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Tan0005146 (gene) of Snake gourd v1 genome

Gene IDTan0005146
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag-pro-like protein
Genome locationLG06:70142106..70143858
RNA-Seq ExpressionTan0005146
SyntenyTan0005146
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046607.1 Gag-pro-like protein [Cucumis melo var. makuwa]7.8e-1851.4Show/hide
Query:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM
        MD+Q N+QVQ VR +VE LK+Q+AKILELLT  + KSVAGTS Q E   NQ L+D P YPPGFTP    +P M ++ YPTSFP  +P   + +     H 
Subjt:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM

Query:  TSPTQRP
         +P   P
Subjt:  TSPTQRP

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]3.9e-1753.4Show/hide
Query:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM
        MD+Q N+QVQ VR +VE LK+Q+AKILELLT  + KSVAGTS Q E   NQ L+D P YPPGFTP    +P M +  YPTSFP  +P   + +   V H 
Subjt:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM

Query:  TSP
         +P
Subjt:  TSP

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]1.1e-1134.84Show/hide
Query:  PFYPPGFTPPMVLNPHMAEVAYPTS--FPVQDPGRVSS-------RPRVVTHMTSPTQRPASYNRSPQLGGQKCY----KDKVQNLNTSMKTLFQILCDV
        P YP  + P      H   V + T   FP++   +V S       R +         Q P   +  P +     +    K+KV ++ TSMKTLFQIL   
Subjt:  PFYPPGFTPPMVLNPHMAEVAYPTS--FPVQDPGRVSS-------RPRVVTHMTSPTQRPASYNRSPQLGGQKCY----KDKVQNLNTSMKTLFQILCDV

Query:  GYLSIRSEQSSIDDLGLHNENICLFHKGMVGHSVEDCDDFKQHVQKLLDSKLLIV
        GYLS R      + +G  N   CLFH     HS+EDC +FK  VQKL+DSK+L++
Subjt:  GYLSIRSEQSSIDDLGLHNENICLFHKGMVGHSVEDCDDFKQHVQKLLDSKLLIV

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]3.3e-1651.46Show/hide
Query:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM
        MD+Q N+QVQ VR +VE LK+Q+AKILELLT  + KSV GTS Q E   NQ L+D P YPPGFTP    +P M +  YPTSFP  +P   + +     H 
Subjt:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM

Query:  TSP
         +P
Subjt:  TSP

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]1.9e-1134.84Show/hide
Query:  PFYPPGFTPPMVLNPHMAEVAYPTS--FPVQDPGRVSS-------RPRVVTHMTSPTQRPASYNRSPQLGG----QKCYKDKVQNLNTSMKTLFQILCDV
        P YP  + P      H   V + T   FP++   +V S       R +         Q P   +  P +       + +K+KV ++ TSMKTLFQIL   
Subjt:  PFYPPGFTPPMVLNPHMAEVAYPTS--FPVQDPGRVSS-------RPRVVTHMTSPTQRPASYNRSPQLGG----QKCYKDKVQNLNTSMKTLFQILCDV

Query:  GYLSIRSEQSSIDDLGLHNENICLFHKGMVGHSVEDCDDFKQHVQKLLDSKLLIV
        GYLS R      + +G  N   CLFH     HS+EDC +FK  VQKL+DSK+L++
Subjt:  GYLSIRSEQSSIDDLGLHNENICLFHKGMVGHSVEDCDDFKQHVQKLLDSKLLIV

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]3.6e-1545.83Show/hide
Query:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM
        MD+Q N+QVQ VR +VE LK+Q+AKILELLT  + KSVAGTS Q E   NQ L+D   YPP FTP    +P M +  YPTSFP  +P   + +   V+ +
Subjt:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM

Query:  TSPTQRPASYNRSPQLGGQK
         S     +    S + G +K
Subjt:  TSPTQRPASYNRSPQLGGQK

TYK15864.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.7e-1557.47Show/hide
Query:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDP
        MD+Q N+QVQ V  +VE LK+Q+AKILELLT  + KSVAG S Q E   NQ L+D P YPPGF P    +P M +  YPTSFP Q+P
Subjt:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDP

TrEMBL top hitse value%identityAlignment
A0A1S3BTL0 uncharacterized protein LOC1034934071.8e-1545.83Show/hide
Query:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM
        MD+Q N+QVQ VR +VE LK+Q+AKILELLT  + KSVAGTS Q E   NQ L+D   YPP FTP    +P M +  YPTSFP  +P   + +   V+ +
Subjt:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM

Query:  TSPTQRPASYNRSPQLGGQK
         S     +    S + G +K
Subjt:  TSPTQRPASYNRSPQLGGQK

A0A5A7TXF2 Gag-pro-like protein3.8e-1851.4Show/hide
Query:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM
        MD+Q N+QVQ VR +VE LK+Q+AKILELLT  + KSVAGTS Q E   NQ L+D P YPPGFTP    +P M ++ YPTSFP  +P   + +     H 
Subjt:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM

Query:  TSPTQRP
         +P   P
Subjt:  TSPTQRP

A0A5A7V681 Retrotrans_gag domain-containing protein1.9e-1753.4Show/hide
Query:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM
        MD+Q N+QVQ VR +VE LK+Q+AKILELLT  + KSVAGTS Q E   NQ L+D P YPPGFTP    +P M +  YPTSFP  +P   + +   V H 
Subjt:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM

Query:  TSP
         +P
Subjt:  TSP

A0A5A7V681 Retrotrans_gag domain-containing protein5.3e-1234.84Show/hide
Query:  PFYPPGFTPPMVLNPHMAEVAYPTS--FPVQDPGRVSS-------RPRVVTHMTSPTQRPASYNRSPQLGGQKCY----KDKVQNLNTSMKTLFQILCDV
        P YP  + P      H   V + T   FP++   +V S       R +         Q P   +  P +     +    K+KV ++ TSMKTLFQIL   
Subjt:  PFYPPGFTPPMVLNPHMAEVAYPTS--FPVQDPGRVSS-------RPRVVTHMTSPTQRPASYNRSPQLGGQKCY----KDKVQNLNTSMKTLFQILCDV

Query:  GYLSIRSEQSSIDDLGLHNENICLFHKGMVGHSVEDCDDFKQHVQKLLDSKLLIV
        GYLS R      + +G  N   CLFH     HS+EDC +FK  VQKL+DSK+L++
Subjt:  GYLSIRSEQSSIDDLGLHNENICLFHKGMVGHSVEDCDDFKQHVQKLLDSKLLIV

A0A5A7V681 Retrotrans_gag domain-containing protein1.6e-1651.46Show/hide
Query:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM
        MD+Q N+QVQ VR +VE LK+Q+AKILELLT  + KSV GTS Q E   NQ L+D P YPPGFTP    +P M +  YPTSFP  +P   + +     H 
Subjt:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM

Query:  TSP
         +P
Subjt:  TSP

A0A5A7VAU5 Uncharacterized protein9.0e-1234.84Show/hide
Query:  PFYPPGFTPPMVLNPHMAEVAYPTS--FPVQDPGRVSS-------RPRVVTHMTSPTQRPASYNRSPQLGG----QKCYKDKVQNLNTSMKTLFQILCDV
        P YP  + P      H   V + T   FP++   +V S       R +         Q P   +  P +       + +K+KV ++ TSMKTLFQIL   
Subjt:  PFYPPGFTPPMVLNPHMAEVAYPTS--FPVQDPGRVSS-------RPRVVTHMTSPTQRPASYNRSPQLGG----QKCYKDKVQNLNTSMKTLFQILCDV

Query:  GYLSIRSEQSSIDDLGLHNENICLFHKGMVGHSVEDCDDFKQHVQKLLDSKLLIV
        GYLS R      + +G  N   CLFH     HS+EDC +FK  VQKL+DSK+L++
Subjt:  GYLSIRSEQSSIDDLGLHNENICLFHKGMVGHSVEDCDDFKQHVQKLLDSKLLIV

A0A5A7VAU5 Uncharacterized protein1.8e-1545.83Show/hide
Query:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM
        MD+Q N+QVQ VR +VE LK+Q+AKILELLT  + KSVAGTS Q E   NQ L+D   YPP FTP    +P M +  YPTSFP  +P   + +   V+ +
Subjt:  MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHM

Query:  TSPTQRPASYNRSPQLGGQK
         S     +    S + G +K
Subjt:  TSPTQRPASYNRSPQLGGQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCAAGTGAACGAGCAGGTACAAACAGTCCGCCTAGAGGTGGAAGAATTGAAAGAGCAAGTAGCAAAGATCTTGGAGCTTCTTACCGCAAGAAAAGAAAAGTC
TGTAGCAGGAACGTCGTTGCAAGCTGAGACAGGTCAAAACCAAGGGCTAGATGACACTCCTTTTTACCCTCCAGGGTTTACGCCGCCAATGGTGTTAAACCCACACATGG
CTGAGGTAGCTTATCCAACCTCTTTTCCTGTGCAAGATCCCGGTCGAGTAAGCTCAAGACCAAGAGTTGTGACCCATATGACTTCACCAACTCAAAGACCTGCGAGTTAT
AACCGTAGTCCTCAACTTGGAGGACAAAAATGCTATAAAGATAAAGTCCAAAATTTGAATACATCTATGAAGACTCTCTTTCAAATTCTCTGCGATGTCGGATATCTTTC
GATAAGGTCTGAGCAGAGTAGCATAGATGATTTGGGCTTGCATAACGAGAATATATGCCTTTTTCATAAAGGAATGGTCGGACATTCCGTAGAAGATTGTGATGATTTTA
AGCAGCATGTGCAAAAACTATTAGATTCAAAGTTATTGATTGTGAGCGATAACTACGGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCAAGTGAACGAGCAGGTACAAACAGTCCGCCTAGAGGTGGAAGAATTGAAAGAGCAAGTAGCAAAGATCTTGGAGCTTCTTACCGCAAGAAAAGAAAAGTC
TGTAGCAGGAACGTCGTTGCAAGCTGAGACAGGTCAAAACCAAGGGCTAGATGACACTCCTTTTTACCCTCCAGGGTTTACGCCGCCAATGGTGTTAAACCCACACATGG
CTGAGGTAGCTTATCCAACCTCTTTTCCTGTGCAAGATCCCGGTCGAGTAAGCTCAAGACCAAGAGTTGTGACCCATATGACTTCACCAACTCAAAGACCTGCGAGTTAT
AACCGTAGTCCTCAACTTGGAGGACAAAAATGCTATAAAGATAAAGTCCAAAATTTGAATACATCTATGAAGACTCTCTTTCAAATTCTCTGCGATGTCGGATATCTTTC
GATAAGGTCTGAGCAGAGTAGCATAGATGATTTGGGCTTGCATAACGAGAATATATGCCTTTTTCATAAAGGAATGGTCGGACATTCCGTAGAAGATTGTGATGATTTTA
AGCAGCATGTGCAAAAACTATTAGATTCAAAGTTATTGATTGTGAGCGATAACTACGGGAGATGA
Protein sequenceShow/hide protein sequence
MDDQVNEQVQTVRLEVEELKEQVAKILELLTARKEKSVAGTSLQAETGQNQGLDDTPFYPPGFTPPMVLNPHMAEVAYPTSFPVQDPGRVSSRPRVVTHMTSPTQRPASY
NRSPQLGGQKCYKDKVQNLNTSMKTLFQILCDVGYLSIRSEQSSIDDLGLHNENICLFHKGMVGHSVEDCDDFKQHVQKLLDSKLLIVSDNYGR