; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005142 (gene) of Snake gourd v1 genome

Gene IDTan0005142
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTubby-like F-box protein
Genome locationLG01:106428070..106429105
RNA-Seq ExpressionTan0005142
SyntenyTan0005142
Gene Ontology termsNA
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607987.1 hypothetical protein SDJN03_01329, partial [Cucurbita argyrosperma subsp. sororia]2.4e-9191.58Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADVASAAGARLLI
        MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRRSH  HL DVAS AG RLLI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADVASAAGARLLI

Query:  VECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA
        VEC+PSDP EWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPV+FDEIVSTVIDFIVSN GSF APSAA
Subjt:  VECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA

KAG7037505.1 hypothetical protein SDJN02_01132, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-9691Show/hide
Query:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV
        M EEIE+RTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRRSH  HL DV
Subjt:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV

Query:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA
        AS AG RLLIVEC+PSDP EWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPV+FDEIVSTVIDFIVSN GSF APSAA
Subjt:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA

XP_022940745.1 uncharacterized protein LOC111446248 [Cucurbita moschata]4.9e-9792Show/hide
Query:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV
        M EEIE+RTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRRSH  HL DV
Subjt:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV

Query:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA
        AS AG RLLIVEC+PSDPAEWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPV+FDEIVSTVIDFIVSN GSFIAPSAA
Subjt:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA

XP_022981712.1 uncharacterized protein LOC111480776 [Cucurbita maxima]1.0e-9490.5Show/hide
Query:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV
        M EEIE+RTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRRSH  HL DV
Subjt:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV

Query:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA
        AS AG RLLIVEC+PSD AEWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPV+FDEIVSTVIDFIVSN GSF APSAA
Subjt:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA

XP_023523437.1 uncharacterized protein LOC111787650 [Cucurbita pepo subsp. pepo]1.0e-9490.5Show/hide
Query:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV
        M  +IE+RTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRRSH  HL DV
Subjt:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV

Query:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA
        ASAAG RLLIVEC+PSDPAEWRRRLESRGA+DR NWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSN GS  APSAA
Subjt:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA

TrEMBL top hitse value%identityAlignment
A0A0A0L485 Uncharacterized protein3.1e-8984.65Show/hide
Query:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV
        M EEIEER +M+IAMKGHPGTGKSTLAQ +ASLLK PLIDKDDVKDCAA ++AA TA+LVNDLSYDVVFRLASTQLRLGLSVVVDTPLS RSHL  LADV
Subjt:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV

Query:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA
        AS +GAR+LIVECRPSD  EWRRRLESRG +D+TNWHKPSTWR+IEMLLESYGGCTEFDVGDVPRLVVDTTAPV FDEIVSTV+DFIVSN GSF AP A 
Subjt:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA

Query:  ER
        +R
Subjt:  ER

A0A5A7SP11 Uncharacterized protein1.4e-8687.5Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADVASAAGARLLI
        M+IAMKGHPGTGKSTLAQ +ASLLKIPLIDKDDVKDCAA ++AA TA LVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHL  LADVAS +GAR+LI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADVASAAGARLLI

Query:  VECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAAER
        VECRPSD   WRRRLESRG +DRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPV FDEIVSTV+DFIVSN GSF AP  AER
Subjt:  VECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAAER

A0A6J1C0A8 uncharacterized protein LOC1110072988.2e-9087.69Show/hide
Query:  EIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADVASA
        EIEE+TKM+IAMKGHPGTGKST+AQ+LASLLKIPLIDKDDVKDCAAA+SAA +AAL+NDLSYDVVFRLASTQLRLGLSV++DTPLSRRSHLH L D+AS+
Subjt:  EIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADVASA

Query:  AGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPS
        AGARLLIVECRPSD AEWRRRLESRGA DRTNWHKPSTWREIEMLLE YGGCTEFDVGDVPRLVVDTTAPV+FDE VSTVIDFI SN  SF  PS
Subjt:  AGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPS

A0A6J1FRG5 uncharacterized protein LOC1114462482.4e-9792Show/hide
Query:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV
        M EEIE+RTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRRSH  HL DV
Subjt:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV

Query:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA
        AS AG RLLIVEC+PSDPAEWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPV+FDEIVSTVIDFIVSN GSFIAPSAA
Subjt:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA

A0A6J1IUR8 uncharacterized protein LOC1114807764.9e-9590.5Show/hide
Query:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV
        M EEIE+RTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAA++AA+TAALVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRRSH  HL DV
Subjt:  MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADV

Query:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA
        AS AG RLLIVEC+PSD AEWRRRLESRGA+DRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPV+FDEIVSTVIDFIVSN GSF APSAA
Subjt:  ASAAGARLLIVECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAGAAATTGAAGAGAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGTACAGGCAAAAGCACTTTGGCCCAAACCCTAGCCTCGCTCCTCAAAATTCC
TCTAATCGACAAAGACGACGTCAAGGACTGCGCCGCCGCGGTCTCCGCCGCAGCAACCGCCGCGCTCGTCAACGATCTTTCGTACGACGTCGTTTTCCGGCTCGCCTCGA
CGCAGCTCCGCCTCGGCCTCAGCGTCGTTGTCGACACGCCTCTCTCCCGGCGATCTCACCTCCACCACCTCGCCGACGTGGCATCCGCCGCCGGCGCGCGGCTTCTGATC
GTCGAGTGCAGGCCGTCCGATCCGGCGGAGTGGAGGCGGAGGCTCGAGAGCCGCGGCGCCAATGATCGGACGAACTGGCACAAGCCGTCGACGTGGCGAGAGATCGAGAT
GCTTCTGGAAAGTTACGGCGGATGTACGGAATTCGACGTCGGAGATGTGCCGAGGCTGGTGGTCGACACGACGGCGCCGGTTAATTTCGACGAGATTGTTTCTACGGTGA
TCGATTTTATTGTATCTAATCGTGGTTCTTTCATTGCTCCGTCGGCCGCGGAAAGATGA
mRNA sequenceShow/hide mRNA sequence
CACCCAATTACTGCCCATAACTATTTTATGTAAATTTGAGATACTCTTTCTCTTTTATTTAAAATGTGAAAAATGGCATAATGGCCACACCAAATAACTCAACAAGTTCA
CTGTAGAAGAACCTATTCCACTATAAAAATATCCAAACACTCAATTAAATATCTTTTTGCAATTCTCAAAAAGCTGATGAGGATAATAAAATCACCATCGTCCACAAGAG
AAAAATAAATAAATAAAACAAAACTTTTTTTTGTTTGAAAAGATAAAACAAGACTTGGAAAAAAAAAAGGTCAGAAATGAAATCAAATCAGAAAAATGGCAGAAGAAATT
GAAGAGAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGTACAGGCAAAAGCACTTTGGCCCAAACCCTAGCCTCGCTCCTCAAAATTCCTCTAATCGACAAAGA
CGACGTCAAGGACTGCGCCGCCGCGGTCTCCGCCGCAGCAACCGCCGCGCTCGTCAACGATCTTTCGTACGACGTCGTTTTCCGGCTCGCCTCGACGCAGCTCCGCCTCG
GCCTCAGCGTCGTTGTCGACACGCCTCTCTCCCGGCGATCTCACCTCCACCACCTCGCCGACGTGGCATCCGCCGCCGGCGCGCGGCTTCTGATCGTCGAGTGCAGGCCG
TCCGATCCGGCGGAGTGGAGGCGGAGGCTCGAGAGCCGCGGCGCCAATGATCGGACGAACTGGCACAAGCCGTCGACGTGGCGAGAGATCGAGATGCTTCTGGAAAGTTA
CGGCGGATGTACGGAATTCGACGTCGGAGATGTGCCGAGGCTGGTGGTCGACACGACGGCGCCGGTTAATTTCGACGAGATTGTTTCTACGGTGATCGATTTTATTGTAT
CTAATCGTGGTTCTTTCATTGCTCCGTCGGCCGCGGAAAGATGAAGCGATATTATTCGGTTAAATTGTAATATATATTTATGTACAGTTACACTTACCTCTGACATTTTG
TTATGTAATTTATAAGGTCGTTAATACATTATGGGTTTGGTGGACA
Protein sequenceShow/hide protein sequence
MAEEIEERTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAAVSAAATAALVNDLSYDVVFRLASTQLRLGLSVVVDTPLSRRSHLHHLADVASAAGARLLI
VECRPSDPAEWRRRLESRGANDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVNFDEIVSTVIDFIVSNRGSFIAPSAAER