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Tan0005378 (gene) of Snake gourd v1 genome

Gene IDTan0005378
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG02:26175676..26176534
RNA-Seq ExpressionTan0005378
SyntenyTan0005378
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571864.1 hypothetical protein SDJN03_28592, partial [Cucurbita argyrosperma subsp. sororia]3.0e-0853.61Show/hide
Query:  MARFAILIALVATLLLSSLSSS-SSSSSSSMIESRKLLATDIPGVPDMNMPPFSPEFGLPPPFASFGPDT------------PDLPFLPPPAIPTIP
        MAR  ILIA VATL LSS +SS SS SSSS++ SRKLLA +   +PDM +PP SP F LPPPF+ FGP+T            P+ PF  PP  P+ P
Subjt:  MARFAILIALVATLLLSSLSSS-SSSSSSSMIESRKLLATDIPGVPDMNMPPFSPEFGLPPPFASFGPDT------------PDLPFLPPPAIPTIP
KGN43761.1 hypothetical protein Csa_017175 [Cucumis sativus]5.1e-1667.82Show/hide
Query:  MARFAILIALVATLLLSSLSSSSSSSSSSMIESRKLLATDIPGVPDMNMPPFSPEFGLPPPFASFGPDT-----PDLPFLPPPAIPT
        MARF +LIA VATLLLSSL SSSSSSSSS+I SRKLLA+D PG+PD N+PPF PEF LPPPF+ FGP+T     P+ PF  PP  P+
Subjt:  MARFAILIALVATLLLSSLSSSSSSSSSSMIESRKLLATDIPGVPDMNMPPFSPEFGLPPPFASFGPDT-----PDLPFLPPPAIPT
TrEMBL top hitse value%identityAlignment
A0A0A0K7G8 Uncharacterized protein2.5e-1667.82Show/hide
Query:  MARFAILIALVATLLLSSLSSSSSSSSSSMIESRKLLATDIPGVPDMNMPPFSPEFGLPPPFASFGPDT-----PDLPFLPPPAIPT
        MARF +LIA VATLLLSSL SSSSSSSSS+I SRKLLA+D PG+PD N+PPF PEF LPPPF+ FGP+T     P+ PF  PP  P+
Subjt:  MARFAILIALVATLLLSSLSSSSSSSSSSMIESRKLLATDIPGVPDMNMPPFSPEFGLPPPFASFGPDT-----PDLPFLPPPAIPT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTTTTGCTATTCTCATTGCTTTAGTTGCAACATTGCTTCTTTCAAGCTTGAGTTCTTCTTCATCTTCTTCTTCTTCTTCCATGATCGAATCTCGAAAGCTTTT
GGCAACAGATATTCCAGGTGTTCCTGATATGAATATGCCTCCATTTAGCCCTGAATTTGGATTGCCTCCTCCATTTGCTTCTTTTGGTCCCGATACTCCTGACCTTCCAT
TTCTCCCTCCACCCGCTATTCCTACTATTCCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAACAAGAAACAAAAGAATCATCATCAATAACTTTAATTGAAGCATTCTCTAAAAAACTTCATCTATAAAATCCCAAATCTACCTTCCCATTTCTCCACAGTATTC
CATCTAACAATGGCTCGTTTTGCTATTCTCATTGCTTTAGTTGCAACATTGCTTCTTTCAAGCTTGAGTTCTTCTTCATCTTCTTCTTCTTCTTCCATGATCGAATCTCG
AAAGCTTTTGGCAACAGATATTCCAGGTGTTCCTGATATGAATATGCCTCCATTTAGCCCTGAATTTGGATTGCCTCCTCCATTTGCTTCTTTTGGTCCCGATACTCCTG
ACCTTCCATTTCTCCCTCCACCCGCTATTCCTACTATTCCTTGAGGAAATTAATTAAACTTCTCTAAAACTTATGATCTCTGTTAGTCTCTTATTATAGTTCTATGTGTG
AGTGATAATTTTGTGGAATTATTATAGCTGAAATGGGAGTGTTTATATGAAGCTCAAGAGGAGGGCTCTCCCTCCTCAAAAGCAGGGTTTGAAAATGCACATTTGATTCA
TTTCATTTGTGTATCTCACTCTTCCTGTTTATTATGGTGTGGTAATAAATATATATATGTTGTTATATGGAATAAGAATTTTATTTTATTGTTCTACCATACAACCTTTG
AACTTGGGTCTCTCCCTTTTGTGGTTCATTATGATCGTATTTTGTTCATTTTCAAACCATATTGTTGTTCATCTAGTGGAGGCGTGGTCTAGGGCGGCGGATCTAGACAT
TTATGTTCGAGCATGTTAGTGAAAATTGTTAATTGCAAGTGTACATATATGGATCAAGTTTTAATATAATGATGAGTGTAAGAGTATCG
Protein sequenceShow/hide protein sequence
MARFAILIALVATLLLSSLSSSSSSSSSSMIESRKLLATDIPGVPDMNMPPFSPEFGLPPPFASFGPDTPDLPFLPPPAIPTIP