; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005298 (gene) of Snake gourd v1 genome

Gene IDTan0005298
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionextensin-like
Genome locationLG11:19828187..19830247
RNA-Seq ExpressionTan0005298
SyntenyTan0005298
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601837.1 hypothetical protein SDJN03_07070, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4380.88Show/hide
Query:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSP
        MLP  SLLFL  LLLISPSS++AA  RRLDD     TPADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDVVIYYSPPPP KK+ KN +C PPPP+P
Subjt:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSP

Query:  SFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG
        +FMYITGPPGDLYPIDQ+YNAA RRLVSAA+SAVVG
Subjt:  SFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG

KAG7032543.1 hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-4380.88Show/hide
Query:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSP
        MLP  SLLFL  LLLISPSS++AA  RRLDD     TPADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDVVIYYSPPPP KK+ KN +C PPPP+P
Subjt:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSP

Query:  SFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG
        +FMYITGPPGDLYPIDQ+YNAA RRLVSAA+SAVVG
Subjt:  SFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG

XP_008467156.1 PREDICTED: extensin-like [Cucumis melo]2.6e-4583.82Show/hide
Query:  MLPLKSLLFLNFLLLISPSST-AAATARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPS
        MLPLK LLFLNFLLLISPSS   +AT RRLDDT   TTP DP VKCAPCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPPKKKEPKN NC PPPPS
Subjt:  MLPLKSLLFLNFLLLISPSST-AAATARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPS

Query:  PSFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVV
        PSFMYITGPPGDLYPIDQNYNAA RR  +AA+  VV
Subjt:  PSFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVV

XP_022989990.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]2.0e-4582.35Show/hide
Query:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSP
        MLP  SLLFL  LLLISPSS++AA  RRLDDT V  TPADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDVV+YYSPPPP KK+ KN +C PPPPSP
Subjt:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSP

Query:  SFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG
        +FMYITGPPGDLYPIDQNYNAA RRLVSAA+SAV+G
Subjt:  SFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG

XP_023520933.1 extensin [Cucurbita pepo subsp. pepo]6.4e-4480.29Show/hide
Query:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS--PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPS
        MLP  SLLFL  LLLISPSS++AA  RRLDD     TP DPTVKC+PCEQNPPS  PPPPVYPSPPPPSPPPPDVVIYYSPPPP KK+ KN +C PPPPS
Subjt:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS--PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPS

Query:  PSFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG
        P+FMYITGPPGDLYPIDQNYNAA RRLVSAA+SAV+G
Subjt:  PSFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG

TrEMBL top hitse value%identityAlignment
A0A0A0KPJ1 Uncharacterized protein2.9e-4280.29Show/hide
Query:  MLPLKSLLFLNFLLLISPSST-AAATARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPS
        MLPLK LLFLNFLLLISPSS   + T RRLDDT   TTP DP VKCAPCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPPKKKEPK+ NC PPPPS
Subjt:  MLPLKSLLFLNFLLLISPSST-AAATARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPS

Query:  PSFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG
        PSFMYITGPPGDLYPIDQ YNAA RR    +++ VVG
Subjt:  PSFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG

A0A1S3CT22 extensin-like1.3e-4583.82Show/hide
Query:  MLPLKSLLFLNFLLLISPSST-AAATARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPS
        MLPLK LLFLNFLLLISPSS   +AT RRLDDT   TTP DP VKCAPCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPPKKKEPKN NC PPPPS
Subjt:  MLPLKSLLFLNFLLLISPSST-AAATARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPS

Query:  PSFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVV
        PSFMYITGPPGDLYPIDQNYNAA RR  +AA+  VV
Subjt:  PSFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVV

A0A6J1DDL2 acrosin3.8e-4277.7Show/hide
Query:  MLPLKSLLFLNFLLLISPSSTAAAT--ARRLDDT-AVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPP
        MLPLKSLLFLN LLLISPS+TAAA+  AR LD+  AVP+T  DPTVKCAPC+QNPPS PPPP+YPSPPPPSPPPPDV+ YYSPPPPKK +  N NCPPPP
Subjt:  MLPLKSLLFLNFLLLISPSSTAAAT--ARRLDDT-AVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPP

Query:  PSPSFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG
          PSF YITGPPGDLYPIDQ+YNAA R L SAA++AVVG
Subjt:  PSPSFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG

A0A6J1GMY1 extensin4.5e-4380.15Show/hide
Query:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSP
        MLP  SLLFL  LLLISPSS++AA  RRLDD     TPADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDVVIYYSPPPP KK+ KN +C PPPP+P
Subjt:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSP

Query:  SFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG
        +FMYITGPPGDLYPIDQ+YNAA RRLVS A+SAVVG
Subjt:  SFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG

A0A6J1JNW0 leucine-rich repeat extensin-like protein 39.7e-4682.35Show/hide
Query:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSP
        MLP  SLLFL  LLLISPSS++AA  RRLDDT V  TPADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDVV+YYSPPPP KK+ KN +C PPPPSP
Subjt:  MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSP

Query:  SFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG
        +FMYITGPPGDLYPIDQNYNAA RRLVSAA+SAV+G
Subjt:  SFMYITGPPGDLYPIDQNYNAACRRLVSAASSAVVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein2.3e-0752.38Show/hide
Query:  ADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSPSFMYI-TGPPGDLYPIDQNYNAA
        A+  V C PC QN P PPP   P    PSPPPP      SPPPPKK     +  PPPPP P   Y+ T PPGDLYPI+  Y AA
Subjt:  ADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSPSFMYI-TGPPGDLYPIDQNYNAA

AT1G23040.1 hydroxyproline-rich glycoprotein family protein2.4e-1250.43Show/hide
Query:  SLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAP-CEQNPPSPPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSPSFMYI
        +LL    L+  S SS A+  AR+LD+        DP +KC+P C QNPP P PP  PSPPPP+ PPP  +    PPPP KK   ++ CPPPPP+ +F+YI
Subjt:  SLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAP-CEQNPPSPPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSPSFMYI

Query:  TGPPGDLYPIDQNYNAA
        TGPPG+LYP+D+ + AA
Subjt:  TGPPGDLYPIDQNYNAA

AT1G70990.1 proline-rich family protein1.5e-1144.92Show/hide
Query:  LKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSPSFMY
        L +++FL F ++I+ S   ++T R+L++        DP +KC PC QN P       PSPPPPSPPPP       PPP     PK + CPPPP   +++Y
Subjt:  LKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSPSFMY

Query:  ITGPPGDLYPIDQNYNAA
        +TGPPG+LYPIDQ + AA
Subjt:  ITGPPGDLYPIDQNYNAA

AT4G13340.1 Leucine-rich repeat (LRR) family protein1.1e-0445.88Show/hide
Query:  PTTPADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPP-----------PSPSFMYITGPP
        P  P  P V   P    PP PPPPVY SPPPPSPPPP   +Y  PPPP    P     PPPP           P+P+ +Y T PP
Subjt:  PTTPADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPP-----------PSPSFMYITGPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTCTCAAATCTCTCCTCTTTCTCAACTTCCTCCTCCTAATTTCTCCCTCCTCCACCGCCGCCGCCACCGCTCGCCGTCTCGACGACACCGCCGTCCCGACAAC
CCCCGCCGACCCCACCGTCAAGTGCGCCCCATGCGAACAAAACCCCCCATCTCCACCGCCGCCGGTTTACCCATCTCCACCGCCGCCGTCTCCTCCACCGCCGGACGTCG
TCATCTACTACTCTCCTCCACCCCCCAAGAAGAAGGAGCCCAAGAACACCAACTGCCCGCCGCCGCCGCCGTCTCCCTCTTTCATGTACATAACCGGTCCTCCCGGCGAC
CTCTATCCCATCGATCAGAATTATAACGCCGCCTGCCGGAGACTCGTCTCCGCCGCGTCCTCCGCCGTGGTTGGGAGTGACGATTATGGTGAGTCTGGCCAAAAACGAGT
GGAGGGCAAAAGAGTAAATTCGGCATGTGGGCCTGATGATTATGGTGATGACACGCGTCGTGGTTCAAATACCGAGGTGGAATTTGCGTATTGTACTTTTAAAATGGGGA
GGCGATCCCGAGCCATTGGATCGGGTGTCAGAGATTTTGAGATGCGATCAGATCAGGTTTTCCGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCTCTCAAATCTCTCCTCTTTCTCAACTTCCTCCTCCTAATTTCTCCCTCCTCCACCGCCGCCGCCACCGCTCGCCGTCTCGACGACACCGCCGTCCCGACAAC
CCCCGCCGACCCCACCGTCAAGTGCGCCCCATGCGAACAAAACCCCCCATCTCCACCGCCGCCGGTTTACCCATCTCCACCGCCGCCGTCTCCTCCACCGCCGGACGTCG
TCATCTACTACTCTCCTCCACCCCCCAAGAAGAAGGAGCCCAAGAACACCAACTGCCCGCCGCCGCCGCCGTCTCCCTCTTTCATGTACATAACCGGTCCTCCCGGCGAC
CTCTATCCCATCGATCAGAATTATAACGCCGCCTGCCGGAGACTCGTCTCCGCCGCGTCCTCCGCCGTGGTTGGGAGTGACGATTATGGTGAGTCTGGCCAAAAACGAGT
GGAGGGCAAAAGAGTAAATTCGGCATGTGGGCCTGATGATTATGGTGATGACACGCGTCGTGGTTCAAATACCGAGGTGGAATTTGCGTATTGTACTTTTAAAATGGGGA
GGCGATCCCGAGCCATTGGATCGGGTGTCAGAGATTTTGAGATGCGATCAGATCAGGTTTTCCGAGGATGA
Protein sequenceShow/hide protein sequence
MLPLKSLLFLNFLLLISPSSTAAATARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVVIYYSPPPPKKKEPKNTNCPPPPPSPSFMYITGPPGD
LYPIDQNYNAACRRLVSAASSAVVGSDDYGESGQKRVEGKRVNSACGPDDYGDDTRRGSNTEVEFAYCTFKMGRRSRAIGSGVRDFEMRSDQVFRG