; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005110 (gene) of Snake gourd v1 genome

Gene IDTan0005110
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNucleic acid-binding, OB-fold-like protein
Genome locationLG02:96991373..96995634
RNA-Seq ExpressionTan0005110
SyntenyTan0005110
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142984.1 uncharacterized protein At4g28440 [Cucumis sativus]5.0e-6999.27Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

XP_022131585.1 uncharacterized protein At4g28440-like [Momordica charantia]5.5e-6897.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

XP_022951207.1 uncharacterized protein At4g28440-like [Cucurbita moschata]3.2e-6898.54Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

XP_022961781.1 uncharacterized protein At4g28440-like [Cucurbita moschata]9.4e-6897.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTL VKVVN KMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

XP_038883981.1 uncharacterized protein At4g28440 [Benincasa hispida]6.5e-6998.54Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTK+DQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

TrEMBL top hitse value%identityAlignment
A0A0A0LNA1 Uncharacterized protein2.4e-6999.27Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

A0A1S3BA24 uncharacterized protein At4g28440 isoform X12.4e-6999.27Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

A0A5A7V0K6 Nucleic acid-binding protein2.4e-6999.27Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

A0A6J1GH14 uncharacterized protein At4g28440-like1.6e-6898.54Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

A0A6J1KS21 uncharacterized protein At4g28440-like1.6e-6898.54Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVEE

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284401.5e-4467.42Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAV
        RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K RP    +R     RI ECL+GDETG I+FTARNDQVDLMK GAT+ LRN++IDMFKG+MRL V
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAV

Query:  DRWGRVEVTEPASFTVKEDNNLSLIEYELVNV
        D+WGR+E T  ASFTVKEDNNLSL+EYEL+NV
Subjt:  DRWGRVEVTEPASFTVKEDNNLSLIEYELVNV

Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein6.1e-5779.56Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ +TLRNAKIDM+KGSM
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM

Query:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV
        RLAVDRWGRVEV  EP   TVK+DNNLSLIEYELV+V
Subjt:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV

AT1G10590.2 Nucleic acid-binding, OB-fold-like protein6.1e-5779.56Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ +TLRNAKIDM+KGSM
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM

Query:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV
        RLAVDRWGRVEV  EP   TVK+DNNLSLIEYELV+V
Subjt:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein6.1e-5779.56Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ +TLRNAKIDM+KGSM
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM

Query:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV
        RLAVDRWGRVEV  EP   TVK+DNNLSLIEYELV+V
Subjt:  RLAVDRWGRVEVT-EPASFTVKEDNNLSLIEYELVNV

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein4.8e-6283.21Show/hide
Query:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMR
        MA+S K GL+KP FTKVDQLRPGTSGH + VK+V+TKMVLQKGR DGPQARQ+RI+EC+VGDETG+I+FTARNDQVDLMKEG+T+TLRNAKIDM+KGSMR
Subjt:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMR

Query:  LAVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVE
        LAVD+WGRVEVTEPASF VKED N+SLIEYELVNVVE
Subjt:  LAVDRWGRVEVTEPASFTVKEDNNLSLIEYELVNVVE

AT2G33845.1 Nucleic acid-binding, OB-fold-like protein3.2e-5075.38Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGR
        +KPVF KVDQL+PGTSGHTLTVKVV+   V QK G       R  RI+ECLVGDET  I+FTARNDQV+LMK GAT+ LRNAKIDMFKGSMRLAVD+WGR
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGR

Query:  VEVTEPASFTVKEDNNLSLIEYELVNVVEE
        +E TEPA  TVKEDNNLSL+EYELVNVVEE
Subjt:  VEVTEPASFTVKEDNNLSLIEYELVNVVEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAATCAAAACCTGGACTGAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCAGGCACTAGTGGGCATACTCTTACAGTCAAGGTTGTGAATACTAAGAT
GGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCTTGGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATC
AAGTGGACTTGATGAAAGAAGGTGCTACAATAACCCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTT
ACTGAGCCTGCCAGTTTTACTGTTAAGGAAGATAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTGGTGGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
CGACGGTTGTTATTTCATAGCAACTTTATTTCTTTCCTCGAAGCTAGAGTTTGACGGCTACGTTTCTCAAATCAGATCGGCTTCTCTTCCCTCTTCGTCTTTGCCTCTAC
CACTCGTAAAAGGTATTTGGGGAAATGGCAGAATCAAAACCTGGACTGAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCAGGCACTAGTGGGCATACTCTTAC
AGTCAAGGTTGTGAATACTAAGATGGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCTTGGTGGGTGATGAGACTGGAATGA
TCATATTTACTGCCAGAAATGATCAAGTGGACTTGATGAAAGAAGGTGCTACAATAACCCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGACTTGCTGTG
GACAGGTGGGGCCGAGTTGAAGTTACTGAGCCTGCCAGTTTTACTGTTAAGGAAGATAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTGGTGGAAGAGTGAAT
TTTGTGATCGTGTTCACTTTCCTGCTGCAACCTGACCATAAAATAAAACAGTCAAGCTACAAAATTACAAGTTTCCTTTGGGGTACCGAAAATGATCGCAGAGTTCATTA
TTAGGAAATAGAATTCTGGAAGCCAGTAGTACGGAAGTTGTTTTTCATCCCTGCAGCTTATTGTTGGAACCCTTGTTGGGATCTACAAACAGGTGGGTAATGGCTGCAGT
TGATGGGAGAAGGCTTAGCTGGCTTTTTGATTTTTCCTTTGTCTAGTATTTTATTGCTTATGAACACAGTTTATGATGTTCTTGAACTATCATCAGATGACAAGACTTGG
GCCTTGCTCCGTTAAAACTTATGCTTTTGGTGATTCAAGGTTCATGCCAACTTAACTGCTTTCGAGTTTCAAATCCAATGCTTATATGATTGATTAGCCCAAAAATTTGA
GCATTTCGTAAGCAACAGTTTAGGAAATAACGAACAATGGTTGTGGATCGTAGTCTAATTCAGGGGAAAAAAAGAAGATAAGTTGGCATTGTTTG
Protein sequenceShow/hide protein sequence
MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEV
TEPASFTVKEDNNLSLIEYELVNVVEE