; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005239 (gene) of Snake gourd v1 genome

Gene IDTan0005239
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGibberellin-regulated family protein
Genome locationLG01:115863453..115866091
RNA-Seq ExpressionTan0005239
SyntenyTan0005239
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608594.1 Snakin-2, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3374.77Show/hide
Query:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR
        MAIS LSK+L     MSLL++ LV A E  VNSI GVAA P  I +IDCGGACA RCKLSSRP+LCKRACGTCCARC+CVPPGTSGGYETCPCYA +TT 
Subjt:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR

Query:  DGRRKCP
         GRRKCP
Subjt:  DGRRKCP

XP_022139249.1 gibberellin-regulated protein 11-like [Momordica charantia]3.9e-3472.9Show/hide
Query:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR
        MA S+LSK L    FMSLL++  VGAHE     ++G  ADP KI NIDCGGACA RCKLSSRPNLCKRACGTCCARCSCVPPGTSGGY+ CPCYA +TTR
Subjt:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR

Query:  DGRRKCP
         GR KCP
Subjt:  DGRRKCP

XP_022940222.1 gibberellin-regulated protein 1-like [Cucurbita moschata]6.7e-3475.7Show/hide
Query:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR
        MAIS LSK+L     MSLL++ LV A E  VNSI GVAA P  I +IDCGGACA RCKLSSRPNLCKRACGTCCARC+CVPPGTSGGYETCPCYA +TT 
Subjt:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR

Query:  DGRRKCP
         GRRKCP
Subjt:  DGRRKCP

XP_022982305.1 gibberellin-regulated protein 1-like [Cucurbita maxima]3.9e-3475.7Show/hide
Query:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR
        MAIS LSK+L     MSLL++ LVGA E  VNSI GVAA P  + +IDCGGACA RCKLSSRP+LCKRACGTCCARC+CVPPGTSGGYETCPCYA MTT 
Subjt:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR

Query:  DGRRKCP
         GRRKCP
Subjt:  DGRRKCP

XP_023525231.1 snakin-2-like [Cucurbita pepo subsp. pepo]3.9e-3475.7Show/hide
Query:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR
        MAIS LSK+L     MSLL++ LVGA +  VNSI GVAA P  I +IDCGGACA RCKLSSRP+LCKRACGTCCARC+CVPPGTSGGYETCPCYA MTT 
Subjt:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR

Query:  DGRRKCP
         GRRKCP
Subjt:  DGRRKCP

TrEMBL top hitse value%identityAlignment
A0A1S3CSM7 gibberellin-regulated protein 11-like2.7e-2870.65Show/hide
Query:  MSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP
        MSLL++  V A +++V    GVAA P    NI+CGGACA RCKLSSRPNLCKRACGTCCARCSCVPPGTSG Y  CPCYA++TT  GRRKCP
Subjt:  MSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP

A0A5D3E7E4 Gibberellin-regulated protein 11-like2.7e-2870.65Show/hide
Query:  MSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP
        MSLL++  V A +++V    GVAA P    NI+CGGACA RCKLSSRPNLCKRACGTCCARCSCVPPGTSG Y  CPCYA++TT  GRRKCP
Subjt:  MSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP

A0A6J1CCE1 gibberellin-regulated protein 11-like1.9e-3472.9Show/hide
Query:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR
        MA S+LSK L    FMSLL++  VGAHE     ++G  ADP KI NIDCGGACA RCKLSSRPNLCKRACGTCCARCSCVPPGTSGGY+ CPCYA +TTR
Subjt:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR

Query:  DGRRKCP
         GR KCP
Subjt:  DGRRKCP

A0A6J1FJ01 gibberellin-regulated protein 1-like3.2e-3475.7Show/hide
Query:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR
        MAIS LSK+L     MSLL++ LV A E  VNSI GVAA P  I +IDCGGACA RCKLSSRPNLCKRACGTCCARC+CVPPGTSGGYETCPCYA +TT 
Subjt:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR

Query:  DGRRKCP
         GRRKCP
Subjt:  DGRRKCP

A0A6J1J2A8 gibberellin-regulated protein 1-like1.9e-3475.7Show/hide
Query:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR
        MAIS LSK+L     MSLL++ LVGA E  VNSI GVAA P  + +IDCGGACA RCKLSSRP+LCKRACGTCCARC+CVPPGTSGGYETCPCYA MTT 
Subjt:  MAISLLSKSL----FMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTR

Query:  DGRRKCP
         GRRKCP
Subjt:  DGRRKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 113.6e-2256.57Show/hide
Query:  LLSKSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP
        +L  SL +SLL++  V  H  MV S D           IDC   C  RC LSSRPNLC RACGTCCARC+CV PGTSG Y+ CPCY  +TT  GRRKCP
Subjt:  LLSKSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP

P46687 Gibberellin-regulated protein 32.6e-2048.96Show/hide
Query:  KSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP
        +S  + LL++  +   E+ V++ +        ++ IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA +TTR GR KCP
Subjt:  KSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP

P46688 Gibberellin-regulated protein 23.4e-2050Show/hide
Query:  KSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP
        +S  + LL+I  +  +E+ V++ DG       ++ IDCGG C  RC  SSR  LC RAC +CC+RC+CVPPGTSG    CPCYA +TT  GR KCP
Subjt:  KSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP

P46689 Gibberellin-regulated protein 11.8e-2155.77Show/hide
Query:  MAIS-LLSKSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGR
        MAIS  L  SL +SLL++ LV A        +G A        IDCG AC  RC+LS RP LC RACGTCC RC+CVPPGT G Y+ C CYA +TT  GR
Subjt:  MAIS-LLSKSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGR

Query:  RKCP
        RKCP
Subjt:  RKCP

Q93X17 Snakin-29.1e-2658.25Show/hide
Query:  LSKSLFMSLLLISLVGAHEIMVNSIDGVAADPV-----KILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRR
        +SK+LF SLLL SL+   ++     D V ++ +         IDCGGACA RC+LSSRP LC RACGTCCARC+CVPPGTSG  ETCPCYA +TT   +R
Subjt:  LSKSLFMSLLLISLVGAHEIMVNSIDGVAADPV-----KILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRR

Query:  KCP
        KCP
Subjt:  KCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 11.3e-2255.77Show/hide
Query:  MAIS-LLSKSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGR
        MAIS  L  SL +SLL++ LV A        +G A        IDCG AC  RC+LS RP LC RACGTCC RC+CVPPGT G Y+ C CYA +TT  GR
Subjt:  MAIS-LLSKSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGR

Query:  RKCP
        RKCP
Subjt:  RKCP

AT1G75750.2 GAST1 protein homolog 11.3e-2256.73Show/hide
Query:  MAIS-LLSKSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGR
        MAIS  L  SL +SLL++ LV A E      +G A        IDCG AC  RC+LS RP LC RACGTCC RC+CVPPGT G Y+ C CYA +TT  GR
Subjt:  MAIS-LLSKSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGR

Query:  RKCP
        RKCP
Subjt:  RKCP

AT2G18420.1 Gibberellin-regulated family protein2.5e-2356.57Show/hide
Query:  LLSKSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP
        +L  SL +SLL++  V  H  MV S D           IDC   C  RC LSSRPNLC RACGTCCARC+CV PGTSG Y+ CPCY  +TT  GRRKCP
Subjt:  LLSKSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP

AT4G09600.1 GAST1 protein homolog 31.8e-2148.96Show/hide
Query:  KSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP
        +S  + LL++  +   E+ V++ +        ++ IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA +TTR GR KCP
Subjt:  KSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP

AT4G09610.1 GAST1 protein homolog 22.4e-2150Show/hide
Query:  KSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP
        +S  + LL+I  +  +E+ V++ DG       ++ IDCGG C  RC  SSR  LC RAC +CC+RC+CVPPGTSG    CPCYA +TT  GR KCP
Subjt:  KSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTTCTCTTCTTTCTAAATCTCTTTTCATGTCCCTTCTCCTAATTTCTTTGGTTGGAGCTCATGAAATAATGGTGAACTCAATTGATGGTGTTGCAGCTGATCC
TGTTAAGATTCTAAACATTGATTGTGGAGGAGCTTGTGCCTGGAGATGCAAATTATCTTCAAGGCCGAACCTATGCAAGAGAGCATGTGGCACGTGCTGTGCACGTTGCA
GCTGTGTGCCGCCGGGCACTTCCGGCGGCTACGAAACCTGCCCTTGCTACGCCCGCATGACCACTCGCGACGGCCGGCGAAAGTGTCCCTAA
mRNA sequenceShow/hide mRNA sequence
GAAACATTGGCTTAATTTTTAGGTAGCTTTCTGTTTCTGATATCTCTCTGTTTCCTCGTCGTCTTTCGAGATGGCCATTTCTCTTCTTTCTAAATCTCTTTTCATGTCCC
TTCTCCTAATTTCTTTGGTTGGAGCTCATGAAATAATGGTGAACTCAATTGATGGTGTTGCAGCTGATCCTGTTAAGATTCTAAACATTGATTGTGGAGGAGCTTGTGCC
TGGAGATGCAAATTATCTTCAAGGCCGAACCTATGCAAGAGAGCATGTGGCACGTGCTGTGCACGTTGCAGCTGTGTGCCGCCGGGCACTTCCGGCGGCTACGAAACCTG
CCCTTGCTACGCCCGCATGACCACTCGCGACGGCCGGCGAAAGTGTCCCTAAATCATCAACATCAATAATATCAGCTTCAATTCTACCTTCATAATATAATATATAATTA
AGAGTGAAATTAATTATGTAAATTAATAACTGATATCTGGGAAAACCAGATTCTTCTCTATCTATCTCTTTTGTTTGTTGTTGTTGTCCCTATTTTATTATGTGTGAATT
AGAACATGATATTAAATTATTCTGTACGTTACATGGACTTCAAAGAAAAGTGGGTTCGTTTTCGATTCTGTTTGTAAATAAAGTTAGAATTAATGGATGATGGATCAAAT
GCGTTTTGAACCGACCATATTAAATTTGGCATTTCAGTTTTGACAAATTATTGCAGCTTCTTTCTGTAAAGTTTGTGATATATATATGAAATGGTTGGATGAGCCACTAC
AATCTAGCTAGTAAAATAGATTAGCGTTTTATTAAGAAGTATGTAGATTTTTTAGTCTATATGCATCTATTTATACCTACTTTAATTCATTCTTGAGTTATACTCACGTT
GGTATCACTTGATGCTATATCATTTTTTTATCAATTGTTTTCGCAACCTTTTATAATCTGAGAATATATGTTGAATACTTAACATAATATAATTAAAGTGTATTGTTATA
GGTAAAATTGGACCAACAAGAATGAACAAGTCAAATAGCCAAAGAATGAGAAACTTAGTATCAAATCAAAGTGGGCCGAACCAAGACGGGATGAGACGAGAAGGATTGCC
CGGGCTCCGACCCAAGCACGTGGTCGGCCTCGGCATAGGCCGAGGCCGACCAGGGTAGAGCCCTCCAATTTGGGCTCTACCCTAACCCAACATCCCAAGAAATGGGTCCG
GGCTTGGGCCCCAGACCAAACCCATGGTCGGCCTCGGATGAGGCCGAAGCCAACCAGACCCGAAGTTGTATCCTGGTCTTCGTTCCAATCCTAGAAGACCCGTAAGCCTG
ATTCCAGCCCTGGTCCGACTTTTCCTTTTCCCAAAGGGCCAAGGAAACCCATCAGAGATGGAGGGGAGACTATTTAAACTCTCTCAATAAAAGAGAAGAGGTAAGTGAAT
TCTGGTGACCATTATACAAAACTCCTCTACAATTCTCTTCGAAACCCTCACTGACTTAGCCATCGGAGCTTGCGTGGCCTACACCACATCGGTGTCCAGATTTTCCTTGT
CTTGCACGCTGCGTTCTTCCCCTGAGAACTACAAATTTACAGTCGTTGTCAAGTGGAGGTCAGGTGCATTCTCCTGTCCAAAATTTGGCAACAACATGTATAAATGTATA
TCATTTGCTTTTAAAATTGAGATATTTTACATTTCCTCG
Protein sequenceShow/hide protein sequence
MAISLLSKSLFMSLLLISLVGAHEIMVNSIDGVAADPVKILNIDCGGACAWRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYARMTTRDGRRKCP