; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005279 (gene) of Snake gourd v1 genome

Gene IDTan0005279
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionethylene-responsive transcription factor ERF098-like
Genome locationLG06:76711599..76712161
RNA-Seq ExpressionTan0005279
SyntenyTan0005279
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026173.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-5081.68Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---------GPRR
        MD EG+SGNDQGGE RYRGVR+RPWGKFA+EIRDSSR GAR+WLGTFNTAEEAARAYDRAAYAMRGHLAVLNFP+EYPSLGGSSSSS          PRR
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---------GPRR

Query:  QGQSESQVIEFECVDDKVLEELLEYEEKRKK
         G  E QVIEFECVDD++LEELLEYEEKRKK
Subjt:  QGQSESQVIEFECVDDKVLEELLEYEEKRKK

XP_022930414.1 ethylene-responsive transcription factor ERF098-like [Cucurbita moschata]1.0e-4980.92Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---------GPRR
        MD EG+SGNDQ GE RYRGVR+RPWGKFA+EIRDSSR GAR+WLGTFNTAEEAARAYDRAAYAMRGHLAVLNFP+EYPSLGGSSSSS          PRR
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---------GPRR

Query:  QGQSESQVIEFECVDDKVLEELLEYEEKRKK
         G  E QVIEFECVDD++LEELLEYEEKRKK
Subjt:  QGQSESQVIEFECVDDKVLEELLEYEEKRKK

XP_023000622.1 ethylene-responsive transcription factor ERF098-like [Cucurbita maxima]7.7e-5388.8Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---GPRRQGQSES
        MD EG SGNDQGGE RYRGVR+RPWGKFA+EIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS    PRR G SE 
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---GPRRQGQSES

Query:  QVIEFECVDDKVLEELLEYEEKRKK
        QVIEFECVDD++LEELLEYEEKRKK
Subjt:  QVIEFECVDDKVLEELLEYEEKRKK

XP_023515268.1 ethylene-responsive transcription factor ERF098-like [Cucurbita pepo subsp. pepo]2.1e-5081.68Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---------GPRR
        MD EG+SGNDQGGE RYRGVR+RPWGKFA+EIRDSSR GAR+WLGTFNTAEEAARAYDRAAYAMRGHLAVLNFP+EYPSLGGSSSSS          PRR
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---------GPRR

Query:  QGQSESQVIEFECVDDKVLEELLEYEEKRKK
         G  E QVIEFECVDD++LEELLEYEEKRKK
Subjt:  QGQSESQVIEFECVDDKVLEELLEYEEKRKK

XP_038876105.1 ethylene-responsive transcription factor ERF098-like [Benincasa hispida]1.1e-5188.71Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS-GPRRQGQ-SESQ
        MDEEGKS NDQGGE RYRGVR+RPWGKFAAEIRDSSRHGAR+WLGTFNTAEEAARAYDRAAY MRGHLAVLNFPNEYPSLGGSSS++ G RRQGQ  +SQ
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS-GPRRQGQ-SESQ

Query:  VIEFECVDDKVLEELLEYEEKRKK
        VIE EC+DDKVLEELLEYEEKRKK
Subjt:  VIEFECVDDKVLEELLEYEEKRKK

TrEMBL top hitse value%identityAlignment
A0A1S3CCW3 ethylene-responsive transcription factor ERF0982.8e-4882.95Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS-------GPRRQG
        MDEEGKS NDQGGE RYRGVR+RPWGKFAAEIRDSSRHGAR+WLGTFNTAEEAARAYDRAAY MRGHLAVLNFPNEYPSLGGSSS+S        PR QG
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS-------GPRRQG

Query:  QSESQVIEFECVDDKVLEELLEYEEKRKK
            QVIE E +DDKVLEELLEYEEKRKK
Subjt:  QSESQVIEFECVDDKVLEELLEYEEKRKK

A0A5A7VH52 Ethylene-responsive transcription factor ERF0982.8e-4882.95Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS-------GPRRQG
        MDEEGKS NDQGGE RYRGVR+RPWGKFAAEIRDSSRHGAR+WLGTFNTAEEAARAYDRAAY MRGHLAVLNFPNEYPSLGGSSS+S        PR QG
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS-------GPRRQG

Query:  QSESQVIEFECVDDKVLEELLEYEEKRKK
            QVIE E +DDKVLEELLEYEEKRKK
Subjt:  QSESQVIEFECVDDKVLEELLEYEEKRKK

A0A6J1ERC5 ethylene-responsive transcription factor ERF098-like5.0e-5080.92Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---------GPRR
        MD EG+SGNDQ GE RYRGVR+RPWGKFA+EIRDSSR GAR+WLGTFNTAEEAARAYDRAAYAMRGHLAVLNFP+EYPSLGGSSSSS          PRR
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---------GPRR

