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Tan0005261 (gene) of Snake gourd v1 genome

Gene IDTan0005261
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 25-like
Genome locationLG01:52011237..52013299
RNA-Seq ExpressionTan0005261
SyntenyTan0005261
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030012.1 CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperma]9.2e-2565.38Show/hide
Query:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAG-----SEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
        M+ YSP CK +AVMGFI LLLVNGSHQ G+ V  G     +   A+  G  +E E VG  GG    VV  EWHLNYMSKRRVPNGPDPIHNRRAGNSGRP
Subjt:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAG-----SEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

XP_022946527.1 uncharacterized protein LOC111450563 [Cucurbita moschata]5.4e-2566.67Show/hide
Query:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAG---SEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        M+ YSP CK +AVMGFI LLLVNGSHQ G+ V  G   +   A+  G  +E E VG  GG    VV  EWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAG---SEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA

XP_022999782.1 uncharacterized protein LOC111494028 [Cucurbita maxima]2.1e-2465.69Show/hide
Query:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAG---SEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        M+ YSP CK +AVMGFI LLLVNGSHQ G+ V  G   +   A+  G  +E E VG  GG    VV  EWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAG---SEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA

XP_023521565.1 uncharacterized protein LOC111785387 [Cucurbita pepo subsp. pepo]7.1e-2566.67Show/hide
Query:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAGSEMM---AKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        M+ YSP CK +AVMGFI LLLVNGSHQ G+ V  G   +   A+  G  +E E VG  GG    VV  EWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAGSEMM---AKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA

XP_038886261.1 uncharacterized protein LOC120076488 [Benincasa hispida]8.3e-2664.86Show/hide
Query:  MTCYSP-CKV---VAVMGFICLLLVNGSHQTGEPVVAGSE---------MMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRR
        M+CYSP CK+   +AVM FI LLLVNGSHQ  +PV A  E         M A+  G  +E + V    GG GKVVHPEWHLNYMSKRRVPNGPDPIHNRR
Subjt:  MTCYSP-CKV---VAVMGFICLLLVNGSHQTGEPVVAGSE---------MMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRR

Query:  AGNSGRPPGKA
        AGNSGRPPGKA
Subjt:  AGNSGRPPGKA

TrEMBL top hitse value%identityAlignment
A0A0A0KJ25 Uncharacterized protein1.4e-2366.67Show/hide
Query:  MTCY-SPCKV--VAVMGFICLLLVNGSHQTGEPVVAGSEMMA---KSRGFFRETEAVGSGGGGSGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGR
        MTCY S CK   + +M FI LLL NGS Q  EPVV G    A   +  G  +ET  V  GGG  GKVV HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGR
Subjt:  MTCY-SPCKV--VAVMGFICLLLVNGSHQTGEPVVAGSEMMA---KSRGFFRETEAVGSGGGGSGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNSGR

Query:  PPGKA
        PPGKA
Subjt:  PPGKA

A0A5A7TRB3 Clavata3/esr-related 26, putative isoform 13.5e-2263.55Show/hide
Query:  MTCY---SPCKV--VAVMGFICLLLVNGSHQTGEPVVAG---SEMMAKSRGFFRETEAVGSGGGGSGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNS
        MTCY   S CK   + VM FI LLL NGS Q  EPVV G   + M  +  G F++T  V     G GKV  HPEWHLNYMSKRRVPNGPDPIHNRRAGNS
Subjt:  MTCY---SPCKV--VAVMGFICLLLVNGSHQTGEPVVAG---SEMMAKSRGFFRETEAVGSGGGGSGKVV-HPEWHLNYMSKRRVPNGPDPIHNRRAGNS

Query:  GRPPGKA
        GRPPGKA
Subjt:  GRPPGKA

A0A6J1DXT1 CLAVATA3/ESR (CLE)-related protein 25-like9.3e-2364.08Show/hide
Query:  MTCYSPCKV----VAVMGFICLLLV-NGSHQTGEPVVAGSEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP
        MT Y   K     +A++ FI LLLV   SH TG P V   E+ A+S   FRET A   GGG  GK+VHP+WHLNYMSKRRVPNGPDPIHNRRAGNSGRPP
Subjt:  MTCYSPCKV----VAVMGFICLLLV-NGSHQTGEPVVAGSEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP

Query:  GKA
        GKA
Subjt:  GKA

A0A6J1G3Y8 uncharacterized protein LOC1114505632.6e-2566.67Show/hide
Query:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAG---SEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        M+ YSP CK +AVMGFI LLLVNGSHQ G+ V  G   +   A+  G  +E E VG  GG    VV  EWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAG---SEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA

A0A6J1KBR7 uncharacterized protein LOC1114940281.0e-2465.69Show/hide
Query:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAG---SEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG
        M+ YSP CK +AVMGFI LLLVNGSHQ G+ V  G   +   A+  G  +E E VG  GG    VV  EWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPG
Subjt:  MTCYSP-CKVVAVMGFICLLLVNGSHQTGEPVVAG---SEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPG

Query:  KA
        KA
Subjt:  KA

SwissProt top hitse value%identityAlignment
Q8LFL4 CLAVATA3/ESR (CLE)-related protein 258.4e-0542.53Show/hide
Query:  VVAVMGFICLLLVNGSHQTGEPVVAGSEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP
        V+A +G I  LLV G      P V  SE +   R               SGK V    +L ++SKR+VPNGPDPIHNR+A  S RPP
Subjt:  VVAVMGFICLLLVNGSHQTGEPVVAGSEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP

Arabidopsis top hitse value%identityAlignment
AT1G69970.2 CLAVATA3/ESR-RELATED 261.9e-0778.12Show/hide
Query:  LNYM-SKRRVPNGPDPIHNRRAGNSGRPPGKA
        L+Y+ SKR+VP GPDPIHNRRAGNS RPPG+A
Subjt:  LNYM-SKRRVPNGPDPIHNRRAGNSGRPPGKA

AT3G28455.1 CLAVATA3/ESR-RELATED 256.0e-0642.53Show/hide
Query:  VVAVMGFICLLLVNGSHQTGEPVVAGSEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP
        V+A +G I  LLV G      P V  SE +   R               SGK V    +L ++SKR+VPNGPDPIHNR+A  S RPP
Subjt:  VVAVMGFICLLLVNGSHQTGEPVVAGSEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTGTTATTCTCCTTGTAAGGTCGTCGCTGTTATGGGGTTTATCTGCCTTCTGTTGGTGAATGGTTCGCATCAAACGGGAGAACCCGTCGTGGCGGGGTCGGAGAT
GATGGCTAAATCCAGAGGATTTTTCAGAGAGACGGAGGCAGTCGGCAGCGGTGGTGGTGGCAGCGGCAAGGTTGTTCATCCGGAGTGGCATCTCAACTACATGAGCAAAA
GACGAGTACCCAATGGCCCAGATCCTATCCATAACAGGAGGGCAGGAAACTCTGGACGACCACCAGGCAAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ACAATGCAAAGTAAAAGATGAGTGTGTCGTATTTTATGACCCCCTTCTCAGTATAAAGCAAGCAGGAAGTCCCTCCATCTCACGTTTGAAGCCATTTATTTTTCTTTTCT
TTCTCTTTCTCTCTCTCTCTAGGTTCGAGAAAGTGCAGCAGAATCCTAAAGAAACCCAACCCAACCACCTTTGAATAACCTCTTCTGAAGCAAAATAAAAACAAAACAAC
ATTTCTACTTGACCCTCTAACAAGAGTTCTCTCCCTTTCTCTCAACAACCAAAAATCAAAATCCTGTCATGTAGTGATTTCTCTCAAAGAGAGTGAGAGAAAATGACTTG
TTATTCTCCTTGTAAGGTCGTCGCTGTTATGGGGTTTATCTGCCTTCTGTTGGTGAATGGTTCGCATCAAACGGGAGAACCCGTCGTGGCGGGGTCGGAGATGATGGCTA
AATCCAGAGGATTTTTCAGAGAGACGGAGGCAGTCGGCAGCGGTGGTGGTGGCAGCGGCAAGGTTGTTCATCCGGAGTGGCATCTCAACTACATGAGCAAAAGACGAGTA
CCCAATGGCCCAGATCCTATCCATAACAGGAGGGCAGGAAACTCTGGACGACCACCAGGCAAGGCTTAGCAGTAGGAAAGAAAAGCTTTGTGATGAATTGAGATTTTCGA
ATGACACAAGATGCATGCTCTGCCATCTTGTATGTATTACTATAGGAATTAAGGGTGAAAATCGATCCGATCGATTTTTCGTTAAGATTTAGGACCCGTTTGATAACATT
TTTTTTTTAATTTTTAGCTTTAGTTTTTAAAAATTCATGTTTATTTACTAATTATTTCTCTTTGTTGGGTTATCTACTCTAAGAAAATGTTTTTGAAGTTTAAGTTGTGT
TTTAAAAACATGAATAAATAGTTTCTAAGAAGCTGTTTTATGTTTTTAAAATTTGGCTAAATTTTAACAAATATATTTGAAGAATTTTGAAAACTAGACAAGGAAATAAA
CAAAAAGATTAATATGCTTAAAAATATAAAACTAAAAACTAAATCGTCAATCTTCTTTTCTTTTCATTTCTACGGAAGTGTAGTTAAGCTAGATTTTAACTATGATGTGT
TAGCGCTTTGAAA
Protein sequenceShow/hide protein sequence
MTCYSPCKVVAVMGFICLLLVNGSHQTGEPVVAGSEMMAKSRGFFRETEAVGSGGGGSGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA