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Tan0005391 (gene) of Snake gourd v1 genome

Gene IDTan0005391
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionB box-type domain-containing protein
Genome locationLG02:2609587..2610319
RNA-Seq ExpressionTan0005391
SyntenyTan0005391
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572307.1 B-box domain protein 30, partial [Cucurbita argyrosperma subsp. sororia]3.5e-4671.94Show/hide
Query:  MCKGVQQEEPQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEILL
        MCKGV QEE Q  V +RR++E A A  GGGGDP PCELCGSRASLYC+AD+AYLC+KCDK VHSANFLALRHVRCLLCNTCQ  T+RYLLGAS  ME++L
Subjt:  MCKGVQQEEPQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEILL

Query:  PRIVRSS-VERNYRNYPCDRDDFDENNSSQVLKTRCLFL
        P IV SS +ERN++NY C  DD+D+ NSSQ+L+T CLFL
Subjt:  PRIVRSS-VERNYRNYPCDRDDFDENNSSQVLKTRCLFL

KAG6589180.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]2.5e-5277.7Show/hide
Query:  MCKGVQQEE-PQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEIL
        MCKGV+QEE PQPAV QRR ++K TA  GGGG+PV CELCGSRAS+YC+AD+AYLC KCDKSVH ANFLA RHVRCLLC+TCQSHTQRYLLGASMEMEIL
Subjt:  MCKGVQQEE-PQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEIL

Query:  LPRIVRSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL
        LP IVRS VERNYRNYPC   DF++N     L TRCLFL
Subjt:  LPRIVRSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL

XP_022989503.1 B-box domain protein 30-like [Cucurbita maxima]1.9e-4777.78Show/hide
Query:  MCKGVQQEE-PQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEIL
        MCKGV+QEE PQ AV QRR ++K TAV GGGG+PV CELCGSRAS+YC+AD+AYLC KCDKSVH ANFLA RHVRCLLC+ CQSH+QRYLLG SMEMEIL
Subjt:  MCKGVQQEE-PQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEIL

Query:  LPRIVRSSVERNYRNYPCDRDDFDEN
        LP IVRS VERNYRNYPC   DF++N
Subjt:  LPRIVRSSVERNYRNYPCDRDDFDEN

XP_023511647.1 B-box domain protein 30-like [Cucurbita pepo subsp. pepo]6.0e-4671.22Show/hide
Query:  MCKGVQQEEPQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEILL
        MCKGV QE+ Q  V +RR++E A A  GGGGDP PCELCGSRASLYC+AD+AYLC+KCDK VHSANFLALRHVRCLLCNTCQ  T+RY+LGAS  ME++L
Subjt:  MCKGVQQEEPQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEILL

Query:  PRIV-RSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL
        P IV  SS+ERN++NY C  DD+D+ NSSQ+LKT CLFL
Subjt:  PRIV-RSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL

XP_023530332.1 B-box domain protein 30-like [Cucurbita pepo subsp. pepo]8.1e-5176.26Show/hide
Query:  MCKGVQQE-EPQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEIL
        MCKGV+QE  PQPAV +RR  +K TA  GGGG+PV CELCGSRAS+YC+AD+AYLC KCDKSVHSANFLA RHVRCLLC+TCQSHTQRYLLGASMEMEIL
Subjt:  MCKGVQQE-EPQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEIL

Query:  LPRIVRSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL
        LP IVR  VERNYRNYPC   DF++N     L TRCLFL
Subjt:  LPRIVRSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL

TrEMBL top hitse value%identityAlignment
A0A0A0K6V9 B box-type domain-containing protein2.5e-4574.1Show/hide
Query:  MCKGVQQEE-PQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEIL
        MCKGV+QEE  Q AV QRR+++   A   GGGDPV CELCGSRASLYCEAD+AYLC KCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASME+ +L
Subjt:  MCKGVQQEE-PQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEIL

Query:  LPRIVRSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL
         P +V  S ERN+ NY CD D F + N SQVLKT CLFL
Subjt:  LPRIVRSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL

A0A1S3C0U6 B-box zinc finger protein 211.4e-4371.01Show/hide
Query:  MCKGVQQEEPQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEILL
        MCKGV+QEE +  V QR +++   A    GGDPV CELCGSRASLYCEAD+AYLC KCDKSVH+ANFLALRHVRCLLCNTCQSHTQRYLLGAS  ME+++
Subjt:  MCKGVQQEEPQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEILL

Query:  PRIVRSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL
        P IV  S ERN+ NY CD D F + N SQVLKT CLFL
Subjt:  PRIVRSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL

A0A5A7TAC0 B-box zinc finger protein 211.4e-4371.01Show/hide
Query:  MCKGVQQEEPQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEILL
        MCKGV+QEE +  V QR +++   A    GGDPV CELCGSRASLYCEAD+AYLC KCDKSVH+ANFLALRHVRCLLCNTCQSHTQRYLLGAS  ME+++
Subjt:  MCKGVQQEEPQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEILL

Query:  PRIVRSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL
        P IV  S ERN+ NY CD D F + N SQVLKT CLFL
Subjt:  PRIVRSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL

A0A6J1GNE7 B-box domain protein 302.4e-4075.89Show/hide
Query:  GGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEILLPRIV-RSSVERNYRNYPCDRDDFDENN
        GGGGDP PCELCGSRASLYC+AD+AYLC+KCDK VHSANFLALRHVRCLLCNTCQ  T+RYLLGAS  ME++LP IV  SS+ERN++NY C  DD+D+ N
Subjt:  GGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEILLPRIV-RSSVERNYRNYPCDRDDFDENN

Query:  SSQVLKTRCLFL
        SSQ+L+T CLFL
Subjt:  SSQVLKTRCLFL

A0A6J1JQG3 B-box domain protein 30-like9.1e-4877.78Show/hide
Query:  MCKGVQQEE-PQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEIL
        MCKGV+QEE PQ AV QRR ++K TAV GGGG+PV CELCGSRAS+YC+AD+AYLC KCDKSVH ANFLA RHVRCLLC+ CQSH+QRYLLG SMEMEIL
Subjt:  MCKGVQQEE-PQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEMEIL

Query:  LPRIVRSSVERNYRNYPCDRDDFDEN
        LP IVRS VERNYRNYPC   DF++N
Subjt:  LPRIVRSSVERNYRNYPCDRDDFDEN

SwissProt top hitse value%identityAlignment
Q1G3I2 B-box domain protein 301.9e-1847.17Show/hide
Query:  MCKGVQQEEPQPA---VVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEME
        MC+G ++EE + +     QR  +E   A       PV CELCG  A++YCEAD A+LCRKCD+ VHSANFLA RH+R ++C TC+  T+R L+G +    
Subjt:  MCKGVQQEEPQPA---VVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEME

Query:  ILLPRI
        ++LP I
Subjt:  ILLPRI

Q39057 Zinc finger protein CONSTANS2.3e-0840.54Show/hide
Query:  EKATAVGGGGGDPV-PCELCGSRA-SLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGA
        +++  +G G  +   PC+ C S A ++YC AD AYLC  CD  VHSAN +A RH R  +C +C+     +L  A
Subjt:  EKATAVGGGGGDPV-PCELCGSRA-SLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGA

Q9C7E8 Zinc finger protein CONSTANS-LIKE 151.8e-0853.06Show/hide
Query:  VPCELCGSR-ASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTC
        VPC+ CG R A L+C AD A LC  CD+ VH+AN L+ +HVR  +C+ C
Subjt:  VPCELCGSR-ASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTC

Q9LJB7 B-box zinc finger protein 321.0e-1151.79Show/hide
Query:  CELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG
        CELCG+ A L+C AD A+LCR CD   H++NFL  RH R ++C  C+S TQ ++ G
Subjt:  CELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG

Q9LRM4 B-box domain protein 318.0e-1746.36Show/hide
Query:  MCKGVQQEEPQPAVVQRRSSEKATAVGGG-------GGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGAS
        MC+G+  EE       RRS       GGG          PV CELC   AS++CEAD A+LCRKCD+ VH ANFLA RHVR +LC +CQ  T+R L+G  
Subjt:  MCKGVQQEEPQPAVVQRRSSEKATAVGGG-------GGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGAS

Query:  MEMEILLPRI
         +  ++LP +
Subjt:  MEMEILLPRI

Arabidopsis top hitse value%identityAlignment
AT3G21150.1 B-box 327.2e-1351.79Show/hide
Query:  CELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG
        CELCG+ A L+C AD A+LCR CD   H++NFL  RH R ++C  C+S TQ ++ G
Subjt:  CELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLG

AT3G21890.1 B-box type zinc finger family protein5.7e-1846.36Show/hide
Query:  MCKGVQQEEPQPAVVQRRSSEKATAVGGG-------GGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGAS
        MC+G+  EE       RRS       GGG          PV CELC   AS++CEAD A+LCRKCD+ VH ANFLA RHVR +LC +CQ  T+R L+G  
Subjt:  MCKGVQQEEPQPAVVQRRSSEKATAVGGG-------GGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGAS

Query:  MEMEILLPRI
         +  ++LP +
Subjt:  MEMEILLPRI

AT4G15248.1 B-box type zinc finger family protein1.3e-1947.17Show/hide
Query:  MCKGVQQEEPQPA---VVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEME
        MC+G ++EE + +     QR  +E   A       PV CELCG  A++YCEAD A+LCRKCD+ VHSANFLA RH+R ++C TC+  T+R L+G +    
Subjt:  MCKGVQQEEPQPA---VVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEME

Query:  ILLPRI
        ++LP I
Subjt:  ILLPRI

AT4G27310.1 B-box type zinc finger family protein2.7e-1258Show/hide
Query:  CELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHT
        C+LC   A +YCE+D A LC  CD  VH ANFL  +H RCLLC+ CQS T
Subjt:  CELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHT

AT5G54470.1 B-box type zinc finger family protein1.1e-1362Show/hide
Query:  CELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHT
        CELC   A +YCE+D A LC  CD  VH ANFL  +H+RCLLC+ CQSHT
Subjt:  CELCGSRASLYCEADDAYLCRKCDKSVHSANFLALRHVRCLLCNTCQSHT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCGCATAATGAAACTTGCTTTTCCATTTTTGTCCTCTTCGGAAACCTTTCTATATATAAACAACTCATTACCCTCAAGCCCTTGCCTTGACAATCAAGCTTCCAA
AAAAAAGAACCCCAAAAATATGTGCAAAGGAGTACAACAAGAAGAACCCCAACCCGCCGTCGTGCAGCGGCGGAGCTCCGAGAAGGCGACGGCGGTGGGAGGAGGCGGAG
GCGATCCAGTACCGTGCGAGCTCTGCGGTTCGAGGGCGTCGCTGTATTGCGAAGCGGACGACGCGTATCTGTGCCGGAAGTGCGACAAGTCGGTTCATAGCGCTAATTTC
TTGGCGCTGCGGCACGTGCGGTGCCTGCTTTGCAACACGTGCCAGAGCCACACGCAGAGATATCTGTTGGGAGCGTCCATGGAAATGGAGATCTTGCTTCCGAGAATTGT
GAGAAGTTCGGTGGAGAGGAATTACCGAAATTATCCCTGTGATCGAGATGATTTTGATGAGAATAATTCCTCCCAAGTTTTGAAAACGCGTTGCCTATTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
TATCAATAAATAAATAAAACCTTATGATTCGCATAATGAAACTTGCTTTTCCATTTTTGTCCTCTTCGGAAACCTTTCTATATATAAACAACTCATTACCCTCAAGCCCT
TGCCTTGACAATCAAGCTTCCAAAAAAAAGAACCCCAAAAATATGTGCAAAGGAGTACAACAAGAAGAACCCCAACCCGCCGTCGTGCAGCGGCGGAGCTCCGAGAAGGC
GACGGCGGTGGGAGGAGGCGGAGGCGATCCAGTACCGTGCGAGCTCTGCGGTTCGAGGGCGTCGCTGTATTGCGAAGCGGACGACGCGTATCTGTGCCGGAAGTGCGACA
AGTCGGTTCATAGCGCTAATTTCTTGGCGCTGCGGCACGTGCGGTGCCTGCTTTGCAACACGTGCCAGAGCCACACGCAGAGATATCTGTTGGGAGCGTCCATGGAAATG
GAGATCTTGCTTCCGAGAATTGTGAGAAGTTCGGTGGAGAGGAATTACCGAAATTATCCCTGTGATCGAGATGATTTTGATGAGAATAATTCCTCCCAAGTTTTGAAAAC
GCGTTGCCTATTTCTTTGATTTCAGGTTGATTTTATTATTATTTATTATTATTATTTTGTTTTTGCATGTTTTCTCTAATTTTATGAGATTTTGTCCTCTCTAGTCTGTA
CCACTCGTTTCTTTTTATTTTTTTTTCCTATGATACTTCCTATTTGGGTTAAATTTCAAGTTTCGTGCATAAA
Protein sequenceShow/hide protein sequence
MIRIMKLAFPFLSSSETFLYINNSLPSSPCLDNQASKKKNPKNMCKGVQQEEPQPAVVQRRSSEKATAVGGGGGDPVPCELCGSRASLYCEADDAYLCRKCDKSVHSANF
LALRHVRCLLCNTCQSHTQRYLLGASMEMEILLPRIVRSSVERNYRNYPCDRDDFDENNSSQVLKTRCLFL