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Tan0005170 (gene) of Snake gourd v1 genome

Gene IDTan0005170
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane protein
Genome locationLG02:96115830..96116976
RNA-Seq ExpressionTan0005170
SyntenyTan0005170
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3446149.1 hypothetical protein FNV43_RR11328 [Rhamnella rubrinervis]8.0e-1282.61Show/hide
Query:  QRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
        Q+SS  PW+LE VPFI+VLLIAAHVFALVYWIYRLAT+KQP RRKA
Subjt:  QRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
KAF3962817.1 hypothetical protein CMV_012716 [Castanea mollissima]2.1e-1278.43Show/hide
Query:  MTNEQRS-SPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
        M NEQ S SP PW+L+AVPF++VLLIAAHV ALVYWIYRLAT+KQP RRKA
Subjt:  MTNEQRS-SPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
KAG7020426.1 hypothetical protein SDJN02_17110 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-1483.67Show/hide
Query:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRK
        M NEQRSS GPW LEA+P ++VLLIAAHVFALVYWIYRLATQKQPPR K
Subjt:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRK
KAG7029467.1 hypothetical protein SDJN02_07806 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-1584Show/hide
Query:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
        M NE+RSS GPW+LEA+PFI+VLLIAAHVFALVYWIY+LA QKQPPRRKA
Subjt:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
PON94578.1 Transmembrane protein [Trema orientale]4.7e-1276Show/hide
Query:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
        M NEQ S   PW+L+AVP ++VLLIAAHVFALVYWIYRLAT+KQP RRKA
Subjt:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
TrEMBL top hitse value%identityAlignment
A0A059CW86 Uncharacterized protein (Fragment)1.6e-1070Show/hide
Query:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
        M N+Q  S  PW+++A P+++VLLIAAHVFALVYWIYRLAT+KQP RRKA
Subjt:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
A0A2N9FKX1 Uncharacterized protein7.3e-1172.55Show/hide
Query:  MTNEQRSSP-GPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
        M NEQ+SS   PW L+ VP ++V+LIAAHVFALVYWIYRLAT+KQP RRKA
Subjt:  MTNEQRSSP-GPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
A0A2P5DIT2 Transmembrane protein8.6e-1274Show/hide
Query:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
        M NEQ S   PW+L+ VP I+VLLIA HVFALVYWIYRLAT+KQP RRKA
Subjt:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
A0A2P5F9W8 Transmembrane protein2.3e-1276Show/hide
Query:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
        M NEQ S   PW+L+AVP ++VLLIAAHVFALVYWIYRLAT+KQP RRKA
Subjt:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKA
A0A2P6PY50 Uncharacterized protein2.1e-1073.08Show/hide
Query:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLAT--QKQPPRRKA
        M N+Q  S  PW LEAVPFI++LLIAAHV ALVYWIYRLAT  +KQP RRKA
Subjt:  MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLAT--QKQPPRRKA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G10745.1 unknown protein1.8e-0664.71Show/hide
Query:  PWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQ
        PW L+ VP ++VLL AAHV AL YWIYRLAT ++
Subjt:  PWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQ
AT5G24980.1 unknown protein3.4e-0555.56Show/hide
Query:  LEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRK
        ++ VP ++V L A HV ALVYWIYRLA+ + P R+K
Subjt:  LEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACGAGCAGCGGTCATCGCCAGGGCCCTGGATGCTCGAAGCAGTACCCTTCATTCTCGTTCTTCTCATAGCAGCACACGTCTTCGCTTTGGTTTACTGGATTTA
TAGGTTAGCGACCCAAAAACAACCTCCCAGGAGGAAGGCACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACGAGCAGCGGTCATCGCCAGGGCCCTGGATGCTCGAAGCAGTACCCTTCATTCTCGTTCTTCTCATAGCAGCACACGTCTTCGCTTTGGTTTACTGGATTTA
TAGGTTAGCGACCCAAAAACAACCTCCCAGGAGGAAGGCACTCTGAGTTACTGTGAAGAATCACCAGGTCAAGAAATGATTCAAGACATTTTATTCTGAAATCCATTAGT
GAAGAGTCTGTTTTACGGGAACATATAAATATAAACTACAGCTTTTGCTATTGAATTATTTTAAGAAAGAGAAAAAAACAGTTGGGAACAAATGTCCTTGCTCCTGGTTT
CTCATGAAGAGTGGCCGGTTCTGCTCCTTGTAC
Protein sequenceShow/hide protein sequence
MTNEQRSSPGPWMLEAVPFILVLLIAAHVFALVYWIYRLATQKQPPRRKAL