; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005204 (gene) of Snake gourd v1 genome

Gene IDTan0005204
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S acidic ribosomal protein P3
Genome locationLG08:10896912..10898349
RNA-Seq ExpressionTan0005204
SyntenyTan0005204
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR044252 - 60S acidic ribosomal protein P3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148320.1 60S acidic ribosomal protein P3-2 [Cucumis sativus]3.1e-4690.16Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+I+PSSAVFQVI+GGGSGGGF  GG  AAAAPAGGAAPAAAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLFD
        AEKKEEVKEESDD+DLGLSLFD
Subjt:  AEKKEEVKEESDDDDLGLSLFD

XP_008451467.1 PREDICTED: 60S acidic ribosomal protein P3-2 [Cucumis melo]5.3e-4688.52Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+I+P+SAVFQVI+GGG GGGF+GGG  AAAAPAGG APAAAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLFD
        AEKKEEVKEESDD+DLGLSLFD
Subjt:  AEKKEEVKEESDDDDLGLSLFD

XP_022153281.1 60S acidic ribosomal protein P3-2 [Momordica charantia]2.0e-4590.98Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTFVCRSSG EWTAKQYSGDLEGSAASTYELQRKLVQTAL+VDSSGGVQSSFSYISP+SAVFQVIIGGG GGGF+ GG AAAAAP+GGAAP AAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLFD
        AEKKEE KEES DDDLGLSLFD
Subjt:  AEKKEEVKEESDDDDLGLSLFD

XP_022929782.1 60S acidic ribosomal protein P3-2-like [Cucurbita moschata]6.5e-4485.25Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTF+CRSSGG+WTA QYSGDLEGSA STY+LQR LVQ  LSVD SGGVQSSFSY++P+SAVFQVIIGG SGGGF+GGG  AAAAPAGG APAAAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLFD
        AEKKEEVKEESDDDDLG SLFD
Subjt:  AEKKEEVKEESDDDDLGLSLFD

XP_038889531.1 60S acidic ribosomal protein P3-2 [Benincasa hispida]3.7e-4788.52Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+I+P+SAVFQVI+GGG GGGF+GGG  AAAAPAGG APAAAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLFD
        AEKKEEVKEESDD+DLGLSLFD
Subjt:  AEKKEEVKEESDDDDLGLSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0LJB2 Uncharacterized protein1.5e-4690.16Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+I+PSSAVFQVI+GGGSGGGF  GG  AAAAPAGGAAPAAAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLFD
        AEKKEEVKEESDD+DLGLSLFD
Subjt:  AEKKEEVKEESDDDDLGLSLFD

A0A1S3BRK9 60S acidic ribosomal protein P3-22.6e-4688.52Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+I+P+SAVFQVI+GGG GGGF+GGG  AAAAPAGG APAAAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLFD
        AEKKEEVKEESDD+DLGLSLFD
Subjt:  AEKKEEVKEESDDDDLGLSLFD

A0A5D3BNN6 60S acidic ribosomal protein P3-22.6e-4688.52Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+I+P+SAVFQVI+GGG GGGF+GGG  AAAAPAGG APAAAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLFD
        AEKKEEVKEESDD+DLGLSLFD
Subjt:  AEKKEEVKEESDDDDLGLSLFD

A0A6J1DK62 60S acidic ribosomal protein P3-29.7e-4690.98Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTFVCRSSG EWTAKQYSGDLEGSAASTYELQRKLVQTAL+VDSSGGVQSSFSYISP+SAVFQVIIGGG GGGF+ GG AAAAAP+GGAAP AAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLFD
        AEKKEE KEES DDDLGLSLFD
Subjt:  AEKKEEVKEESDDDDLGLSLFD

A0A6J1KB28 60S acidic ribosomal protein P3-2-like3.1e-4485.25Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTF+CRSSGG+WTA QYSGDLEGSA STY+LQR LVQ  LSVD SGGVQSSFSY++P+SAVFQVIIGG SGGGF+GGG  AAAAPAGG APAAAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLFD
        AEKKEEVKEESDDDDLG SLFD
Subjt:  AEKKEEVKEESDDDDLGLSLFD

SwissProt top hitse value%identityAlignment
O24413 60S acidic ribosomal protein P34.7e-2961.79Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGG-GSGGGFVGGGAAAAAAPAGGAAPAAAEA
        MGV+TFVCR++GGEWTAKQ+SG++E SAA+ YELQR+LV  A + DS  GVQSSFS ++PSSAVFQVI+G  G G   V GG    AA +GG   AAAEA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGG-GSGGGFVGGGAAAAAAPAGGAAPAAAEA

Query:  PAEKKEEVKEESDDDDLGLSLFD
        P E+K+E ++E  DDD+G SLFD
Subjt:  PAEKKEEVKEESDDDDLGLSLFD

P52855 60S acidic ribosomal protein P13.1e-0457.35Show/hide
Query:  FSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAPAEKKEEVKEESDDDDLGLSLFD
        F+ +     V  +I+  GSGG   G    AAAAPAGGAA AAA A  EKKEE KEES DDD+G SLFD
Subjt:  FSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAPAEKKEEVKEESDDDDLGLSLFD

