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Tan0005101 (gene) of Snake gourd v1 genome

Gene IDTan0005101
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:11752792..11753795
RNA-Seq ExpressionTan0005101
SyntenyTan0005101
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045689.1 hypothetical protein E6C27_scaffold243G002050 [Cucumis melo var. makuwa]1.5e-4085.42Show/hide
Query:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW
        MTYCYGCKPRPSGPLPGPIL+LL VVFILI LSSLFPSEPIDFSEFQINWPLLAVPIIILVLVR LSS+DSS R+Y C C+RGWKM+CRCG   AW
Subjt:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW

KAG6571042.1 hypothetical protein SDJN03_29957, partial [Cucurbita argyrosperma subsp. sororia]8.1e-4287.5Show/hide
Query:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW
        MTYCYGCKPRPSGPLPGP+L+LL VVFILIGLSSLFPSEPIDFSEFQINWPLLAVPII+LVLVR LS+VDSSSR+Y C C+RGWKM CRC GRGAW
Subjt:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW

KAG6605007.1 hypothetical protein SDJN03_02324, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4091.67Show/hide
Query:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW
        MTYCYG KP PSGPLPGPILVLLTVVFILIGLSSLF SEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH  CACDRGWKMHCRC   GAW
Subjt:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW

KGN61893.1 hypothetical protein Csa_006600 [Cucumis sativus]1.4e-4186.46Show/hide
Query:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW
        MTYCYGCKPRPSGPLPGPIL+LL VVFILI LSSLFPSEPIDFSEFQINWPLLAVPIIILVLVR L+S+DSS R+Y C CDRGWKMHCRCG   AW
Subjt:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW

PKI78722.1 hypothetical protein CRG98_000947 [Punica granatum]5.7e-1146.74Show/hide
Query:  YCYGCK-PRPS-GPLPGPILVLLTVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYG-CACDRGWKMHCRC
        YCY CK P PS GP+P  +L+ L +  I I LS L   + + +  E  INW LLAVPI+IL +V +LSS+D   + YG   C R WK  C C
Subjt:  YCYGCK-PRPS-GPLPGPILVLLTVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYG-CACDRGWKMHCRC

TrEMBL top hitse value%identityAlignment
A0A0A0LJB6 Uncharacterized protein6.7e-4286.46Show/hide
Query:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW
        MTYCYGCKPRPSGPLPGPIL+LL VVFILI LSSLFPSEPIDFSEFQINWPLLAVPIIILVLVR L+S+DSS R+Y C CDRGWKMHCRCG   AW
Subjt:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW

A0A2I0LDH6 Uncharacterized protein2.8e-1146.74Show/hide
Query:  YCYGCK-PRPS-GPLPGPILVLLTVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYG-CACDRGWKMHCRC
        YCY CK P PS GP+P  +L+ L +  I I LS L   + + +  E  INW LLAVPI+IL +V +LSS+D   + YG   C R WK  C C
Subjt:  YCYGCK-PRPS-GPLPGPILVLLTVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYG-CACDRGWKMHCRC

A0A5D3BJW1 Uncharacterized protein7.4e-4185.42Show/hide
Query:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW
        MTYCYGCKPRPSGPLPGPIL+LL VVFILI LSSLFPSEPIDFSEFQINWPLLAVPIIILVLVR LSS+DSS R+Y C C+RGWKM+CRCG   AW
Subjt:  MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW

A0A6J1AFV4 uncharacterized protein LOC1104175862.0e-0640.7Show/hide
Query:  YCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSE-PIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDR--GWK
        YC  C+ RPS PLP  +L+ L +  +L+ LSSL   E  ++ +E  + W +L   + +LVLVR+LS +DS  R + C C R   WK
Subjt:  YCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSE-PIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDR--GWK