Query:  QGQSESQVIEFECVDDKVLEELLEYEEKRKK
         G  E QVIEFECVDD++LEELLEYEEKRKK
Subjt:  QGQSESQVIEFECVDDKVLEELLEYEEKRKK

A0A6J1KE54 ethylene-responsive transcription factor ERF098-like3.7e-5388.8Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---GPRRQGQSES
        MD EG SGNDQGGE RYRGVR+RPWGKFA+EIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS    PRR G SE 
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSS---GPRRQGQSES

Query:  QVIEFECVDDKVLEELLEYEEKRKK
        QVIEFECVDD++LEELLEYEEKRKK
Subjt:  QVIEFECVDDKVLEELLEYEEKRKK

A0A6J1KVJ6 ethylene-responsive transcription factor ERF098-like1.5e-4982.81Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSSG------PRRQGQ
        MDEE +SG+DQGGE RYRGVR+RPWGKFAAEIRDSSR+GARVWLGTFNTAEEAARAYDRAAY MRGHLAVLNFP+EYPSLGGSSS S       PRRQGQ
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSSG------PRRQGQ

Query:  SESQVIEFECVDDKVLEELLEYEEKRKK
            VIE EC+DDKVLEELLEYEEKRKK
Subjt:  SESQVIEFECVDDKVLEELLEYEEKRKK

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI51.9e-2280.33Show/hide
Query:  RYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNE
        +YRGVR+RPWGK+AAEIRDS+RHGARVWLGTF TAEEAA AYDRAA+ MRG  A+LNFP+E
Subjt:  RYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNE

P93822 Ethylene-responsive transcription factor 144.1e-3360.8Show/hide
Query:  MDEEGKSGNDQGG---EARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSSGPRRQGQSES
        MD+ G+S    GG   + +YRGVR+RPWGK+AAEIRDS +HG RVWLGTF+TAE+AARAYDRAAY+MRG  A+LNFP+EY    G+ SSS       S  
Subjt:  MDEEGKSGNDQGG---EARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSSGPRRQGQSES

Query:  QVIEFECVDDKVLEELLEYEEKRKK
        QV EFE +DD VL+ELLEY E   K
Subjt:  QVIEFECVDDKVLEELLEYEEKRKK

Q9LSX0 Ethylene-responsive transcription factor ERF0961.9e-3058.91Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSS-------SSSGPRRQG
        MD+ G+    + G  +YRGVR+RPWGK+AAEIRDS +HG RVWLGTF+TAEEAARAYD+AAY+MRG  A+LNFP+EY    G S       SSS      
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSS-------SSSGPRRQG

Query:  QSESQVIEFECVDDKVLEELLEYEEKRKK
         S  QV EFE +DD VLEELLE  EK  K
Subjt:  QSESQVIEFECVDDKVLEELLEYEEKRKK

Q9LTC5 Ethylene-responsive transcription factor ERF0981.2e-3256.83Show/hide
Query:  MDEEGKSGNDQG---GEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEY----------PSLGGSSSSS
        M+   +S N+Q     +AR+RGVR+RPWGKFAAEIRD SR+GAR+WLGTF TAEEAARAYDRAA+ +RGHLA+LNFPNEY          P    SSSSS
Subjt:  MDEEGKSGNDQG---GEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEY----------PSLGGSSSSS

Query:  GPRRQG-----QSESQVIEFECVDDKVLEELLEYEEKRK
                   Q++ +V EFE +DDKVLEELL+ EE+++
Subjt:  GPRRQG-----QSESQVIEFECVDDKVLEELLEYEEKRK

Q9LTC6 Ethylene-responsive transcription factor ERF0956.0e-3264.41Show/hide
Query:  EARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSL----GGS------SSSSGPRRQGQSES--QVIE
        E +YRGVRKRPWGK+AAEIRDS+RHGARVWLGTFNTAE+AARAYDRAA+ MRG  A+LNFP+EY  +     GS      SSSSG R  G  +   +VIE
Subjt:  EARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSL----GGS------SSSSGPRRQGQSES--QVIE

Query:  FECVDDKVLEELLEYEEK
        FE +DD +LEELL+Y E+
Subjt:  FECVDDKVLEELLEYEEK

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 142.9e-3460.8Show/hide
Query:  MDEEGKSGNDQGG---EARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSSGPRRQGQSES
        MD+ G+S    GG   + +YRGVR+RPWGK+AAEIRDS +HG RVWLGTF+TAE+AARAYDRAAY+MRG  A+LNFP+EY    G+ SSS       S  
Subjt:  MDEEGKSGNDQGG---EARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSSGPRRQGQSES

Query:  QVIEFECVDDKVLEELLEYEEKRKK
        QV EFE +DD VL+ELLEY E   K
Subjt:  QVIEFECVDDKVLEELLEYEEKRKK

AT2G31230.1 ethylene-responsive element binding factor 152.0e-2270.67Show/hide
Query:  DEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNE
        +EE K G D+  E  YRGVRKRPWGKFAAEIRDS+R+G RVWLGTF+ AEEAA AYD+AA+A +G LA LNFP E
Subjt:  DEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNE

AT3G23220.1 Integrase-type DNA-binding superfamily protein4.2e-3364.41Show/hide
Query:  EARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSL----GGS------SSSSGPRRQGQSES--QVIE
        E +YRGVRKRPWGK+AAEIRDS+RHGARVWLGTFNTAE+AARAYDRAA+ MRG  A+LNFP+EY  +     GS      SSSSG R  G  +   +VIE
Subjt:  EARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSL----GGS------SSSSGPRRQGQSES--QVIE

Query:  FECVDDKVLEELLEYEEK
        FE +DD +LEELL+Y E+
Subjt:  FECVDDKVLEELLEYEEK

AT3G23230.1 Integrase-type DNA-binding superfamily protein8.5e-3456.83Show/hide
Query:  MDEEGKSGNDQG---GEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEY----------PSLGGSSSSS
        M+   +S N+Q     +AR+RGVR+RPWGKFAAEIRD SR+GAR+WLGTF TAEEAARAYDRAA+ +RGHLA+LNFPNEY          P    SSSSS
Subjt:  MDEEGKSGNDQG---GEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEY----------PSLGGSSSSS

Query:  GPRRQG-----QSESQVIEFECVDDKVLEELLEYEEKRK
                   Q++ +V EFE +DDKVLEELL+ EE+++
Subjt:  GPRRQG-----QSESQVIEFECVDDKVLEELLEYEEKRK

AT5G43410.1 Integrase-type DNA-binding superfamily protein1.4e-3158.91Show/hide
Query:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSS-------SSSGPRRQG
        MD+ G+    + G  +YRGVR+RPWGK+AAEIRDS +HG RVWLGTF+TAEEAARAYD+AAY+MRG  A+LNFP+EY    G S       SSS      
Subjt:  MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSS-------SSSGPRRQG

Query:  QSESQVIEFECVDDKVLEELLEYEEKRKK
         S  QV EFE +DD VLEELLE  EK  K
Subjt:  QSESQVIEFECVDDKVLEELLEYEEKRKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGGAAGGGAAGTCTGGCAATGATCAAGGCGGCGAGGCTCGATACCGCGGTGTTCGGAAGCGTCCGTGGGGGAAATTTGCAGCGGAGATTCGAGATTCGTCGAG
GCACGGTGCTCGGGTTTGGCTCGGAACTTTCAACACGGCAGAGGAGGCAGCTCGGGCTTACGACCGAGCTGCCTATGCCATGCGTGGTCATTTGGCTGTCCTGAATTTTC
CAAATGAGTATCCTTCTCTTGGTGGTAGCTCTTCTTCTTCTGGTCCTAGGCGCCAAGGCCAGAGTGAAAGCCAAGTGATTGAATTTGAATGTGTTGATGATAAGGTGCTG
GAAGAGCTTCTTGAGTATGAGGAGAAAAGGAAGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
GGACCATGCAAAATGGACGAGGAAGGGAAGTCTGGCAATGATCAAGGCGGCGAGGCTCGATACCGCGGTGTTCGGAAGCGTCCGTGGGGGAAATTTGCAGCGGAGATTCG
AGATTCGTCGAGGCACGGTGCTCGGGTTTGGCTCGGAACTTTCAACACGGCAGAGGAGGCAGCTCGGGCTTACGACCGAGCTGCCTATGCCATGCGTGGTCATTTGGCTG
TCCTGAATTTTCCAAATGAGTATCCTTCTCTTGGTGGTAGCTCTTCTTCTTCTGGTCCTAGGCGCCAAGGCCAGAGTGAAAGCCAAGTGATTGAATTTGAATGTGTTGAT
GATAAGGTGCTGGAAGAGCTTCTTGAGTATGAGGAGAAAAGGAAGAAGAAGTGAAATTCAAAAGCACTTGATATAAAAGTGCTTTTCAGTGTGGAATGAAAAAAATATGG
TAACCTAGCTATTTGGGGATTTGTCTATCAATAATTTTGTGTTGTATTTTCCCCAATTGTGTTGGTCTATATAATATGGAGGTTTTAACCTTAATTAACTAATTTTGTTG
TTTTCCCCCCTCT
Protein sequenceShow/hide protein sequence
MDEEGKSGNDQGGEARYRGVRKRPWGKFAAEIRDSSRHGARVWLGTFNTAEEAARAYDRAAYAMRGHLAVLNFPNEYPSLGGSSSSSGPRRQGQSESQVIEFECVDDKVL
EELLEYEEKRKKK