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Tan0005312 (gene) of Snake gourd v1 genome

Gene IDTan0005312
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSerine-rich protein-related
Genome locationLG09:67011714..67012252
RNA-Seq ExpressionTan0005312
SyntenyTan0005312
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022921799.1 uncharacterized protein LOC111429944 [Cucurbita moschata]1.1e-3776.79Show/hide
Query:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRAL--QINKPSANDLQRRRNFHPRPSRFC
        MA+KSGS+N KLQ I GSRKCLCSPT HPGSFRCS HRNRRKVSAR+S+SSIAAIT+AQL+L M AK NALR+   QI  PS+ DLQRRRNF P+PSRFC
Subjt:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRAL--QINKPSANDLQRRRNFHPRPSRFC

Query:  LMNDHGTGLAFS
        LMN+HGTGLA S
Subjt:  LMNDHGTGLAFS

XP_022927032.1 uncharacterized protein LOC111433980 [Cucurbita moschata]2.5e-3978.57Show/hide
Query:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC
        MATKS S NSKLQ +  SRKCLCSPT HPGSFRCS+HRNRRK SAR+S+SSI AITSAQLEL +FAK NA+RA  L I +PS+NDLQRRRNFHPRPSRFC
Subjt:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC

Query:  LMNDHGTGLAFS
        LMN HGTGLA S
Subjt:  LMNDHGTGLAFS

XP_023003805.1 uncharacterized protein LOC111497277 [Cucurbita maxima]1.3e-3878.57Show/hide
Query:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC
        MATKS SANSKLQ +  SRKCLCSPT HPGSFRCS+HRNRRK SAR+S+SSI+AITSAQLEL +FAK NA+RA  L I +PS+NDLQRRRNF PRPSRFC
Subjt:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC

Query:  LMNDHGTGLAFS
        LMN HGTGLA S
Subjt:  LMNDHGTGLAFS

XP_023515429.1 uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo]3.7e-3877.68Show/hide
Query:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC
        MA+KSGS+N KLQ I GSRKCLCSPT HPGSFRCS HRNRRKVSAR+S+SSIAAIT+AQL+L M AK NALR+  LQI  PS+ DLQRRRNF P+PSRFC
Subjt:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC

Query:  LMNDHGTGLAFS
        LMN+HGTGLA S
Subjt:  LMNDHGTGLAFS

XP_023530962.1 uncharacterized protein LOC111793349 [Cucurbita pepo subsp. pepo]2.8e-3876.79Show/hide
Query:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC
        MATKS S NSKLQ +  SRKCLCSPT HPGSFRCS+HRNRRK SAR+S+SSI AITSAQLEL ++AK NA+RA  L I +PS+NDLQRRRNFHP PSRFC
Subjt:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC

Query:  LMNDHGTGLAFS
        LMN HGTGLA S
Subjt:  LMNDHGTGLAFS

TrEMBL top hitse value%identityAlignment
A0A0A0LYY6 Uncharacterized protein1.2e-3169.03Show/hide
Query:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKV-SARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRF
        MA+KSGS+  K      SRKCLCSPT HPGSFRCS+HRNR K+ S+R+S+SS++ IT+A LEL   AK NALR+  LQ+ KPS+NDLQRRRNFHPRPSRF
Subjt:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKV-SARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRF

Query:  CLMNDHGTGLAFS
        CLMNDH TGLA S
Subjt:  CLMNDHGTGLAFS

A0A6J1BZD6 uncharacterized protein LOC1110069911.6e-3173.15Show/hide
Query:  SGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFCLMND
        S SA SK       R+CLCSPTNHPGSFRCS+HRNRRKV +  S+SSIAAI++AQL+LAM AK NALRA  LQI KPS ND QRRRNF+PRPSRFCLMN+
Subjt:  SGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFCLMND

Query:  HGTGLAFS
        HGTGLA S
Subjt:  HGTGLAFS

A0A6J1E1K3 uncharacterized protein LOC1114299445.2e-3876.79Show/hide
Query:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRAL--QINKPSANDLQRRRNFHPRPSRFC
        MA+KSGS+N KLQ I GSRKCLCSPT HPGSFRCS HRNRRKVSAR+S+SSIAAIT+AQL+L M AK NALR+   QI  PS+ DLQRRRNF P+PSRFC
Subjt:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRAL--QINKPSANDLQRRRNFHPRPSRFC

Query:  LMNDHGTGLAFS
        LMN+HGTGLA S
Subjt:  LMNDHGTGLAFS

A0A6J1EG01 uncharacterized protein LOC1114339801.2e-3978.57Show/hide
Query:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC
        MATKS S NSKLQ +  SRKCLCSPT HPGSFRCS+HRNRRK SAR+S+SSI AITSAQLEL +FAK NA+RA  L I +PS+NDLQRRRNFHPRPSRFC
Subjt:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC

Query:  LMNDHGTGLAFS
        LMN HGTGLA S
Subjt:  LMNDHGTGLAFS

A0A6J1KSU0 uncharacterized protein LOC1114972776.1e-3978.57Show/hide
Query:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC
        MATKS SANSKLQ +  SRKCLCSPT HPGSFRCS+HRNRRK SAR+S+SSI+AITSAQLEL +FAK NA+RA  L I +PS+NDLQRRRNF PRPSRFC
Subjt:  MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRA--LQINKPSANDLQRRRNFHPRPSRFC

Query:  LMNDHGTGLAFS
        LMN HGTGLA S
Subjt:  LMNDHGTGLAFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52342.1 unknown protein8.2e-0444.74Show/hide
Query:  GIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASS
        G  G +KC+CSP+ HP SF+C YH++  +    +S+SS
Subjt:  GIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASS

AT5G11090.1 serine-rich protein-related2.2e-0939.58Show/hide
Query:  SRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNAL------------RAL-QINKPSANDLQRRRNFHPRPSRFCLM
        SR+C+CSPT HPGSFRCS H+N     A       A+ T+  L +   A  N+L            RAL  + +PS++ L+RR  + PRPSR  +M
Subjt:  SRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNAL------------RAL-QINKPSANDLQRRRNFHPRPSRFCLM

AT5G20370.1 serine-rich protein-related1.2e-0739.22Show/hide
Query:  RKCLCSPTNHPGSFRCSYHRNRRKVSARASASSI---------AAITSAQLELAMFAKVNAL------------RALQIN--KPSANDLQRRRNFHPRPS
        RKCLCSPT HPGSFRCS+HR      ++  ASS              +  L L   A +N+L            R+L  N  KPS+    RR  F PR S
Subjt:  RKCLCSPTNHPGSFRCSYHRNRRKVSARASASSI---------AAITSAQLELAMFAKVNAL------------RALQIN--KPSANDLQRRRNFHPRPS

Query:  RF
        RF
Subjt:  RF

AT5G25280.1 serine-rich protein-related9.4e-0837.5Show/hide
Query:  RKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNAL------------RAL-QINKPSANDLQRRRNFHPRPSRFCLMN
        R+C+CSPT HPGSFRCS H+N     A       A+ T+  L +   A  N+L            RAL  + +PS++ L+RR  + PR SR   M+
Subjt:  RKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNAL------------RAL-QINKPSANDLQRRRNFHPRPSRFCLMN

AT5G25280.2 serine-rich protein-related9.4e-0837.5Show/hide
Query:  RKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNAL------------RAL-QINKPSANDLQRRRNFHPRPSRFCLMN
        R+C+CSPT HPGSFRCS H+N     A       A+ T+  L +   A  N+L            RAL  + +PS++ L+RR  + PR SR   M+
Subjt:  RKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNAL------------RAL-QINKPSANDLQRRRNFHPRPSRFCLMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACAAAATCTGGATCCGCCAATTCGAAATTGCAGGGCATCGCCGGTTCACGCAAATGCCTCTGTTCTCCGACCAACCATCCGGGCTCTTTCCGCTGCAGTTACCA
CCGGAACCGCCGCAAGGTCTCCGCTAGGGCATCGGCATCATCCATTGCTGCCATTACCAGTGCGCAATTGGAGCTTGCGATGTTCGCGAAGGTGAATGCGTTGAGGGCTT
TGCAGATCAACAAGCCGTCCGCTAACGATCTTCAGCGGCGAAGGAATTTTCATCCCAGACCTTCCAGGTTTTGCTTGATGAACGATCATGGAACTGGATTGGCTTTTTCT
TGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAGCCCTCGAATGCCTCAAACTCAATACACCAATCTTCTTCCCCAAGTTTCCCTCGCAAAAAGGAAAATCAGTTCACAAAGTCTTCTCAATAATTCAATTCAATGG
CCACAAAATCTGGATCCGCCAATTCGAAATTGCAGGGCATCGCCGGTTCACGCAAATGCCTCTGTTCTCCGACCAACCATCCGGGCTCTTTCCGCTGCAGTTACCACCGG
AACCGCCGCAAGGTCTCCGCTAGGGCATCGGCATCATCCATTGCTGCCATTACCAGTGCGCAATTGGAGCTTGCGATGTTCGCGAAGGTGAATGCGTTGAGGGCTTTGCA
GATCAACAAGCCGTCCGCTAACGATCTTCAGCGGCGAAGGAATTTTCATCCCAGACCTTCCAGGTTTTGCTTGATGAACGATCATGGAACTGGATTGGCTTTTTCTTGAA
TCGATTCTAGTTTTTTCTAGTTCTGGATCTTCTTTCGATCCTCTTCGCTGAATTTCCTGTCTCGCCTTTTTTTTTTCCAGACGAGTTCGTAGATATAGC
Protein sequenceShow/hide protein sequence
MATKSGSANSKLQGIAGSRKCLCSPTNHPGSFRCSYHRNRRKVSARASASSIAAITSAQLELAMFAKVNALRALQINKPSANDLQRRRNFHPRPSRFCLMNDHGTGLAFS