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Tan0005293 (gene) of Snake gourd v1 genome

Gene IDTan0005293
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG06:3069202..3073466
RNA-Seq ExpressionTan0005293
SyntenyTan0005293
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593392.1 hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2657.25Show/hide
Query:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSLPVFFVFQHFS
        MA  SLSTS++LYH S++  A AIA+PLFSSFHA PEI FSPLH RRSSL LS+NPCAKSAVC+AAVRPPPDSDPPP+EDPIRL+G+ +     +F  F 
Subjt:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSLPVFFVFQHFS

Query:  QNLETEYGFSLLCYSGCPSSSGLLHWTDKID
          +  +  F++L +        L  WT  +D
Subjt:  QNLETEYGFSLLCYSGCPSSSGLLHWTDKID

XP_022959618.1 uncharacterized protein LOC111460643 isoform X2 [Cucurbita moschata]5.8e-2668.93Show/hide
Query:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEG--------YYSLPV
        MA  SLSTS++LYH S++  A AIA+PLFSSFHA PEI FSPLH RRSSL LS+NP AKSAVC+AAVRPPPDSDPPP+EDPIRL+G        Y+ +P+
Subjt:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEG--------YYSLPV

Query:  FFV
        FFV
Subjt:  FFV

XP_023004358.1 uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima]9.0e-2758.02Show/hide
Query:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSLPVFFVFQHFS
        MA+ SLSTS++LYH S++  A AIA+PLFSSFHARPEI FSPLH RRSSL LS NPCAKSAVC+AAVRPPPDSDPPP+EDPIRL+G+ +     +F  F 
Subjt:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSLPVFFVFQHFS

Query:  QNLETEYGFSLLCYSGCPSSSGLLHWTDKID
          +  +  F++L +        L  WT  +D
Subjt:  QNLETEYGFSLLCYSGCPSSSGLLHWTDKID

XP_023004359.1 uncharacterized protein LOC111497700 isoform X2 [Cucurbita maxima]1.5e-2669.9Show/hide
Query:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEG--------YYSLPV
        MA+ SLSTS++LYH S++  A AIA+PLFSSFHARPEI FSPLH RRSSL LS NPCAKSAVC+AAVRPPPDSDPPP+EDPIRL+G        Y  + +
Subjt:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEG--------YYSLPV

Query:  FFV
        FFV
Subjt:  FFV

XP_023513765.1 uncharacterized protein LOC111778275 isoform X1 [Cucurbita pepo subsp. pepo]3.4e-2657.25Show/hide
Query:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSLPVFFVFQHFS
        MA+ SLSTS++LYH S++  A AIA+PLFSSFHA PEI FSPLH RRSSL LS+NPCAKSAVC AAVRPPPDSDPPP+EDPIRL+G+ +     +F  F 
Subjt:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSLPVFFVFQHFS

Query:  QNLETEYGFSLLCYSGCPSSSGLLHWTDKID
          +  +  F++L +        L  WT  +D
Subjt:  QNLETEYGFSLLCYSGCPSSSGLLHWTDKID

TrEMBL top hitse value%identityAlignment
A0A5A7UYV9 Uncharacterized protein5.7e-1968.29Show/hide
Query:  SSSLYHSSQSCAS-AIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSL
        S+SL+ SS S A+ +IA+PL S+FH R +ICFSP  RR S LF S+N  AKS VCSAAVRPPPDSDPPPEEDP+RL GYY L
Subjt:  SSSLYHSSQSCAS-AIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSL

A0A6J1H516 uncharacterized protein LOC111460643 isoform X14.1e-2556.49Show/hide
Query:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSLPVFFVFQHFS
        MA  SLSTS++LYH S++  A AIA+PLFSSFHA PEI FSPLH RRSSL LS+NP AKSAVC+AAVRPPPDSDPPP+EDPIRL+G+ +     +F  F 
Subjt:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSLPVFFVFQHFS

Query:  QNLETEYGFSLLCYSGCPSSSGLLHWTDKID
          +  +  F++L +        L  WT  +D
Subjt:  QNLETEYGFSLLCYSGCPSSSGLLHWTDKID

A0A6J1H6G6 uncharacterized protein LOC111460643 isoform X22.8e-2668.93Show/hide
Query:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEG--------YYSLPV
        MA  SLSTS++LYH S++  A AIA+PLFSSFHA PEI FSPLH RRSSL LS+NP AKSAVC+AAVRPPPDSDPPP+EDPIRL+G        Y+ +P+
Subjt:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEG--------YYSLPV

Query:  FFV
        FFV
Subjt:  FFV

A0A6J1KW20 uncharacterized protein LOC111497700 isoform X27.4e-2769.9Show/hide
Query:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEG--------YYSLPV
        MA+ SLSTS++LYH S++  A AIA+PLFSSFHARPEI FSPLH RRSSL LS NPCAKSAVC+AAVRPPPDSDPPP+EDPIRL+G        Y  + +
Subjt:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEG--------YYSLPV

