: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
Query: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
IVHRGDV VTQ AS HNVADPFTKPL AKVFEGHLESLG R +P+
Subjt: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 2.0e-250 | 41.78 | Show/hide |
Query: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
M+S+ +++LA +KL G+N+ +WKN NT+L+ DDL+FVL EEC Q+P++ A+++VR+ Y+RW +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ+
Subjt: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
Query: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
MFGQ S+Q+KH +LK+++NARM EGASVREHVL+MM HFN+AEMNGA IDE+SQVSFILE+LP+SFLQFRSN VM KI YTLTTLLNELQ F+SLM+I+
Subjt: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
Query: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
+ E NVA R HRGSTSGTK + PS KK K+G KA+ A+A+ KK K A KG CFHCN + HW RNCPK+L+E+K
Subjt: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
Query: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Q I SW+ L GE+T+RVG+ +VS +A+ ++L +++LLL+N+Y+V
Subjt: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Query: ------------------------------------------------------------LG--------------------------------------
LG
Subjt: ------------------------------------------------------------LG--------------------------------------
Query: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
KSE LEKFKEYK EVEN L KTIKT RSDRGGEYMD +FQ+Y++E
Subjt: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
Query: IMSQLSAP--------------------------------------------------------------------------------------------
I+SQLSAP
Subjt: IMSQLSAP--------------------------------------------------------------------------------------------
Query: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
GYPK TRGG F DPKDN+V VSTNATFLEEDHIR+H PRSKIVLNE+ ST + A T V SST + + Q L PR SGRV
Subjt: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
Query: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
P YM L ET V D D ED LT+ + M DVDKD+WIKAM+ E+ESMYFN W+ DQPDG K IGCKWIYKRKRG DGKVQTFKARLVAKG+T+VE
Subjt: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
Query: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
GVDYEETFSP+ M+ SIRI+L+I AY+DY+ EQK+C+L+RSIYGLKQASR WNI FD AIKSYGFDQ
Subjt: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
Query: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
DEP VYK+II+K+VAFL+LYVDDILLIGN
Subjt: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------ETDKY
+TD+
Subjt: -----------------------------------------------------------------------------------------------ETDKY
Query: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
SRKSTSGS F LNGG V+WR+IK GCIADSTMEAEYVA CEA KEAVWLR F+ DLEV+PNM+ PITL+C GAVANS EP SHKRGKHIERKYHLIRE
Subjt: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
Query: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
IVHRGDV VTQ AS HNVADPFTKPL AKVFEGHLESLG R +P+
Subjt: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
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| KAA0066490.1 gag/pol protein [Cucumis melo var. makuwa] | 8.0e-255 | 48.17 | Show/hide |
Query: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
M+S+ +++LA +KL G+N+ +WKN INT+L+ DDL+FVL EEC Q+P++ A+++VR+ Y+RW +ANEKA+ YI+ASLSEVLAKKHE ++TA+EIM+SLQ+
Subjt: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
Query: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
MFGQ S+Q+KH +LK+++NARM EGASVREHVL+MM HF++AEMNGA IDE+SQVSFILE+LP+SFLQFRSN VM KI YTLTTLLNELQ F+SLM+I+
Subjt: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
Query: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKNQEIDSWQPLREG
+ E NVA R HRGSTSGTK + PS KK K+G KA+ A+A+ KK K A KG CFHCN + HW RNCPK+L+E+K +
Subjt: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKNQEIDSWQPLREG
Query: EVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIVLGKSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHRIMSQLSAP------
+ LEKFKEYK EVEN L KTIKT RSDR GEYMD +FQ+Y++E I+SQLSAP
Subjt: EVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIVLGKSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHRIMSQLSAP------
Query: --------------------------------------------------------------------------------------------GYPKDTRG
GYPK TRG
Subjt: --------------------------------------------------------------------------------------------GYPKDTRG