A0A6J1JLC4 uncharacterized protein LOC1114862537.8e-0651.67Show/hide
Query:  PLPGPILVLLTVVFILIGLSSLFPSE-PIDFSEFQINWPLLAVPIIILVLVRFLSSVDSS
        PLP P+L+LL VVFI +G S     E  ++ +E QINW L A P+++++L RFLSSVD S
Subjt:  PLPGPILVLLTVVFILIGLSSLFPSE-PIDFSEFQINWPLLAVPIIILVLVRFLSSVDSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein5.0e-0543.33Show/hide
Query:  PLPGPILVLLTVVFILIGLSSLFPS--EPIDFSEFQINWPLLAVPIIILVLVRFLSSVDS
        PLP P+L++L V  + + LSS + S  E  + +E QIN+ LL +P+ ++VLVR+LSS+++
Subjt:  PLPGPILVLLTVVFILIGLSSLFPS--EPIDFSEFQINWPLLAVPIIILVLVRFLSSVDS

AT2G21185.1 unknown protein2.6e-0637.5Show/hide
Query:  CYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSE-PIDFSEFQINWPLL-AVPIIILVLVRFLSSVDSSSRH-YGCACDRGWKMHC
        C  C+   S   P P++V++TV  +L+ LSS+   E  +   E  ++W LL AVP+ +L  VR LS +++S R  Y C C R W+  C
Subjt:  CYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSE-PIDFSEFQINWPLL-AVPIIILVLVRFLSSVDSSSRH-YGCACDRGWKMHC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTACTGCTATGGATGTAAACCTCGCCCTTCCGGTCCACTCCCCGGCCCTATCCTTGTCCTTCTCACCGTAGTCTTCATCTTGATCGGATTGTCCTCCCTGTTCCC
TTCCGAACCTATCGATTTCTCCGAATTCCAAATCAATTGGCCTCTCCTCGCCGTTCCGATTATTATACTTGTTCTCGTTCGCTTTTTGTCGTCCGTGGATTCTTCATCCA
GGCACTATGGCTGCGCTTGCGATCGCGGCTGGAAGATGCACTGTCGGTGCGGCGGCCGTGGCGCGTGGTAA
mRNA sequenceShow/hide mRNA sequence
TTAGGCGGTCCATTCACGGCATCAGTCTTCGCTATAAATACCACTGGCCTCTCTCTCTCTCTCTCTCTCAGTCTTTGTTATCTTCCATTTTCACACCTTCAATTTCCTCT
GTAAATCGCCATTGTTGACGTTTCGAAGATCCTGAAATGACCTACTGCTATGGATGTAAACCTCGCCCTTCCGGTCCACTCCCCGGCCCTATCCTTGTCCTTCTCACCGT
AGTCTTCATCTTGATCGGATTGTCCTCCCTGTTCCCTTCCGAACCTATCGATTTCTCCGAATTCCAAATCAATTGGCCTCTCCTCGCCGTTCCGATTATTATACTTGTTC
TCGTTCGCTTTTTGTCGTCCGTGGATTCTTCATCCAGGCACTATGGCTGCGCTTGCGATCGCGGCTGGAAGATGCACTGTCGGTGCGGCGGCCGTGGCGCGTGGTAACTT
AATTTAATTGAAATGCGTTTCATCTTCATACTTATCGTTGTTGCGTAAATTATTGTTCGGTGTTTATGTGATATACCTGTTTGGTTGTGGAAGTGCTGAAGGATTTTGAT
CGATTGTTGTGACGGTGATGTGAGGATTGAAGGTGTAAATGATGTGATGATGTGTTTGTTCTTAGATAACATGTGAAGCTGAAAGTTTAATTGAGTTATTTGATCGATTC
GTCTTGGTTTGTTTGTGGTTTAGGGATATGATTCGAACTCTGGACCTTGAACTTTCTGGTTTTAACTTTTAATCTGATTTTGAAAAATGATTAATAAAACAGAGTAAAAG
TTATAAATTTAGTTGGTGAAATGCTGATTTTTTTGAAATTTTGGATGATGTTTAATTTTTGATATAGAAAATATAACATTGGCAAAAATTGGCGTCGCCCGGACTCGAAC
CGGAGACCTTCAGTGTGTTAGACTGACGTGATAACCAACTACACCACGACACCCTGATGTTGGATTAAATTCCTATTATTTAATATATCATTTTTATGATTTGTCACATC
AACTCAGTTAAATT
Protein sequenceShow/hide protein sequence
MTYCYGCKPRPSGPLPGPILVLLTVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHYGCACDRGWKMHCRCGGRGAW