; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005187 (gene) of Snake gourd v1 genome

Gene IDTan0005187
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG02:14312984..14315037
RNA-Seq ExpressionTan0005187
SyntenyTan0005187
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588707.1 hypothetical protein SDJN03_17272, partial [Cucurbita argyrosperma subsp. sororia]7.2e-3978.9Show/hide
Query:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDT----D
        MARTSVQANAL  RK+KQLRRQFSSL   S  K ETETEPL YNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS + WFRD D VDDLNPD      
Subjt:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDT----D

Query:  PRFAAVFGA
        PR AAV GA
Subjt:  PRFAAVFGA

XP_022148740.1 uncharacterized protein LOC111017332 [Momordica charantia]1.2e-3873.5Show/hide
Query:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGET------ETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPD
        MAR +V+ANA+ LR+MKQLRRQFSS  MES AK E       ETEP PYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSR+CWFRDSD VDD NPD
Subjt:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGET------ETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPD

Query:  TD----PRFAAVFGARN
         +    PRFAA FG ++
Subjt:  TD----PRFAAVFGARN

XP_022989019.1 uncharacterized protein LOC111486209 [Cucurbita maxima]1.9e-3979.82Show/hide
Query:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDT----D
        MARTSVQANAL  RK+KQLRRQFSSL   S  K ETETEPL YNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS + WFRD D VDDLNPDT     
Subjt:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDT----D

Query:  PRFAAVFGA
        PR AAV GA
Subjt:  PRFAAVFGA

XP_023531513.1 uncharacterized protein LOC111793725 [Cucurbita pepo subsp. pepo]5.5e-3979.63Show/hide
Query:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDT----D
        MARTSVQANAL  RK+KQLRRQFSSL   S  K ETETEPL YNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS + WFRD D VDDLNPDT     
Subjt:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDT----D

Query:  PRFAAVFG
        PR AAV G
Subjt:  PRFAAVFG

XP_038887565.1 uncharacterized protein LOC120077680 [Benincasa hispida]9.4e-3972.5Show/hide
Query:  MART--SVQANALFLRKMKQLRRQFSSLVMESTA-------KGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDL
        MART  +VQANALFLRKM+QLRRQFSS V+ES         + ETETE L YNSSTWVPHPRTGIYFPQGHEWVMKD+PENAASFS+LCWFRDSD +DDL
Subjt:  MART--SVQANALFLRKMKQLRRQFSSLVMESTA-------KGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDL

Query:  NPDTD----PRFAAVFGARN
        N D D    PRFA VF  R+
Subjt:  NPDTD----PRFAAVFGARN

TrEMBL top hitse value%identityAlignment
A0A0A0K7S0 Uncharacterized protein1.4e-3576.53Show/hide
Query:  VQANALFLRKMKQLRRQFSSLVMESTAK-------GETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDTD
        +QAN LFLRKMKQL+ QF  LV++ST++        ETETE LPYNSSTWVPHPRTGIYFPQGHEWVMKD+PENAASF RLCWFRDSD+VDDLNPD D
Subjt:  VQANALFLRKMKQLRRQFSSLVMESTAK-------GETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDTD

A0A1S3C0N8 uncharacterized protein LOC1034952982.3e-3573.33Show/hide
Query:  MARTSV--QANALFLRKMKQLRRQFSSLVMESTAK-------GETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDL
        M+RT +  QAN LFLRKMKQL+RQF SLV++ST++        ETET+ LPYNSSTWVPHPRTGIYFPQGHEWVMKD+PENAASFSRLCWFRDSD+VDDL
Subjt:  MARTSV--QANALFLRKMKQLRRQFSSLVMESTAK-------GETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDL

Query:  NPDTD
        N + +
Subjt:  NPDTD

A0A6J1D3R9 uncharacterized protein LOC1110173325.9e-3973.5Show/hide
Query:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGET------ETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPD
        MAR +V+ANA+ LR+MKQLRRQFSS  MES AK E       ETEP PYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSR+CWFRDSD VDD NPD
Subjt:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGET------ETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPD

Query:  TD----PRFAAVFGARN
         +    PRFAA FG ++
Subjt:  TD----PRFAAVFGARN

A0A6J1EIT6 uncharacterized protein LOC1114346651.3e-3877.98Show/hide
Query:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDT----D
        MARTSVQANAL  R +KQLRRQFSSL   S  K ETETEPL YNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS + WFRD D VDDLNPD      
Subjt:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDT----D

Query:  PRFAAVFGA
        PR AAV GA
Subjt:  PRFAAVFGA

A0A6J1JN70 uncharacterized protein LOC1114862099.2e-4079.82Show/hide
Query:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDT----D
        MARTSVQANAL  RK+KQLRRQFSSL   S  K ETETEPL YNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS + WFRD D VDDLNPDT     
Subjt:  MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDT----D

Query:  PRFAAVFGA
        PR AAV GA
Subjt:  PRFAAVFGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73120.1 unknown protein9.5e-0565.38Show/hide
Query:  SSTWVPHPRTGIYFPQGHEWVMKDVP
        +S+WVPH  TGIY+P+G E VM+DVP
Subjt:  SSTWVPHPRTGIYFPQGHEWVMKDVP

AT3G19550.1 unknown protein1.4e-1141.35Show/hide
Query:  MARTSV-QANALFLRKMKQL--RRQFSSLVMESTAKGETETEPLPYNS-------STWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDD
        M RT + +A  L LR  KQ   R   SS   +S        E +  ++        +WVPHPRTGI+FP G E VM+DVP  AASF    W R+ D VD 
Subjt:  MARTSV-QANALFLRKMKQL--RRQFSSLVMESTAKGETETEPLPYNS-------STWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDD

Query:  LNPD
         +PD
Subjt:  LNPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGACTTCTGTGCAGGCAAATGCATTATTTTTAAGGAAAATGAAGCAATTGAGGCGCCAATTCAGCAGCCTTGTAATGGAGTCCACAGCCAAAGGCGAGACAGA
AACAGAGCCACTGCCCTACAATTCTTCCACTTGGGTGCCCCATCCTCGCACTGGAATCTACTTCCCTCAGGGCCATGAGTGGGTCATGAAGGACGTCCCTGAAAATGCAG
CTTCCTTCTCTCGACTTTGCTGGTTCCGGGATTCCGACAACGTCGACGACCTCAACCCCGACACCGATCCTCGGTTCGCTGCTGTTTTCGGTGCCCGGAATTGA
mRNA sequenceShow/hide mRNA sequence
AGAAGTTGTTTGGCTTTGGATTTTCTTGGAAAATTCATTCTTAGAAAGCTGTTTGGCTTTGGATTTTCCTGGAAAGTTGGGTTGATTTTCTTTTGTGAGAAAGTGGTTGT
GTGTTTGTTTGTATGGCAAGGACTTCTGTGCAGGCAAATGCATTATTTTTAAGGAAAATGAAGCAATTGAGGCGCCAATTCAGCAGCCTTGTAATGGAGTCCACAGCCAA
AGGCGAGACAGAAACAGAGCCACTGCCCTACAATTCTTCCACTTGGGTGCCCCATCCTCGCACTGGAATCTACTTCCCTCAGGGCCATGAGTGGGTCATGAAGGACGTCC
CTGAAAATGCAGCTTCCTTCTCTCGACTTTGCTGGTTCCGGGATTCCGACAACGTCGACGACCTCAACCCCGACACCGATCCTCGGTTCGCTGCTGTTTTCGGTGCCCGG
AATTGACACAGCTTGGAGAAGAAGGTTGTCCCAACTAACACAATGTGTTCAAGAGATCACACTTGAGAGTTGAAGTTGAAGTTGGATAATAACCAAATTGAGAATAATTG
AAGTATGATGGTGTAATCATCACCCACATTGGGATAGATTGTAAATAATATAGCATAATAAATTGAAGAAACATGAATCTATCCAAAATAATAAATTTATAGTAATTGAA
GTCTATTAATAATTCAAACACATAATATAACAATAAATTATGGGTGTTAATTAAGTCACATATTCATGTTCCTATCCTATACTAATTTAATA
Protein sequenceShow/hide protein sequence
MARTSVQANALFLRKMKQLRRQFSSLVMESTAKGETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDNVDDLNPDTDPRFAAVFGARN