; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005377 (gene) of Snake gourd v1 genome

Gene IDTan0005377
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiontranslocator protein homolog
Genome locationLG06:33995188..33995696
RNA-Seq ExpressionTan0005377
SyntenyTan0005377
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004307 - TspO/MBR-related protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597521.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.8e-2854.07Show/hide
Query:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY
        SSSP FKSRPESKYTKAKRAL  R L    + P       +FLFGRSS HFPNRNRPIW+A                               GSNALPLY
Subjt:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY

Query:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL
        IAHLSL++VWNPLVLVI A LLAF FCVLD                   DLIKPCLAWTAYL A+TYV I L
Subjt:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL

XP_022945022.1 translocator protein homolog [Cucurbita moschata]3.8e-2854.07Show/hide
Query:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY
        SSSP FKSRPESKYTKAKRAL  R L    + P       +FLFGRSS HFPNRNRPIW+A                               GSNALPLY
Subjt:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY

Query:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL
        IAHLSL++VWNPLVLVI A LLAF FCVLD                   DLIKPCLAWTAYL A+TYV I L
Subjt:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL

XP_022973726.1 translocator protein homolog [Cucurbita maxima]5.9e-2954.07Show/hide
Query:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY
        SSSP FKSRPESKYTKAKRAL  R L    + P       +FLFGRSS HFPNRNRPIW+A                               GSNALPLY
Subjt:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY

Query:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL
        IAHLSL++VWNPLVLVI A LLAF FCVLD+                  DLIKPCLAWTAYL A+TYV I L
Subjt:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL

XP_023540366.1 translocator protein homolog [Cucurbita pepo subsp. pepo]1.7e-2854.07Show/hide
Query:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY
        SSSP FKSRPESKYTKAKRAL  R L    + P       +FLFGRSS HFPNRNRPIW+A                               GSNALPLY
Subjt:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY

Query:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL
        IAHLSL++VWNPLVLVI A LLAF FCVLD                   DLIKPCLAWTAYL A+TYV I L
Subjt:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL

XP_038878873.1 translocator protein homolog [Benincasa hispida]5.0e-2852.02Show/hide
Query:  SSSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWM-------------------------------AGSNALPL
        SSS+P FKSRPESKYTKAKRAL  R L    + P +     +FLFGRS+ HFPNRNRPIW+                                GSNALPL
Subjt:  SSSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWM-------------------------------AGSNALPL

Query:  YIAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL
        YIAHLSL++VWNPLVLVI + +LAF FCVLD+                  DLIKPCLAWTAYLSA+TYV I L
Subjt:  YIAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL

TrEMBL top hitse value%identityAlignment
A0A0A0L583 Uncharacterized protein6.0e-2750.58Show/hide
Query:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWM-------------------------------AGSNALPLY
        SS+P FKSRPESKYTKAKRAL  R L    + P +     +FLFGRSS H+PNRNRPIW+                                GSNALPLY
Subjt:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWM-------------------------------AGSNALPLY

Query:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLD------------------YDLIKPCLAWTAYLSALTYVLIVL
        IAHLSL++VWNPLVLVI + ++AF FCVLD                   DL+KPCLAWTAYLSA+TYV I L
Subjt:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLD------------------YDLIKPCLAWTAYLSALTYVLIVL

A0A1S4DTF2 translocator protein homolog3.5e-2750.58Show/hide
Query:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWM-------------------------------AGSNALPLY
        SS+P FKSRPESKYTKAKRAL  R L    + P +     +FLFGRSS HFPNRNRPIW+                                GSNALPLY
Subjt:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWM-------------------------------AGSNALPLY

Query:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL
        IAHLSL++VW+PLVLVI + ++AF FCVLD+                  DL+KPCLAWTAYLSA+TYV I L
Subjt:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL

A0A5D3CWC4 Translocator protein-like protein3.5e-2750.58Show/hide
Query:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWM-------------------------------AGSNALPLY
        SS+P FKSRPESKYTKAKRAL  R L    + P +     +FLFGRSS HFPNRNRPIW+                                GSNALPLY
Subjt:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWM-------------------------------AGSNALPLY

Query:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL
        IAHLSL++VW+PLVLVI + ++AF FCVLD+                  DL+KPCLAWTAYLSA+TYV I L
Subjt:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL

A0A6J1FZS9 translocator protein homolog1.9e-2854.07Show/hide
Query:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY
        SSSP FKSRPESKYTKAKRAL  R L    + P       +FLFGRSS HFPNRNRPIW+A                               GSNALPLY
Subjt:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY

Query:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL
        IAHLSL++VWNPLVLVI A LLAF FCVLD                   DLIKPCLAWTAYL A+TYV I L
Subjt:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL

A0A6J1ICB9 translocator protein homolog2.9e-2954.07Show/hide
Query:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY
        SSSP FKSRPESKYTKAKRAL  R L    + P       +FLFGRSS HFPNRNRPIW+A                               GSNALPLY
Subjt:  SSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHN---RCVFLFGRSSHHFPNRNRPIWMA-------------------------------GSNALPLY

Query:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL
        IAHLSL++VWNPLVLVI A LLAF FCVLD+                  DLIKPCLAWTAYL A+TYV I L
Subjt:  IAHLSLNIVWNPLVLVIHAFLLAFQFCVLDY------------------DLIKPCLAWTAYLSALTYVLIVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTTCTTCCTCTCCATCCTTCAAATCTAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCGATCCTCGCCGCCTCCGTCGCCATTCCTCTCACCCTCA
CAATCGCTGCGTCTTCCTCTTCGGCCGCTCCTCCCACCATTTCCCCAATCGGAACCGTCCGATTTGGATGGCCGGCTCCAACGCCCTTCCCCTCTACATCGCGCATCTTT
CCCTCAACATCGTTTGGAATCCTCTGGTGCTCGTGATTCACGCCTTTCTCCTTGCGTTTCAGTTCTGCGTTTTGGATTATGATCTGATTAAGCCATGTTTGGCTTGGACT
GCGTATCTCTCTGCTCTTACTTATGTGCTTATTGTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTTCTTCCTCTCCATCCTTCAAATCTAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCGATCCTCGCCGCCTCCGTCGCCATTCCTCTCACCCTCA
CAATCGCTGCGTCTTCCTCTTCGGCCGCTCCTCCCACCATTTCCCCAATCGGAACCGTCCGATTTGGATGGCCGGCTCCAACGCCCTTCCCCTCTACATCGCGCATCTTT
CCCTCAACATCGTTTGGAATCCTCTGGTGCTCGTGATTCACGCCTTTCTCCTTGCGTTTCAGTTCTGCGTTTTGGATTATGATCTGATTAAGCCATGTTTGGCTTGGACT
GCGTATCTCTCTGCTCTTACTTATGTGCTTATTGTTCTTTGA
Protein sequenceShow/hide protein sequence
MPSSSSPSFKSRPESKYTKAKRALDPRRLRRHSSHPHNRCVFLFGRSSHHFPNRNRPIWMAGSNALPLYIAHLSLNIVWNPLVLVIHAFLLAFQFCVLDYDLIKPCLAWT
AYLSALTYVLIVL