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Tan0005252 (gene) of Snake gourd v1 genome

Gene IDTan0005252
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionextensin-like
Genome locationLG04:18163049..18163454
RNA-Seq ExpressionTan0005252
SyntenyTan0005252
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607579.1 hypothetical protein SDJN03_00921, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0957.33Show/hide
Query:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDPSQPPPPPKVKTLTVVDGHISTKP
        M FKA LCLFLLL  ALVSSAR   H  SGKQ T  V+ DY DPG  P   P  PP PP  K   V D HI+ KP
Subjt:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDPSQPPPPPKVKTLTVVDGHISTKP
XP_022948580.1 extensin-like isoform X1 [Cucurbita moschata]1.6e-0856.94Show/hide
Query:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDP----SQPPPPPKVKTLTVVD
        M FK  LCL  LL  ALVSSARI   SVSGKQAT IVI+DY+DPG NP   P      PPPPP  +   + D
Subjt:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDP----SQPPPPPKVKTLTVVD
XP_022998671.1 extensin-like [Cucurbita maxima]2.4e-0958.33Show/hide
Query:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDP----SQPPPPPKVKTLTVVD
        M FKA LCL  LL  ALVSSA+I   SVSGKQAT IVI+DY+DPG NP   P      PPPPP  K   + D
Subjt:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDP----SQPPPPPKVKTLTVVD
XP_023525722.1 extensin-like isoform X1 [Cucurbita pepo subsp. pepo]1.0e-0755.56Show/hide
Query:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDP----SQPPPPPKVKTLTVVD
        M FK  LCL  LL   LV+SARI   SVSGKQAT IVI+DY+DPG NP   P      PPPPP  K   + D
Subjt:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDP----SQPPPPPKVKTLTVVD
XP_038895781.1 circumsporozoite protein-like [Benincasa hispida]2.1e-0868.52Show/hide
Query:  FKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDPSQPP
        FKA L  FLLL  AL++ ARITPHS S  Q   I I+DYADPGANPRHDP+QPP
Subjt:  FKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDPSQPP
TrEMBL top hitse value%identityAlignment
A0A0A0LV67 Uncharacterized protein7.2e-0752.78Show/hide
Query:  KAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDPSQPPPPPKVKTLTVVDGHISTKP
        KA L L LLL   LV+SARI PHS + + A M  I+DY DPGANPRH+P  PPP    +   V DG I+  P
Subjt:  KAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDPSQPPPPPKVKTLTVVDGHISTKP
A0A5A7SMH7 Uncharacterized protein3.2e-0756.76Show/hide
Query:  FKAHL-CLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDPSQPPPPPKVKTLTVVDGHISTKP
        FKA L  LFLLL  ALV+SARI PHS + + A M  I+DY DPGANPRHDP  PPPP + +   V D  I   P
Subjt:  FKAHL-CLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDPSQPPPPPKVKTLTVVDGHISTKP
A0A5A7SPC6 Protein PSY31.4e-0758.21Show/hide
Query:  KAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDPSQPPPPPKVKTLTVVDGH
        KA L LFLLL   LV+SARI PHS + + A M  I+DY DPGANPRHDP   PPP +   ++VV GH
Subjt:  KAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDPSQPPPPPKVKTLTVVDGH
A0A6J1GAA0 extensin-like isoform X17.7e-0956.94Show/hide
Query:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDP----SQPPPPPKVKTLTVVD
        M FK  LCL  LL  ALVSSARI   SVSGKQAT IVI+DY+DPG NP   P      PPPPP  +   + D
Subjt:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDP----SQPPPPPKVKTLTVVD
A0A6J1KAU3 extensin-like1.2e-0958.33Show/hide
Query:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDP----SQPPPPPKVKTLTVVD
        M FKA LCL  LL  ALVSSA+I   SVSGKQAT IVI+DY+DPG NP   P      PPPPP  K   + D
Subjt:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDP----SQPPPPPKVKTLTVVD
SwissProt top hitse value%identityAlignment
Q8LE92 Protein PSY24.2e-0446.77Show/hide
Query:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQAT-------MIVIDDYADPGANPRHDPSQP
        M+F   L LFL+L L LV+S+      VSG   T       M+ I+DY DP AN RHDPS P
Subjt:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQAT-------MIVIDDYADPGANPRHDPSQP
Q941C7 Protein PSY11.1e-0442.19Show/hide
Query:  MNFKAHLCLFLLLLLALVSSARITPHSVSG--------KQATMIVIDDYADPGANPRHDPSQPP
        M F   L + LLL L + SS    P SVSG        +   M+ ++DY DP ANP+HDP  PP
Subjt:  MNFKAHLCLFLLLLLALVSSARITPHSVSG--------KQATMIVIDDYADPGANPRHDPSQPP
Arabidopsis top hitse value%identityAlignment
AT2G29995.1 unknown protein4.3e-0446.15Show/hide
Query:  LCLFLLLLLALVSSARIT------PHSVSGKQATMIVIDDYADPGANPRHDP
        LCLFL    AL+SSARI+        +V  +++ M+  +DY+DP AN RHDP
Subjt:  LCLFLLLLLALVSSARIT------PHSVSGKQATMIVIDDYADPGANPRHDP
AT3G47295.1 unknown protein3.0e-0546.77Show/hide
Query:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQAT-------MIVIDDYADPGANPRHDPSQP
        M+F   L LFL+L L LV+S+      VSG   T       M+ I+DY DP AN RHDPS P
Subjt:  MNFKAHLCLFLLLLLALVSSARITPHSVSGKQAT-------MIVIDDYADPGANPRHDPSQP
AT5G58650.1 plant peptide containing sulfated tyrosine 17.8e-0642.19Show/hide
Query:  MNFKAHLCLFLLLLLALVSSARITPHSVSG--------KQATMIVIDDYADPGANPRHDPSQPP
        M F   L + LLL L + SS    P SVSG        +   M+ ++DY DP ANP+HDP  PP
Subjt:  MNFKAHLCLFLLLLLALVSSARITPHSVSG--------KQATMIVIDDYADPGANPRHDPSQPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTTAAAGCTCATCTTTGCCTTTTTCTCTTGCTCTTGCTCGCCCTTGTCAGCTCAGCTCGGATCACGCCCCATTCAGTTTCAGGAAAGCAAGCGACAATGATTGT
GATAGACGACTATGCAGATCCAGGAGCTAATCCAAGACATGATCCAAGCCAACCGCCACCGCCACCAAAAGTTAAGACTTTAACCGTTGTGGATGGCCACATTAGCACCA
AACCCTAA
mRNA sequenceShow/hide mRNA sequence
GAAATACAAAGGATCAAAGAACAGCATGAATTTTAAAGCTCATCTTTGCCTTTTTCTCTTGCTCTTGCTCGCCCTTGTCAGCTCAGCTCGGATCACGCCCCATTCAGTTT
CAGGAAAGCAAGCGACAATGATTGTGATAGACGACTATGCAGATCCAGGAGCTAATCCAAGACATGATCCAAGCCAACCGCCACCGCCACCAAAAGTTAAGACTTTAACC
GTTGTGGATGGCCACATTAGCACCAAACCCTAAACAAATTCATTTGTTAGGGGAGAACCTCTTGG
Protein sequenceShow/hide protein sequence
MNFKAHLCLFLLLLLALVSSARITPHSVSGKQATMIVIDDYADPGANPRHDPSQPPPPPKVKTLTVVDGHISTKP