Query: GLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVVRQPECYMGLAETQV
G F DPKDN+V VSTNATFLEEDHIR+H PRSKIVLNE+ ST + A V SST + + Q L PR SGRV P YM L ET
Subjt: GLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVVRQPECYMGLAETQV
Query: VNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMV
V D D ED LT+ + M DVDKD+WIKAM+ E++SMYFN W+ DQPDG K IGCKWIYKRKRG DGKVQTF+ARLVAKG+T+VEGVDYE+TFSP+ M+
Subjt: VNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMV
Query: NSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVYKKIIDKTV
SIRI+L+I AY+DY+ EQK+C+L+RSIYGLKQASR WNI FD AIKSYGFDQ DEP VYK+II+K+V
Subjt: NSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVYKKIIDKTV
Query: AFLILYVDDILLIGN-------------------------------------------------------------------------------------
AFL+LYVDDILLI N
Subjt: AFLILYVDDILLIGN-------------------------------------------------------------------------------------
Query: ----------------------------------------ETDKYSRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTD
+TD+ SRKSTSGS F LNGG ++WR+IK GCIADSTMEAEY A CE KEAVWLRKF+ D
Subjt: ----------------------------------------ETDKYSRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTD
Query: LEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIREIVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
LEV+PNM PITL+C G VANS EP SHKRGKHIE KYHLIREIVHRGDV VTQ AS HNVADPFTKPL AKVFEGHLESLG R +P+
Subjt: LEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIREIVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 1.8e-252 | 41.86 | Show/hide |
Query: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
M+S+ +++LA +KL G+N+ +WKN INT+L+ DDL+FVL EEC Q+P++ A+++VR+ Y+RW +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ+
Subjt: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
Query: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
MFGQ S+Q+KH +LK+++NARM EGASVREHVL+MM HFN+AEMNGA IDE+SQVSFILE+LP+SFLQFRSN VM KI YTLTTLLNELQ F+SLM+I+
Subjt: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
Query: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
+ E NVA R HRGSTSGTK + PS KK K+G KA+ A+A+ KK K A KG CFHCN + HW RNCPK+L+E+K
Subjt: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
Query: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Q I SW+ L GE+T+RVG+ +VS +A+ ++L +++LLL+N+Y+V
Subjt: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Query: ------------------------------------------------------------LG--------------------------------------
LG
Subjt: ------------------------------------------------------------LG--------------------------------------
Query: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
KSE LEKFKEYK EVEN L KTIKT RSDRGGEYMD +FQ+Y++E
Subjt: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
Query: IMSQLSAP--------------------------------------------------------------------------------------------
I+SQLSAP
Subjt: IMSQLSAP--------------------------------------------------------------------------------------------
Query: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
GYPK TRGG F DPKDN+V VSTNATFLEEDHIR+H PRSKIVLNE+ ST + A T V SST + + Q L PR SGRV
Subjt: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
Query: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
P YM L ET V D D ED LT+ + M DVDKD+WIKAM+ E+ESMYFN W+ DQPDG K IGCKWIYKRKRG DGKVQTFKARLVAKG+T+VE
Subjt: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
Query: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
GVDYEETFSP+ M+ SIRI+L+I AY+DY+ EQK+C+L+RSIYGLKQASR WNI FD AIKSYGFDQ
Subjt: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
Query: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
DEP VYK+II+K+VAFL+LYVDDILLIGN
Subjt: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------ETDKY
+TD+
Subjt: -----------------------------------------------------------------------------------------------ETDKY
Query: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
SRKSTSGS F LNGG V+WR+IK GCIADSTMEAEYVA CEA KEAVWLR F+ DLEV+PNM+ PITL+C GAVANS EP SHKRGKHIERKYHLIRE
Subjt: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
Query: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
IVHRGDV VTQ AS HNVADPFTKPL AKVFEGHLESLG R +P+
Subjt: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
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| A0A5A7SNP8 Gag/pol protein | 1.9e-257 | 47.3 | Show/hide |
Query: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
+SS+ +++LA +KL G+N+ +WKN IN +L+ DDL+FVL E+C Q+P++ A+++VR+ Y+RW +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ+
Subjt: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
Query: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
MFGQ S+Q+KH +LK+++NARM EGASVREHVL+MM HFN+A MN A IDE+SQVSFILE+LP+SFLQFRSN VM KI YTLTTLLNELQ F+SLM+I+
Subjt: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
Query: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKNQEIDSWQPLREG
+ E NVA R HRGSTSGTK + PS KK K+G KA+ A+A+ KK K A KG CF CN + HW RNCPK+L+++K ++G
Subjt: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKNQEIDSWQPLREG
Query: EVTLRV------GSEEIVSTVAID-----KVK--------LYFDRNYLLLDNMYIVLGKSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDY
++T R ++E + V D VK + F +Y +Y++ KSE LEKFKEYK EVEN L KTIKT RSDRGGEYMD +FQ+Y
Subjt: EVTLRV------GSEEIVSTVAID-----KVK--------LYFDRNYLLLDNMYIVLGKSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDY
Query: MIEHRIMSQLSAP---------------------------------------------------------------------------------------
++E I+SQLSAP
Subjt: MIEHRIMSQLSAP---------------------------------------------------------------------------------------
Query: -----------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRC
GYPK TRGG F DPKDN+V VSTNATFLEEDHIR+H PRSKIVLNE+ ST + A V SST + + Q L PR
Subjt: -----------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRC
Query: SGRVVRQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKG
SGRV P YM L ET V D D ED LT+ + M DVDKD+WIKAM+ E+ESMYFN W+ DQPDG K IGCKWIYKRKRG DGKVQTFKARLVAKG
Subjt: SGRVVRQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKG
Query: FTEVEGVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYG
+T+VEGVDYEETFSP+ M+ SIRI+L+I AY+DY+ EQK+C+L+RSIYGLKQASR WNI FD AIKSYG
Subjt: FTEVEGVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYG
Query: FDQNDDEPYVYKKIIDKTVAFLILYVDDILLIGN------------------------------------------------------------------
FDQ DEP VYK+II+K+VAFL+LYVDDILLIGN
Subjt: FDQNDDEPYVYKKIIDKTVAFLILYVDDILLIGN------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ETDKYSRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKY
+TD+ SRKSTSGS F LNGG V+WR+IK GCIADSTMEAEYVA CEA KEAVWLR F+ DLEV+PNM+ PITL+C GAVANS EP SHKRGKHIERKY
Subjt: ETDKYSRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKY
Query: HLIREIVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
HLIREIVHRGDV VTQ AS HNVADPFTKPL AKVFEGHLESLG R +P+
Subjt: HLIREIVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
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| A0A5A7TZD7 Gag/pol protein | 9.9e-251 | 41.78 | Show/hide |
Query: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
M+S+ +++LA +KL G+N+ +WKN NT+L+ DDL+FVL EEC Q+P++ A+++VR+ Y+RW +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ+
Subjt: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
Query: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
MFGQ S+Q+KH +LK+++NARM EGASVREHVL+MM HFN+AEMNGA IDE+SQVSFILE+LP+SFLQFRSN VM KI YTLTTLLNELQ F+SLM+I+
Subjt: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
Query: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
+ E NVA R HRGSTSGTK + PS KK K+G KA+ A+A+ KK K A KG CFHCN + HW RNCPK+L+E+K
Subjt: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
Query: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Q I SW+ L GE+T+RVG+ +VS +A+ ++L +++LLL+N+Y+V
Subjt: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Query: ------------------------------------------------------------LG--------------------------------------
LG
Subjt: ------------------------------------------------------------LG--------------------------------------
Query: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
KSE LEKFKEYK EVEN L KTIKT RSDRGGEYMD +FQ+Y++E
Subjt: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
Query: IMSQLSAP--------------------------------------------------------------------------------------------
I+SQLSAP
Subjt: IMSQLSAP--------------------------------------------------------------------------------------------
Query: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
GYPK TRGG F DPKDN+V VSTNATFLEEDHIR+H PRSKIVLNE+ ST + A T V SST + + Q L PR SGRV
Subjt: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
Query: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
P YM L ET V D D ED LT+ + M DVDKD+WIKAM+ E+ESMYFN W+ DQPDG K IGCKWIYKRKRG DGKVQTFKARLVAKG+T+VE
Subjt: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
Query: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
GVDYEETFSP+ M+ SIRI+L+I AY+DY+ EQK+C+L+RSIYGLKQASR WNI FD AIKSYGFDQ
Subjt: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
Query: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
DEP VYK+II+K+VAFL+LYVDDILLIGN
Subjt: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------ETDKY
+TD+
Subjt: -----------------------------------------------------------------------------------------------ETDKY
Query: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
SRKSTSGS F LNGG V+WR+IK GCIADSTMEAEYVA CEA KEAVWLR F+ DLEV+PNM+ PITL+C GAVANS EP SHKRGKHIERKYHLIRE
Subjt: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
Query: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
IVHRGDV VTQ AS HNVADPFTKPL AKVFEGHLESLG R +P+
Subjt: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
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| A0A5A7VH46 Gag/pol protein | 3.9e-255 | 48.17 | Show/hide |
Query: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
M+S+ +++LA +KL G+N+ +WKN INT+L+ DDL+FVL EEC Q+P++ A+++VR+ Y+RW +ANEKA+ YI+ASLSEVLAKKHE ++TA+EIM+SLQ+
Subjt: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
Query: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
MFGQ S+Q+KH +LK+++NARM EGASVREHVL+MM HF++AEMNGA IDE+SQVSFILE+LP+SFLQFRSN VM KI YTLTTLLNELQ F+SLM+I+
Subjt: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
Query: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKNQEIDSWQPLREG
+ E NVA R HRGSTSGTK + PS KK K+G KA+ A+A+ KK K A KG CFHCN + HW RNCPK+L+E+K +
Subjt: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKNQEIDSWQPLREG
Query: EVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIVLGKSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHRIMSQLSAP------
+ LEKFKEYK EVEN L KTIKT RSDR GEYMD +FQ+Y++E I+SQLSAP
Subjt: EVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIVLGKSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHRIMSQLSAP------
Query: --------------------------------------------------------------------------------------------GYPKDTRG
GYPK TRG
Subjt: --------------------------------------------------------------------------------------------GYPKDTRG
Query: GLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVVRQPECYMGLAETQV
G F DPKDN+V VSTNATFLEEDHIR+H PRSKIVLNE+ ST + A V SST + + Q L PR SGRV P YM L ET
Subjt: GLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVVRQPECYMGLAETQV
Query: VNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMV
V D D ED LT+ + M DVDKD+WIKAM+ E++SMYFN W+ DQPDG K IGCKWIYKRKRG DGKVQTF+ARLVAKG+T+VEGVDYE+TFSP+ M+
Subjt: VNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMV
Query: NSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVYKKIIDKTV
SIRI+L+I AY+DY+ EQK+C+L+RSIYGLKQASR WNI FD AIKSYGFDQ DEP VYK+II+K+V
Subjt: NSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVYKKIIDKTV
Query: AFLILYVDDILLIGN-------------------------------------------------------------------------------------
AFL+LYVDDILLI N
Subjt: AFLILYVDDILLIGN-------------------------------------------------------------------------------------
Query: ----------------------------------------ETDKYSRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTD
+TD+ SRKSTSGS F LNGG ++WR+IK GCIADSTMEAEY A CE KEAVWLRKF+ D
Subjt: ----------------------------------------ETDKYSRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTD
Query: LEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIREIVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
LEV+PNM PITL+C G VANS EP SHKRGKHIE KYHLIREIVHRGDV VTQ AS HNVADPFTKPL AKVFEGHLESLG R +P+
Subjt: LEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIREIVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
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| A0A5D3CPJ6 Gag/pol protein | 1.8e-252 | 41.86 | Show/hide |
Query: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
M+S+ +++LA +KL G+N+ +WKN INT+L+ DDL+FVL EEC Q+P++ A+++VR+ Y+RW +ANEKA+ YI+ASLSEVLAKKHE M+TA+EIM+SLQ+
Subjt: MSSSIIDLLAYNKLVGDNFQTWKNNINTILVTDDLKFVLTEECSQLPSSTASQSVRDAYDRWIRANEKAKVYIIASLSEVLAKKHELMITAKEIMESLQD
Query: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
MFGQ S+Q+KH +LK+++NARM EGASVREHVL+MM HFN+AEMNGA IDE+SQVSFILE+LP+SFLQFRSN VM KI YTLTTLLNELQ F+SLM+I+
Subjt: MFGQNSFQVKHGSLKHVFNARMKEGASVREHVLDMMTHFNLAEMNGASIDESSQVSFILETLPKSFLQFRSNVVMKKITYTLTTLLNELQNFQSLMRIRA
Query: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
+ E NVA R HRGSTSGTK + PS KK K+G KA+ A+A+ KK K A KG CFHCN + HW RNCPK+L+E+K
Subjt: PETEVNVA--YRSIHRGSTSGTKPVAPSYPKGKKKMMKRG----KADRASAQKDKKVKELAEKGKCFHCNGDDHWTRNCPKFLSERKN------------
Query: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Q I SW+ L GE+T+RVG+ +VS +A+ ++L +++LLL+N+Y+V
Subjt: -------------------------QEIDSWQPLREGEVTLRVGSEEIVSTVAIDKVKLYFDRNYLLLDNMYIV--------------------------
Query: ------------------------------------------------------------LG--------------------------------------
LG
Subjt: ------------------------------------------------------------LG--------------------------------------
Query: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
KSE LEKFKEYK EVEN L KTIKT RSDRGGEYMD +FQ+Y++E
Subjt: -----------------------------------------------------KSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHR
Query: IMSQLSAP--------------------------------------------------------------------------------------------
I+SQLSAP
Subjt: IMSQLSAP--------------------------------------------------------------------------------------------
Query: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
GYPK TRGG F DPKDN+V VSTNATFLEEDHIR+H PRSKIVLNE+ ST + A T V SST + + Q L PR SGRV
Subjt: ------GYPKDTRGGLFSDPKDNRVLVSTNATFLEEDHIRDHVPRSKIVLNEMD------STSARDANGASTSTSVVDSSTPSQVRSQELGMPRCSGRVV
Query: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
P YM L ET V D D ED LT+ + M DVDKD+WIKAM+ E+ESMYFN W+ DQPDG K IGCKWIYKRKRG DGKVQTFKARLVAKG+T+VE
Subjt: RQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVE
Query: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
GVDYEETFSP+ M+ SIRI+L+I AY+DY+ EQK+C+L+RSIYGLKQASR WNI FD AIKSYGFDQ
Subjt: GVDYEETFSPITMVNSIRIVLAIVAYYDYD--------------------------------EQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQND
Query: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
DEP VYK+II+K+VAFL+LYVDDILLIGN
Subjt: DEPYVYKKIIDKTVAFLILYVDDILLIGN-----------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------ETDKY
+TD+
Subjt: -----------------------------------------------------------------------------------------------ETDKY
Query: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
SRKSTSGS F LNGG V+WR+IK GCIADSTMEAEYVA CEA KEAVWLR F+ DLEV+PNM+ PITL+C GAVANS EP SHKRGKHIERKYHLIRE
Subjt: SRKSTSGSAFILNGGVVIWRNIKHGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIRE
Query: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
IVHRGDV VTQ AS HNVADPFTKPL AKVFEGHLESLG R +P+
Subjt: IVHRGDVTVTQRASEHNVADPFTKPLAAKVFEGHLESLGHRVLPY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.9e-28 | 22.11 | Show/hide |
Query: TYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMVNSIRIVLAIVA
++D+ DK W +A++ E+ + N W +P+ + + +W++ K G +KARLVA+GFT+ +DYEETF+P+ ++S R +L++V
Subjt: TYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMVNSIRIVLAIVA
Query: YYDY------------------------------DEQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVYKKIIDK----TVAFLILYVDD
Y+ + VC+L+++IYGLKQA+R W +F++A+K F + + +Y I+DK +++LYVDD
Subjt: YYDY------------------------------DEQKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVYKKIIDK----TVAFLILYVDD
Query: IL-------------------------------------------------------------------------------------------LIG----
++ LIG
Subjt: IL-------------------------------------------------------------------------------------------LIG----
Query: -------------NETDKYS----------------------------------------------------RKSTSGSAF-ILNGGVVIWRNIKHGCIA
N +YS RKST+G F + + ++ W + +A
Subjt: -------------NETDKYS----------------------------------------------------RKSTSGSAF-ILNGGVVIWRNIKHGCIA
Query: DSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIREIVHRGDVTVTQRASEHNVADPFTKPLAA
S+ EAEY+A EA +EA+WL+ +T + + + PI ++ +G ++ ++ P HKR KHI+ KYH RE V + + +E+ +AD FTKPL A
Subjt: DSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIREIVHRGDVTVTQRASEHNVADPFTKPLAA
Query: KVFEGHLESLG
F + LG
Subjt: KVFEGHLESLG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-34 | 20.96 | Show/hide |
Query: MYIVLGKSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHRIMSQLSAPG--------------------------------------
+YI+ K + + F+++ VE G+ +K LRSD GGEY EF++Y H I + + PG
Subjt: MYIVLGKSETLEKFKEYKTEVENLLGKTIKTLRSDRGGEYMDTEFQDYMIEHRIMSQLSAPG--------------------------------------
Query: -------------------------------------------YPKDTR--------------------GGLFSDPKDNRVLVSTNATFLEEDHIRDHVP
PK+ R G DP +V+ S + F E +R
Subjt: -------------------------------------------YPKDTR--------------------GGLFSDPKDNRVLVSTNATFLEEDHIRDHVP
Query: RSKIVLN-------EMDSTSARDANGASTSTSVVD-SSTPSQV------------------RSQELGMPRCSGRVVRQPECYMGLAETQVVNPDDDSEDL
S+ V N + STS + ST+ V + P +V + +E P R E +++ D + E L
Subjt: RSKIVLN-------EMDSTSARDANGASTSTSVVD-SSTPSQV------------------RSQELGMPRCSGRVVRQPECYMGLAETQVVNPDDDSEDL
Query: LTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMVNSIRIVLAIV
+ + +K++ +KAM +EMES+ N ++ + P G++ + CKW++K K+ D K+ +KARLV KGF + +G+D++E FSP+ + SIR +L++
Subjt: LTYDQTMVDVDKDKWIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMVNSIRIVLAIV
Query: AYYD---------------------YDEQ-----------KVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVY-KKIIDKTVAFLILYVDD
A D Y EQ VC+L++S+YGLKQA R W + FD +KS + + +P VY K+ + L+LYVDD
Subjt: AYYD---------------------YDEQ-----------KVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVY-KKIIDKTVAFLILYVDD
Query: ILLIGNE-------------------------------------------TDKY----------------------------------------------
+L++G + +KY
Subjt: ILLIGNE-------------------------------------------TDKY----------------------------------------------
Query: -----------------------------------------------------------------------------SRKSTSGSAFILNGGVVIWRNIK
+RKS++G F +GG + W++
Subjt: -----------------------------------------------------------------------------SRKSTSGSAFILNGGVVIWRNIK
Query: HGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIREIVHRGDVTVTQRASEHNVADPFT
C+A ST EAEY+A E KE +WL++F+ +L + ++C + A+ S H R KHI+ +YH IRE+V + V + ++ N AD T
Subjt: HGCIADSTMEAEYVATCEAPKEAVWLRKFMTDLEVLPNMNLPITLFCYYRGAVANSSEPWSHKRGKHIERKYHLIREIVHRGDVTVTQRASEHNVADPFT
Query: KPLAAKVFEGHLESLG
K + FE E +G
Subjt: KPLAAKVFEGHLESLG
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.9e-12 | 38.82 | Show/hide |
Query: WIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMVNSIRIVLAI
W +AM +E++++ N W P + +GCKW++K K DG + KARLVAKGF + EG+ + ET+SP+ +IR +L +
Subjt: WIKAMDQEMESMYFNCAWEHADQPDGEKSIGCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMVNSIRIVLAI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.9e-23 | 31.37 | Show/hide |
Query: QTMVDVDKD-KWIKAMDQEMESMYFNCAWEHADQPDGEKSI-GCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMVNSIRIVLAIV--
+T + KD +W AM E+ + N W+ P +I GC+WI+ +K DG + +KARLVAKG+ + G+DY ETFSP+ SIRIVL +
Subjt: QTMVDVDKD-KWIKAMDQEMESMYFNCAWEHADQPDGEKSI-GCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMVNSIRIVLAIV--
Query: -----------------------------AYYDYDEQK-VCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVYKKIIDKTVAFLILYVDDILL
+ D D VC+L +++YGLKQA R W + + + GF + + ++ K++ ++++YVDDIL+
Subjt: -----------------------------AYYDYDEQK-VCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVYKKIIDKTVAFLILYVDDILL
Query: IGNE
GN+
Subjt: IGNE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.2e-23 | 29.35 | Show/hide |
Query: HVPRSKIVLNEMDSTSARDANGASTSTSVVDSSTPS----QVRSQ----ELGMPRCSGRVVRQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKW
H+P ++E +S S+ +STST + P+ QV +Q M + +R+P A + N + T Q M D D+W
Subjt: HVPRSKIVLNEMDSTSARDANGASTSTSVVDSSTPS----QVRSQ----ELGMPRCSGRVVRQPECYMGLAETQVVNPDDDSEDLLTYDQTMVDVDKDKW
Query: IKAMDQEMESMYFNCAWEHADQPDGEKSI-GCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMVNSIRIVLAIV--------------
+AM E+ + N W+ P +I GC+WI+ +K DG + +KARLVAKG+ + G+DY ETFSP+ SIRIVL +
Subjt: IKAMDQEMESMYFNCAWEHADQPDGEKSI-GCKWIYKRKRGVDGKVQTFKARLVAKGFTEVEGVDYEETFSPITMVNSIRIVLAIV--------------
Query: -----------------AYYDYDE-QKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVYKKIIDKTVAFLILYVDDILLIGNET
+ D D VCRL ++IYGLKQA R W + + + GF + + ++ +++ ++++YVDDIL+ GN+T
Subjt: -----------------AYYDYDE-QKVCRLHRSIYGLKQASRYWNIMFDKAIKSYGFDQNDDEPYVYKKIIDKTVAFLILYVDDILLIGNET
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