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Tan0005195 (gene) of Snake gourd v1 genome

Gene IDTan0005195
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG06:25811796..25812293
RNA-Seq ExpressionTan0005195
SyntenyTan0005195
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN60662.1 hypothetical protein VITISV_007186 [Vitis vinifera]5.6e-0630.86Show/hide
Query:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCY-SCINVLSKDQKLLLKLLDKVPDEHIRETILKQLR
        N L++ +D K  L  +M   SDS + ++S N+D +   + S   SS      D+  +G   CNC    INV+S+DQ+ +L  L KV DE  ++ + +  +
Subjt:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCY-SCINVLSKDQKLLLKLLDKVPDEHIRETILKQLR

Query:  NSLKKEVKEEKKKRTTDILDITPITINDVLRKISIK--REVSVQDLQFEINNLKEEVSNLRR
         S+   VK E KK       + P  +ND+L +   +  ++VS+++L  E+   K+E+  LR+
Subjt:  NSLKKEVKEEKKKRTTDILDITPITINDVLRKISIK--REVSVQDLQFEINNLKEEVSNLRR

CAN66651.1 hypothetical protein VITISV_043264 [Vitis vinifera]2.5e-0631.48Show/hide
Query:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNC-YSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLR
        N L++ +D K  L  +M   SDS + ++S N+D +   + S   SS      D+  +G   CNC    INV+S+DQ+ +L  L KV DE  ++ + +  +
Subjt:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNC-YSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLR

Query:  NSLKKEVKEEKKKRTTDILDITPITINDVLRKISIK--REVSVQDLQFEINNLKEEVSNLRR
         S+   VK E KK       + P  +ND+L +   +  +EVS+++L  E+   K+E+  LR+
Subjt:  NSLKKEVKEEKKKRTTDILDITPITINDVLRKISIK--REVSVQDLQFEINNLKEEVSNLRR

CAN77376.1 hypothetical protein VITISV_024782 [Vitis vinifera]2.5e-0630.86Show/hide
Query:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCY-SCINVLSKDQKLLLKLLDKVPDEHIRETILKQLR
        N L++ +D K  L  +M   SDS + ++S N+D +   + S   SS      D+  +G   CNC    INV+S+DQ+ +L  L KV DE  ++ + +  +
Subjt:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCY-SCINVLSKDQKLLLKLLDKVPDEHIRETILKQLR

Query:  NSLKKEVKEEKKKRTTDILDITPITINDVLRKISIK--REVSVQDLQFEINNLKEEVSNLRR
         S+   VK E KK       + P  +ND+L +   +  ++VS+++L  E+ + K+E+  LR+
Subjt:  NSLKKEVKEEKKKRTTDILDITPITINDVLRKISIK--REVSVQDLQFEINNLKEEVSNLRR

KAF5803680.1 putative transcription factor interactor and regulator CCHC(Zn) family [Helianthus annuus]3.5e-0828.14Show/hide
Query:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLRN
        NELNI ++ K+++  ++ + + S N+    +D+ L   E+S++ SS E  M   EC G  +C     IN L+++ K L +LL+K+ D+ +++  LKQL+ 
Subjt:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLRN

Query:  SLKKEVKEEKKKRTTDILDITPITINDVLRKISIKR----EVSVQDLQFEINNLKEEVSNLRREFRK
          K  +++E+K              N++ ++   K+     V++ DLQ E+ N+KEE+  ++ + ++
Subjt:  SLKKEVKEEKKKRTTDILDITPITINDVLRKISIKR----EVSVQDLQFEINNLKEEVSNLRREFRK

XP_022933039.1 uncharacterized protein LOC111439730 [Cucurbita moschata]3.1e-0942.34Show/hide
Query:  NELNIDEDCKKELLMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLRNSL
        NEL+ID++ K +LL    +DS   SE    ++LEL+EESD+YSS E   Y+ E +G R C    CINVL+KDQ++LL++++KV D  I++ I ++LR+++
Subjt:  NELNIDEDCKKELLMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLRNSL

Query:  KKEVKEEKKKR
              E+++R
Subjt:  KKEVKEEKKKR

TrEMBL top hitse value%identityAlignment
A0A151SFY4 Enzymatic polyprotein2.7e-0630.49Show/hide
Query:  EGSNELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQ
        E  N LN+ E+ K+++  L+ + S+S     S+        E  D   +   E  + EC+    C+C   INV++ + KL+L++++K+P+E   E  L+ 
Subjt:  EGSNELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQ

Query:  LRNSLKKEVKEEKKKRTTDILDITPITINDVLRKISIK-REVSVQDLQFEINNLKEEVSNLRRE
        L + LK  + E+K    +  L+ +    + +L+K SIK + V+++DLQ EIN LKEE++ ++ +
Subjt:  LRNSLKKEVKEEKKKRTTDILDITPITINDVLRKISIK-REVSVQDLQFEINNLKEEVSNLRRE

A0A251VET5 Putative reverse transcriptase domain, Zinc finger, CCHC-type, Aspartic peptidase domain protein3.8e-0828.14Show/hide
Query:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLRN
        NELNI ++ K+++  ++ + + S N     +D+ L   E+S++ SS E  M   EC G  +C     IN L+++ K L +LL+K+ D+ +++  LKQL+ 
Subjt:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLRN

Query:  SLKKEVKEEKKKRTTDILDITPITINDVLRKISIKR----EVSVQDLQFEINNLKEEVSNLRREFRK
          K  +++E+K              N++ ++   K+     V++ DLQ E+ N+KEE+  ++ + ++
Subjt:  SLKKEVKEEKKKRTTDILDITPITINDVLRKISIKR----EVSVQDLQFEINNLKEEVSNLRREFRK

A0A251VEY4 Putative reverse transcriptase domain, Zinc finger, CCHC-type, Aspartic peptidase domain protein3.8e-0828.14Show/hide
Query:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLRN
        NELNI ++ K+++  ++ + + S N     +D+ L   E+S++ SS E  M   EC G  +C     IN L+++ K L +LL+K+ D+ +++  LKQL+ 
Subjt:  NELNIDEDCKKEL--LMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLRN

Query:  SLKKEVKEEKKKRTTDILDITPITINDVLRKISIKR----EVSVQDLQFEINNLKEEVSNLRREFRK
          K  +++E+K              N++ ++   K+     V++ DLQ E+ N+KEE+  ++ + ++
Subjt:  SLKKEVKEEKKKRTTDILDITPITINDVLRKISIKR----EVSVQDLQFEINNLKEEVSNLRREFRK

A0A5D3DXC4 CCHC-type domain-containing protein6.0e-0629.76Show/hide
Query:  NELNIDEDCKKELLMTFGSDSSNHSE---STNDDMLELREESDTYSSDEGEMYD----------LECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEH
        N + IDE+ K+ LL    SD    S+   S+ +D + + +E    SS E E Y           + C G     C   INV++KDQ+ L  L++++PDE 
Subjt:  NELNIDEDCKKELLMTFGSDSSNHSE---STNDDMLELREESDTYSSDEGEMYD----------LECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEH

Query:  IRETILKQLRNSLKKEVKEEKKKRTTDILDITPITINDVLRKI--SIKREVSVQDLQFEINNLKEEVS
         + T L +L+ SL+++V ++       I +    +  D+L ++    K  + V+DL  E+  LK EV+
Subjt:  IRETILKQLRNSLKKEVKEEKKKRTTDILDITPITINDVLRKI--SIKREVSVQDLQFEINNLKEEVS

A0A6J1EYM2 uncharacterized protein LOC1114397301.5e-0942.34Show/hide
Query:  NELNIDEDCKKELLMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLRNSL
        NEL+ID++ K +LL    +DS   SE    ++LEL+EESD+YSS E   Y+ E +G R C    CINVL+KDQ++LL++++KV D  I++ I ++LR+++
Subjt:  NELNIDEDCKKELLMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLRNSL

Query:  KKEVKEEKKKR
              E+++R
Subjt:  KKEVKEEKKKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGATCAAACGAACTAAACATTGATGAGGATTGCAAGAAGGAATTACTCATGACATTCGGTTCAGATTCAAGCAACCATTCAGAGAGCACTAACGACGACATGCT
CGAACTGAGAGAAGAGTCAGATACTTATTCCTCAGATGAAGGAGAGATGTATGATCTAGAATGCCAAGGAGGACGATTATGCAACTGTTACAGCTGCATAAATGTTCTGA
GTAAGGATCAAAAGTTACTCCTGAAACTCTTAGACAAAGTACCTGACGAACATATCAGAGAAACAATTCTCAAACAACTTCGTAACTCTCTCAAGAAGGAAGTTAAAGAA
GAAAAGAAGAAAAGAACTACTGACATCCTAGATATCACCCCAATAACAATCAACGATGTATTGAGAAAAATTAGTATCAAAAGAGAAGTCTCAGTGCAAGACCTACAATT
TGAAATCAACAACCTCAAGGAGGAAGTTTCAAACCTTAGAAGAGAGTTCAGAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGATCAAACGAACTAAACATTGATGAGGATTGCAAGAAGGAATTACTCATGACATTCGGTTCAGATTCAAGCAACCATTCAGAGAGCACTAACGACGACATGCT
CGAACTGAGAGAAGAGTCAGATACTTATTCCTCAGATGAAGGAGAGATGTATGATCTAGAATGCCAAGGAGGACGATTATGCAACTGTTACAGCTGCATAAATGTTCTGA
GTAAGGATCAAAAGTTACTCCTGAAACTCTTAGACAAAGTACCTGACGAACATATCAGAGAAACAATTCTCAAACAACTTCGTAACTCTCTCAAGAAGGAAGTTAAAGAA
GAAAAGAAGAAAAGAACTACTGACATCCTAGATATCACCCCAATAACAATCAACGATGTATTGAGAAAAATTAGTATCAAAAGAGAAGTCTCAGTGCAAGACCTACAATT
TGAAATCAACAACCTCAAGGAGGAAGTTTCAAACCTTAGAAGAGAGTTCAGAAAATAA
Protein sequenceShow/hide protein sequence
MEGSNELNIDEDCKKELLMTFGSDSSNHSESTNDDMLELREESDTYSSDEGEMYDLECQGGRLCNCYSCINVLSKDQKLLLKLLDKVPDEHIRETILKQLRNSLKKEVKE
EKKKRTTDILDITPITINDVLRKISIKREVSVQDLQFEINNLKEEVSNLRREFRK