P56724 60S acidic ribosomal protein P33.8e-3169.35Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGV+TFVCRSSG EWTAKQ  G+LE SAA+ YELQR+LV  A + DS+ GVQSSFS +SPSSAVFQVIIG   GG  +GGGAAA AA  G    AAAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  --AEKKEEVKEESDDDDLGLSLFD
           EKKEE KEES +DDLG SLFD
Subjt:  --AEKKEEVKEESDDDDLGLSLFD

Q9LVC9 60S acidic ribosomal protein P3-22.4e-3367.77Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVF+FVC+S GGEWTAKQ+ GDLE SA+STY+LQRKLVQTALS DSSGGVQSSFS +SP+SAVF V+IGGG GGGF  GG AAA    GG A AA +  
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLF
         +KKEE +EE  + D G  LF
Subjt:  AEKKEEVKEESDDDDLGLSLF

Q9SVZ6 60S acidic ribosomal protein P3-11.1e-3061.98Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTFVC++ GG W+AKQ+ G+LE SA+STYELQRKLVQ +LS DSSGGVQSSFS +SP+SAVFQVI+GGG GGGF  GGAA++    GGA  AAA   
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLF
         ++K++ + E ++ D G  LF
Subjt:  AEKKEEVKEESDDDDLGLSLF

Arabidopsis top hitse value%identityAlignment
AT4G25890.1 60S acidic ribosomal protein family7.9e-3261.98Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVFTFVC++ GG W+AKQ+ G+LE SA+STYELQRKLVQ +LS DSSGGVQSSFS +SP+SAVFQVI+GGG GGGF  GGAA++    GGA  AAA   
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLF
         ++K++ + E ++ D G  LF
Subjt:  AEKKEEVKEESDDDDLGLSLF

AT5G57290.1 60S acidic ribosomal protein family1.7e-3467.77Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVF+FVC+S GGEWTAKQ+ GDLE SA+STY+LQRKLVQTALS DSSGGVQSSFS +SP+SAVF V+IGGG GGGF  GG AAA    GG A AA +  
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLF
         +KKEE +EE  + D G  LF
Subjt:  AEKKEEVKEESDDDDLGLSLF

AT5G57290.2 60S acidic ribosomal protein family9.7e-3079.01Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGG
        MGVF+FVC+S GGEWTAKQ+ GDLE SA+STY+LQRKLVQTALS DSSGGVQSSFS +SP+SAVF V+IGGG GGGF  GG
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGG

AT5G57290.3 60S acidic ribosomal protein family3.2e-3367.77Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP
        MGVF+FVC+S GGEWTAKQ+ GDLE SA+STY+LQRKLVQTALS DSSGGVQSSFS +SP+SAVF V+IGGG GGGF  GG AAA    GG A AA +  
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAP

Query:  AEKKEEVKEESDDDDLGLSLF
         +KKEE +EE  + D G  LF
Subjt:  AEKKEEVKEESDDDDLGLSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGCGAGTGGACCGCCAAGCAGTACTCCGGCGACCTTGAAGGCTCCGCCGCTTCCACCTATGAGCTCCAGAGGAA
ACTCGTTCAGACTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCCTTCTCTTACATCTCTCCCAGCTCCGCCGTTTTCCAGGTGATCATTGGTGGCGGTAGCG
GCGGTGGTTTCGTTGGTGGTGGCGCAGCAGCTGCAGCTGCCCCTGCTGGAGGAGCTGCACCAGCTGCAGCTGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAG
AGTGATGATGATGACCTTGGCCTATCACTTTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
CTTTAGCTAGGGTTTCCTCTCCTCAACATAAAAACCAAACCCCAATCCGCAGAAGAGCCGTCCAATCCAACTCTCTCGCTTTCTTCTTCGCATTTCGCTTCAAGCAAAAT
CCCCGTTCGAAGATCAAACAATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGCGAGTGGACCGCCAAGCAGTACTCCGGCGACCTTGAAGGCTCCGCCGCTTCC
ACCTATGAGCTCCAGAGGAAACTCGTTCAGACTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCCTTCTCTTACATCTCTCCCAGCTCCGCCGTTTTCCAGGT
GATCATTGGTGGCGGTAGCGGCGGTGGTTTCGTTGGTGGTGGCGCAGCAGCTGCAGCTGCCCCTGCTGGAGGAGCTGCACCAGCTGCAGCTGAAGCCCCAGCTGAGAAGA
AGGAAGAGGTGAAGGAAGAGAGTGATGATGATGACCTTGGCCTATCACTTTTTGATTAGTTGGTATAATTGCTGGTTATTGTTTATCAATCTCACAATTTTTAGCGCTCA
ACTTTTCTCTTCAGGAAATTATGTCTATGCTTTTACTTGAATTTGCCTGTTCAGTTGCTGTTCTTGTTAAGGACATGAAATTTTGCTACTGACCTTTGTTAAATGGTTGA
GAATTAGATGTGTTCTTTTGGGACTTGTGTTTGAGAAGTTCTTTCTGATTACCTGTCATTGATTTATCTTTTAGTTGGTGATCTTCTAGGCAGTTGTTTTATTTTCTATC
TCATTTTGGTTTAGGGCACAAATGATTGAATTGAGTTTAGTGATATTGAATTTTTTGGTTCGAATCA
Protein sequenceShow/hide protein sequence
MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYISPSSAVFQVIIGGGSGGGFVGGGAAAAAAPAGGAAPAAAEAPAEKKEEVKEE
SDDDDLGLSLFD