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Tan0005382 (gene) of Snake gourd v1 genome

Gene IDTan0005382
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAuxin-responsive family protein
Genome locationLG01:106209263..106209727
RNA-Seq ExpressionTan0005382
SyntenyTan0005382
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024703.1 hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-3057.05Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQ---LEKVSGSNVIIYVG-----------------------
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW+ ER MEE EE EE E+   H++    E+VSGSNVIIYVG                       
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQ---LEKVSGSNVIIYVG-----------------------

Query:  -----------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF
                               +VLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  -----------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF

XP_011653970.1 auxin-responsive protein SAUR78 [Cucumis sativus]6.3e-2754.04Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLE-KVSGSNVIIYVG-------------------------
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW+ E+         +EEDF+  QQ+E KVSGSNVI+YVG                         
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLE-KVSGSNVIIYVG-------------------------

Query:  ----------------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF
                                    +VLFDHLLWMLENSDPNI+FDSNLEELAELYVF
Subjt:  ----------------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF

XP_022135446.1 uncharacterized protein LOC111007398 [Momordica charantia]1.8e-2959.87Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-ISERKMEEKEEEEEEEDFDHHQQLEKVSGSNVIIYVG-------------------------
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW I   KMEE+EEEEE+      QQLEKV GSNVI+YVG                         
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-ISERKMEEKEEEEEEEDFDHHQQLEKVSGSNVIIYVG-------------------------

Query:  -------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF
                           +VLFDHLLWMLENSDPNI+FDSNLEELA+LYVF
Subjt:  -------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF

XP_023536060.1 auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]1.5e-3158.55Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLEKVSGSNVIIYVG--------------------------
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW+ +R MEE EE EE E+ + H+  EKVSGSNVIIYVG                          
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLEKVSGSNVIIYVG--------------------------

Query:  -------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF
                           +VLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  -------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF

XP_038899559.1 auxin-responsive protein SAUR78 [Benincasa hispida]4.4e-2855.84Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLEKVSGSNVIIYVG--------------------------
        MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTREDLW+   KMEE++ E+++      QQLEKVSG++VI+YVG                          
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLEKVSGSNVIIYVG--------------------------

Query:  ---------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF
                             +VLFDHLLWMLENSDPNISFDSNLEELAELYVF
Subjt:  ---------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF

TrEMBL top hitse value%identityAlignment
A0A0A0L464 Uncharacterized protein8.9e-3581.48Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLE-KVSGSNVIIYVGIVLFDHLLWMLENSDPNISFDSNLE
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW+ E+         +EEDF+  QQ+E KVSGSNVI+YVGIVLFDHLLWMLENSDPNI+FDSNLE
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLE-KVSGSNVIIYVGIVLFDHLLWMLENSDPNISFDSNLE

Query:  ELAELYVF
        ELAELYVF
Subjt:  ELAELYVF

A0A1S3B9J9 uncharacterized protein LOC1034876596.4e-2551.53Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLEKVSG-SNVIIYVG-------------------------
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW+      EK+EE+ E+ FD     +KVSG +NV++YVG                         
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLEKVSG-SNVIIYVG-------------------------

Query:  ------------------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF
                                      +VLFDHLLWMLENSDPNI+FDSNLEELAELYVF
Subjt:  ------------------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF

A0A2C9UHW2 Uncharacterized protein4.4e-1853.08Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLEKVSGSN----------------------VIIYVGIVLF
        MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRED+W ++ K+ + E+EE E  F    +   V  S                       +++   +VLF
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLEKVSGSN----------------------VIIYVGIVLF

Query:  DHLLWMLENSDP-NISFDSNLEELAELYVF
        DHLLWMLEN+DP N+S DS LEELA+LYVF
Subjt:  DHLLWMLENSDP-NISFDSNLEELAELYVF

A0A6J1C0S4 uncharacterized protein LOC1110073988.6e-3059.87Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-ISERKMEEKEEEEEEEDFDHHQQLEKVSGSNVIIYVG-------------------------
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW I   KMEE+EEEEE+      QQLEKV GSNVI+YVG                         
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-ISERKMEEKEEEEEEEDFDHHQQLEKVSGSNVIIYVG-------------------------

Query:  -------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF
                           +VLFDHLLWMLENSDPNI+FDSNLEELA+LYVF
Subjt:  -------------------IVLFDHLLWMLENSDPNISFDSNLEELAELYVF

B9RI47 Uncharacterized protein1.8e-1954.2Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEED-----------------FDHH------QQLEKVSGSNV-IIYVGIV
        MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRE+LW      + KEE+EE +                    H       Q+ ++  G  + ++   +V
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEED-----------------FDHH------QQLEKVSGSNV-IIYVGIV

Query:  LFDHLLWMLENSDPNISFDSNLEELAELYVF
        LFDHLLWMLEN+DPN+SFDS LEELAELYVF
Subjt:  LFDHLLWMLENSDPNISFDSNLEELAELYVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12955.1 SAUR-like auxin-responsive protein family2.2e-0633.33Show/hide
Query:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED----------------------------LWISERKME--------EKEEEEEEEDFDHHQQLEKVSG
        ++  +LR+CKS+S QLGRS SY+SLRSKS R D                              IS++ ++        EK++  EE+D +         G
Subjt:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTRED----------------------------LWISERKME--------EKEEEEEEEDFDHHQQLEKVSG

Query:  SNVI-IYVGIVLFDHLLWMLENSDPNISFDSNLEELAELYV
        S +I +   +VLFDHLLWMLE  D  +    +L++ A LY+
Subjt:  SNVI-IYVGIVLFDHLLWMLENSDPNISFDSNLEELAELYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGATAAATTCTCTATTGAGGAAGTGCAAGAGCCTTTCAAGGCAATTGGGAAGGTCCTCTTCTTATAGCAGCTTGAGATCCAAATCAACAAGAGAAGATCTTTG
GATTTCTGAAAGAAAAATGGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGATTTTGATCATCATCAACAACTTGAAAAGGTCAGTGGCAGTAATGTAATTATATATGTTG
GAATTGTTCTGTTTGATCATCTTTTGTGGATGTTGGAAAACTCTGATCCAAATATCAGTTTTGATTCAAATTTGGAGGAATTGGCTGAGCTTTATGTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGATAAATTCTCTATTGAGGAAGTGCAAGAGCCTTTCAAGGCAATTGGGAAGGTCCTCTTCTTATAGCAGCTTGAGATCCAAATCAACAAGAGAAGATCTTTG
GATTTCTGAAAGAAAAATGGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGATTTTGATCATCATCAACAACTTGAAAAGGTCAGTGGCAGTAATGTAATTATATATGTTG
GAATTGTTCTGTTTGATCATCTTTTGTGGATGTTGGAAAACTCTGATCCAAATATCAGTTTTGATTCAAATTTGGAGGAATTGGCTGAGCTTTATGTGTTTTGA
Protein sequenceShow/hide protein sequence
MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWISERKMEEKEEEEEEEDFDHHQQLEKVSGSNVIIYVGIVLFDHLLWMLENSDPNISFDSNLEELAELYVF