Query:  FFV
        FFV
Subjt:  FFV

A0A6J1KZ93 uncharacterized protein LOC111497700 isoform X14.4e-2758.02Show/hide
Query:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSLPVFFVFQHFS
        MA+ SLSTS++LYH S++  A AIA+PLFSSFHARPEI FSPLH RRSSL LS NPCAKSAVC+AAVRPPPDSDPPP+EDPIRL+G+ +     +F  F 
Subjt:  MATFSLSTSSSLYHSSQS-CASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSLPVFFVFQHFS

Query:  QNLETEYGFSLLCYSGCPSSSGLLHWTDKID
          +  +  F++L +        L  WT  +D
Subjt:  QNLETEYGFSLLCYSGCPSSSGLLHWTDKID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACGTTCTCTCTCTCTACTTCAAGCTCTCTCTACCATTCTTCCCAGTCTTGCGCCTCTGCAATCGCCGTTCCTCTCTTCTCAAGCTTTCATGCTCGGCCGGAAAT
TTGCTTCTCTCCGCTTCATCGCCGCCGTTCATCTCTCTTTCTCTCCACCAATCCTTGTGCTAAATCCGCGGTTTGCAGCGCAGCAGTACGGCCGCCACCGGACTCTGATC
CGCCTCCCGAGGAGGATCCGATTCGTCTAGAAGGTTACTATTCTTTGCCTGTGTTTTTCGTTTTCCAGCATTTTTCTCAAAATTTGGAGACAGAGTACGGATTTTCTTTG
CTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGACGGACAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTGTGTTTTGGTGCCTTGTC
TTTCTTTGATAGGGATTTGCTCGATGGACGTATTAGAATGTCTACGAGATTTCCAGTTGAGATATTTGGAGTCATTGGGTTACTTGCAACATTAGATGATGGGAGATACG
ATTGGTTTGTGCGATACATCATTATTTCCGTCGGGATCAAAAGTTATCAAGAGCCGTCCACGTGTACAACGACATTGGAATGGTGGGACCCATCTCTCGTGTCTTGTGCC
GACGTGTCGGACAGTCGGAGGTTGAAACTTTTATTAGCCACTGTTGGGACGACAAGTCGACAACAAACCCAAAAGATCCATTTCACTCTCTCTGCTTCTTCTTTCTCTGT
CTTCTTCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACGTTCTCTCTCTCTACTTCAAGCTCTCTCTACCATTCTTCCCAGTCTTGCGCCTCTGCAATCGCCGTTCCTCTCTTCTCAAGCTTTCATGCTCGGCCGGAAAT
TTGCTTCTCTCCGCTTCATCGCCGCCGTTCATCTCTCTTTCTCTCCACCAATCCTTGTGCTAAATCCGCGGTTTGCAGCGCAGCAGTACGGCCGCCACCGGACTCTGATC
CGCCTCCCGAGGAGGATCCGATTCGTCTAGAAGGTTACTATTCTTTGCCTGTGTTTTTCGTTTTCCAGCATTTTTCTCAAAATTTGGAGACAGAGTACGGATTTTCTTTG
CTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGACGGACAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTGTGTTTTGGTGCCTTGTC
TTTCTTTGATAGGGATTTGCTCGATGGACGTATTAGAATGTCTACGAGATTTCCAGTTGAGATATTTGGAGTCATTGGGTTACTTGCAACATTAGATGATGGGAGATACG
ATTGGTTTGTGCGATACATCATTATTTCCGTCGGGATCAAAAGTTATCAAGAGCCGTCCACGTGTACAACGACATTGGAATGGTGGGACCCATCTCTCGTGTCTTGTGCC
GACGTGTCGGACAGTCGGAGGTTGAAACTTTTATTAGCCACTGTTGGGACGACAAGTCGACAACAAACCCAAAAGATCCATTTCACTCTCTCTGCTTCTTCTTTCTCTGT
CTTCTTCCTTTGA
Protein sequenceShow/hide protein sequence
MATFSLSTSSSLYHSSQSCASAIAVPLFSSFHARPEICFSPLHRRRSSLFLSTNPCAKSAVCSAAVRPPPDSDPPPEEDPIRLEGYYSLPVFFVFQHFSQNLETEYGFSL
LCYSGCPSSSGLLHWTDKIDLIRALDLDDSLCFGALSFFDRDLLDGRIRMSTRFPVEIFGVIGLLATLDDGRYDWFVRYIIISVGIKSYQEPSTCTTTLEWWDPSLVSCA
DVSDSRRLKLLLATVGTTSRQQTQKIHFTLSASSFSVFFL