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Tan0005386 (gene) of Snake gourd v1 genome

Gene IDTan0005386
OrganismTrichosanthes anguina (Snake gourd v1)
Description50S ribosomal protein L14
Genome locationLG06:9849295..9849928
RNA-Seq ExpressionTan0005386
SyntenyTan0005386
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006811 - ion transport (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0033177 - proton-transporting two-sector ATPase complex, proton-transporting domain (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR000218 - Ribosomal protein L14P
IPR016180 - Ribosomal protein L10e/L16
IPR036853 - Ribosomal protein L14 superfamily
IPR036920 - Ribosomal protein L10e/L16 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4355632.1 hypothetical protein F8388_013049 [Cannabis sativa]2.6e-3363.57Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW-------------KRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVA
        MTRNARR  KIWVRIFPDK +T+RPTET MGSGKGSPEYW                +N+MIQPQT LN+ADNS            A+NRRYAHIGDVIVA
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW-------------KRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVA

Query:  VIKKVVPNTPLERSEVIRVVIVRICKELK
        VIK+ +PNTPL+RSEVIR VIV   KELK
Subjt:  VIKKVVPNTPLERSEVIRVVIVRICKELK

KAF9660677.1 hypothetical protein SADUNF_SadunfPtG0000200 [Salix dunnii]3.7e-3266.94Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRF-----QNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPN
        MTRN RR  KIWVRIFPDK VTLRP+ET MGSGKGSPEYW        + NMIQ QT LN+ADNS             +NRRYAHIGDVI+AVIK+ VPN
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRF-----QNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPN

Query:  TPLERSEVIRVVIVRICKELK
        +PLERSEVIR VIVR  KELK
Subjt:  TPLERSEVIRVVIVRICKELK

KAG6392826.1 hypothetical protein SASPL_147054 [Salvia splendens]3.8e-3772.41Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLER
        MTRNARR  KIWVR+FPDK VT+RP ET MGSGKGSPEYW RF+  MIQPQT LN+ADNS            A+NRRYAHIGDVIVAVIK+VVPNTPLE+
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLER

Query:  SEVIRVVIVRICKELK
        SEV+R VIVR CK+LK
Subjt:  SEVIRVVIVRICKELK

KAG9137039.1 hypothetical protein Leryth_026748 [Lithospermum erythrorhizon]2.0e-3874.14Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLER
        MTRNARR  K+WVRIFPDK VT RP ET MGSGKGSPEYWKRF+N+MIQPQT LN+ADNS            A+NRRYAHIGDVIVAVIK+ VPN PLER
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLER

Query:  SEVIRVVIVRICKELK
        SEV+R VIVR CKELK
Subjt:  SEVIRVVIVRICKELK

KAG9147420.1 hypothetical protein Leryth_027194 [Lithospermum erythrorhizon]2.0e-3874.14Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLER
        MTRNARR  K+WVRIFPDK VT RP ET MGSGKGSPEYWKRF+N+MIQPQT LN+ADNS            A+NRRYAHIGDVIVAVIK+ VPN PLER
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLER

Query:  SEVIRVVIVRICKELK
        SEV+R VIVR CKELK
Subjt:  SEVIRVVIVRICKELK

TrEMBL top hitse value%identityAlignment
A0A444Z5W7 Ribosomal_L16 domain-containing protein8.9e-3262.99Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRF-----------QNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVI
        M+RN RR  +IWVRIFPDKLVT+RPTET MGSGKGSPEYW               N+MIQPQT LN+ADNS            A NRRYA IGD++VAVI
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRF-----------QNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVI

Query:  KKVVPNTPLERSEVIRVVIVRICKELK
        K+ VPN  LERSEVIR VIVR CKELK
Subjt:  KKVVPNTPLERSEVIRVVIVRICKELK

A0A4Y7JZ00 Ribosomal_L16 domain-containing protein (Fragment)7.6e-3153.61Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW-------------------------------------------------KRFQNN-MIQP
        MTR ARR  KIWVRIFPDK VTLRPTET MGSGKGSPEYW                                                 K  +NN MIQP
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW-------------------------------------------------KRFQNN-MIQP

Query:  QTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK
        QTLLN+ADNS            A+NRRYAHIGDVIVAVIK+ VPN PLERSEVIR VIVR CKELK
Subjt:  QTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK

A0A5D3CZ11 50S ribosomal protein L141.7e-3070.64Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRFQNNMIQP-----QTLLNIADNSANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVV
        MTRNARR  KIWVRIFPDK VTLRPTET MGSGKGSPEYW      +++P     + L+ I    A+NRRYAHIGDVIV VIKKVVPNTPLERSEVI  V
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRFQNNMIQP-----QTLLNIADNSANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVV

Query:  IVRICKELK
        I+R CKELK
Subjt:  IVRICKELK

A0A5N6PW93 Ribosomal_L2_C domain-containing protein1.7e-3066.38Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLER
        MTRNARR  KIWVRIFPDK VT+RPTET MGSGKGSPEYW      +++P  +L   DNS            A+NRRYAHIGDVIVAVIK  VPN PLER
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLER

Query:  SEVIRVVIVRICKELK
        SEV+R VIVR CKELK
Subjt:  SEVIRVVIVRICKELK

A0A7J6EBC5 Ribosomal_L16 domain-containing protein1.2e-3363.57Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW-------------KRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVA
        MTRNARR  KIWVRIFPDK +T+RPTET MGSGKGSPEYW                +N+MIQPQT LN+ADNS            A+NRRYAHIGDVIVA
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW-------------KRFQNNMIQPQTLLNIADNS------------ANNRRYAHIGDVIVA

Query:  VIKKVVPNTPLERSEVIRVVIVRICKELK
        VIK+ +PNTPL+RSEVIR VIV   KELK
Subjt:  VIKKVVPNTPLERSEVIRVVIVRICKELK

SwissProt top hitse value%identityAlignment
A4QJF1 50S ribosomal protein L14, chloroplastic2.4e-1871.43Show/hide
Query:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK
        MIQPQT LN+ADNS            A+NRRYAHIGDVIVAVIK+ +PNTPLERSEVIR VIVR CKELK
Subjt:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK

A4QJN5 50S ribosomal protein L14, chloroplastic2.4e-1871.43Show/hide
Query:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK
        MIQPQT LN+ADNS            A+NRRYAHIGDVIVAVIK+ +PNTPLERSEVIR VIVR CKELK
Subjt:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK

A4QKE1 50S ribosomal protein L14, chloroplastic2.4e-1871.43Show/hide
Query:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK
        MIQPQT LN+ADNS            A+NRRYAHIGDVIVAVIK+ +PNTPLERSEVIR VIVR CKELK
Subjt:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK

P56792 50S ribosomal protein L14, chloroplastic2.4e-1871.43Show/hide
Query:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK
        MIQPQT LN+ADNS            A+NRRYAHIGDVIVAVIK+ +PNTPLERSEVIR VIVR CKELK
Subjt:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK

Q8WKP4 50S ribosomal protein L14, chloroplastic1.7e-1975.71Show/hide
Query:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK
        MIQPQTLLN+ADNS            A+NRRYAHIGDVIVAVIKK VPNTPLERSEVIR VIVR CKELK
Subjt:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK

Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 127.5e-0757.5Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW
        MTRN  R   + V IF DK VT+RP ET MG GKG+P +W
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW

ATCG00780.1 ribosomal protein L141.7e-1971.43Show/hide
Query:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK
        MIQPQT LN+ADNS            A+NRRYAHIGDVIVAVIK+ +PNTPLERSEVIR VIVR CKELK
Subjt:  MIQPQTLLNIADNS------------ANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK

ATCG00790.1 ribosomal protein L164.9e-1482.5Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW
        MTRN RR  KIWVRIFPDK VT+RP ET MGSGKGSPEYW
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW

ATMG00080.1 ribosomal protein L162.2e-0652.5Show/hide
Query:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW
        M+   RR+ KIWVR+F D  +T +PTE  MG GKG+P  W
Subjt:  MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACGAAATGCACGACGCGACGAAAAAATATGGGTACGTATATTTCCAGACAAACTCGTTACACTAAGACCCACAGAAACATGTATGGGTTCAGGGAAAGGATCCCC
TGAATATTGGAAAAGATTCCAAAATAATATGATTCAACCTCAAACCCTTTTGAATATAGCAGATAACAGCGCTAATAATCGACGATATGCTCATATTGGTGACGTTATTG
TTGCTGTAATCAAGAAAGTCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGTTGTAATTGTACGTATTTGTAAAGAACTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACACGAAATGCACGACGCGACGAAAAAATATGGGTACGTATATTTCCAGACAAACTCGTTACACTAAGACCCACAGAAACATGTATGGGTTCAGGGAAAGGATCCCC
TGAATATTGGAAAAGATTCCAAAATAATATGATTCAACCTCAAACCCTTTTGAATATAGCAGATAACAGCGCTAATAATCGACGATATGCTCATATTGGTGACGTTATTG
TTGCTGTAATCAAGAAAGTCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGTTGTAATTGTACGTATTTGTAAAGAACTCAAATGA
Protein sequenceShow/hide protein sequence
MTRNARRDEKIWVRIFPDKLVTLRPTETCMGSGKGSPEYWKRFQNNMIQPQTLLNIADNSANNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRVVIVRICKELK