| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6575671.1 30S ribosomal protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 2.9e-104 | 83.72 | Show/hide |
Query: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
MASI SS+++ NLIHSS KP EIPQ LS QFL+PISFH LR+SP R TRLF V+ Q PSSVAARKLYIGNIPRNV NE+LTRI
Subjt: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
Query: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
VE+HGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANA IEKLN+TEVGGRTIKVNITEKPLVNTVDMSLLQA+ESQFIDSPYKVYVGNISST+STETLKN
Subjt: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
Query: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
Subjt: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| XP_022954328.1 30S ribosomal protein 2, chloroplastic-like isoform X1 [Cucurbita moschata] | 3.8e-104 | 83.72 | Show/hide |
Query: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
MASI SS+++ NLIHSS KP EIPQ LS QFL+PISFH LR+SP R TRLF V+ Q PSSVAARKLYIGNIPRNV NE+LTRI
Subjt: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
Query: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
VE+HGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANA IEKLN+TEVGGRTIKVNITEKPLVNTVDMSLLQA+ESQFIDSPYKVYVGNISST+STETLKN
Subjt: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
Query: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
Subjt: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| XP_022954329.1 30S ribosomal protein 2, chloroplastic-like isoform X2 [Cucurbita moschata] | 3.8e-104 | 83.72 | Show/hide |
Query: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
MASI SS+++ NLIHSS KP EIPQ LS QFL+PISFH LR+SP R TRLF V+ Q PSSVAARKLYIGNIPRNV NE+LTRI
Subjt: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
Query: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
VE+HGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANA IEKLN+TEVGGRTIKVNITEKPLVNTVDMSLLQA+ESQFIDSPYKVYVGNISST+STETLKN
Subjt: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
Query: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
Subjt: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| XP_022991923.1 30S ribosomal protein 2, chloroplastic-like [Cucurbita maxima] | 2.9e-104 | 83.72 | Show/hide |
Query: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
MASI SS+++ NLIHSS KP EIPQ LS QFL+PISFH LR+SP R TRLF V+ Q PSSVAARKLYIGNIPRNV NE+LTRI
Subjt: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
Query: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
VE+HGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANA IEKLN+TEVGGRTIKVNITEKPLVNTVDMSLLQA+ESQFIDSPYKVYVGNISST+STETLKN
Subjt: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
Query: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
Subjt: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| XP_038896967.1 30S ribosomal protein 2, chloroplastic [Benincasa hispida] | 1.8e-106 | 87.04 | Show/hide |
Query: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFHR---LRLSPCRPTRLFTPV-TAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAE
MAS SS++S TNLIHSSTKP EIPQ S QFL+PISFH L + RPTRLF AQG SSVA RKLYIGNIPRNVDNE+LTRIV++HGAVEKAE
Subjt: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFHR---LRLSPCRPTRLFTPV-TAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAE
Query: VMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSA
VMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNT+DMSLLQAE+SQFIDSPYKVYVGNISST+STETLKNFFSEKGKVLSA
Subjt: VMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSA
Query: KVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
KVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
Subjt: KVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UYL6 30S ribosomal protein 2 | 3.5e-103 | 83.73 | Show/hide |
Query: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSPCR---PTRLFTPVTA--QGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGA
MASI SS+++ TNLIH+S KP EI Q LS QFL+PISFH LR+SP PTRLF A QG SSVA RKLYIGNIPRNV+NE+LTRIV++HGA
Subjt: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSPCR---PTRLFTPVTA--QGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGA
Query: VEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKG
VEKAEVMYDKYSGRSRRFAFVTMKTV+DANAAIEKLNETEVGGR IKVNITEKP+VNTVD+S+LQAEESQFIDSPYKVYVGNISST+STETLKNFFSEKG
Subjt: VEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKG
Query: KVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
KVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
Subjt: KVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| A0A6J1GQT6 30S ribosomal protein 2, chloroplastic-like isoform X1 | 1.8e-104 | 83.72 | Show/hide |
Query: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
MASI SS+++ NLIHSS KP EIPQ LS QFL+PISFH LR+SP R TRLF V+ Q PSSVAARKLYIGNIPRNV NE+LTRI
Subjt: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
Query: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
VE+HGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANA IEKLN+TEVGGRTIKVNITEKPLVNTVDMSLLQA+ESQFIDSPYKVYVGNISST+STETLKN
Subjt: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
Query: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
Subjt: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| A0A6J1GSN8 30S ribosomal protein 2, chloroplastic-like isoform X2 | 1.8e-104 | 83.72 | Show/hide |
Query: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
MASI SS+++ NLIHSS KP EIPQ LS QFL+PISFH LR+SP R TRLF V+ Q PSSVAARKLYIGNIPRNV NE+LTRI
Subjt: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
Query: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
VE+HGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANA IEKLN+TEVGGRTIKVNITEKPLVNTVDMSLLQA+ESQFIDSPYKVYVGNISST+STETLKN
Subjt: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
Query: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
Subjt: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| A0A6J1H8X7 30S ribosomal protein 2, chloroplastic-like | 5.4e-104 | 85.14 | Show/hide |
Query: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFHR------LRLSPCRPTRLFTPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEK
MASI S+V+S TNLIHSSTKP EI LK +SFHR LRLSP RPTRLF +TAQ SSVA RKLY+GNIPRNVDNE+L RIVEQHGAVEK
Subjt: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFHR------LRLSPCRPTRLFTPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEK
Query: AEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVL
AEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNET+VGGRTIKVNITEKP+VNTVDMSLL+AEESQFIDSP+KVYVGNISST+STETLKNFFSEKGKVL
Subjt: AEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVL
Query: SAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
SAKVSRVPGTSK+SGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
Subjt: SAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| A0A6J1JXN0 30S ribosomal protein 2, chloroplastic-like | 1.4e-104 | 83.72 | Show/hide |
Query: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
MASI SS+++ NLIHSS KP EIPQ LS QFL+PISFH LR+SP R TRLF V+ Q PSSVAARKLYIGNIPRNV NE+LTRI
Subjt: MASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFH----RLRLSP-------CRPTRLF----TPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRI
Query: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
VE+HGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANA IEKLN+TEVGGRTIKVNITEKPLVNTVDMSLLQA+ESQFIDSPYKVYVGNISST+STETLKN
Subjt: VEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKN
Query: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
Subjt: FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P19683 31 kDa ribonucleoprotein, chloroplastic | 2.1e-28 | 41.44 | Show/hide |
Query: KLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNIT----EKPLVNTVDMSLLQAEESQF
KL++GN+P +VD+E L R+ EQ G VE AEV+Y++ + +SR F FVTM TV++A A+E N +V GR + VN E+P +
Subjt: KLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNIT----EKPLVNTVDMSLLQAEESQF
Query: IDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
+ Y++YVGNI I L+ FSE GKV+SA+V T +S G+GFVT +SE E+ AI++ + L+G+ IRVN A
Subjt: IDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| P19684 33 kDa ribonucleoprotein, chloroplastic | 3.4e-31 | 38.59 | Show/hide |
Query: SVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPL--VNTVDMSLLQAEE
SV +LY+GN+P ++ + L+ I + G V E++YD+ + RSR FAFVTM +V++A AI + ++VGGRT+KVN E P V + +++
Subjt: SVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPL--VNTVDMSLLQAEE
Query: SQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
F+DSP+K+YV N+S ++++ L++ F+++ +SAKV + +S G+GF+TFSS E + +A+ + N LEG+P+R+N A
Subjt: SQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| P82277 30S ribosomal protein 2, chloroplastic | 9.2e-69 | 57.85 | Show/hide |
Query: ASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFHRLRLSPCRPTRLFTPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDK
+S S S+ NL+ + N KL + ++R T + ++ AR+LY+GNIPRN++N++L IVE+HGA+E AEVMYDK
Subjt: ASISSSVISATNLIHSSTKPNEIPQKLSKQFLKPISFHRLRLSPCRPTRLFTPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDK
Query: YSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRV
YSGRSRRF FVTMKTV+DANA IEKLN+TE+GGR IKVNITEKPL +D++ QAE+SQF++SPYKVY+GN++ T++ E LK+FFSEKGKVL AKV R
Subjt: YSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRV
Query: PGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
PGTSKS+G+GFV+FSSEEEVEAAI + NN++LEGQ IRVNKA
Subjt: PGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| Q39061 RNA-binding protein CP33, chloroplastic | 2.6e-31 | 36.87 | Show/hide |
Query: KLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPL--VNTVDMSLLQAEESQFID
+LY+GN+P + + +L++I + G V +++YDK + RSR F FVTM ++++A A++ N +++GGRT+KVN E P N V + ++ ++D
Subjt: KLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPL--VNTVDMSLLQAEESQFID
Query: SPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
SP+KVY GN+ ++++ LK+ F ++ VL AKV T +S G+GF++F S E V++A+++ N +EG+ +R+N A
Subjt: SPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| Q8VYM4 30S ribosomal protein 2, chloroplastic | 1.2e-71 | 67.65 | Show/hide |
Query: RLRLSPCRPTRLFTPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKV
R R P T A PSS AAR++YIGNIPR V NE LT++VE+HGAVEK +VMYDKYSGRSRRF F TMK+V+DANA +EKLN V GR IKV
Subjt: RLRLSPCRPTRLFTPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKV
Query: NITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIR
NITEKP+ ++ D+S+LQ+E+S F+DSPYKVYVGN++ T++ E L+N FSEKGKV+SAKVSRVPGTSKS+G+GFVTFSSEE+VEAAI + NN+LLEGQ IR
Subjt: NITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIR
Query: VNKA
VNKA
Subjt: VNKA
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.2e-32 | 41.3 | Show/hide |
Query: PSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEE
P + KLY GN+P NVD+ L +I++ E EV+Y++ +G+SR FAFVTM V+D N I+ L+ TE GR +KVN +KP N +E
Subjt: PSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEE
Query: SQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
+ ++ +K++VGN+S T+++E+L F E G V+ A+V T +S GYGFV +SS+ E+E A+ S + LEG+ IRVN A
Subjt: SQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| AT3G52150.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 8.3e-73 | 67.65 | Show/hide |
Query: RLRLSPCRPTRLFTPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKV
R R P T A PSS AAR++YIGNIPR V NE LT++VE+HGAVEK +VMYDKYSGRSRRF F TMK+V+DANA +EKLN V GR IKV
Subjt: RLRLSPCRPTRLFTPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKV
Query: NITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIR
NITEKP+ ++ D+S+LQ+E+S F+DSPYKVYVGN++ T++ E L+N FSEKGKV+SAKVSRVPGTSKS+G+GFVTFSSEE+VEAAI + NN+LLEGQ IR
Subjt: NITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIR
Query: VNKA
VNKA
Subjt: VNKA
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| AT3G52150.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 8.3e-73 | 67.65 | Show/hide |
Query: RLRLSPCRPTRLFTPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKV
R R P T A PSS AAR++YIGNIPR V NE LT++VE+HGAVEK +VMYDKYSGRSRRF F TMK+V+DANA +EKLN V GR IKV
Subjt: RLRLSPCRPTRLFTPVTAQGPSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKV
Query: NITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIR
NITEKP+ ++ D+S+LQ+E+S F+DSPYKVYVGN++ T++ E L+N FSEKGKV+SAKVSRVPGTSKS+G+GFVTFSSEE+VEAAI + NN+LLEGQ IR
Subjt: NITEKPLVNTVDMSLLQAEESQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIR
Query: VNKA
VNKA
Subjt: VNKA
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| AT3G52380.1 chloroplast RNA-binding protein 33 | 1.9e-32 | 36.87 | Show/hide |
Query: KLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPL--VNTVDMSLLQAEESQFID
+LY+GN+P + + +L++I + G V +++YDK + RSR F FVTM ++++A A++ N +++GGRT+KVN E P N V + ++ ++D
Subjt: KLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPL--VNTVDMSLLQAEESQFID
Query: SPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
SP+KVY GN+ ++++ LK+ F ++ VL AKV T +S G+GF++F S E V++A+++ N +EG+ +R+N A
Subjt: SPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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| AT5G50250.1 chloroplast RNA-binding protein 31B | 2.5e-29 | 38.04 | Show/hide |
Query: PSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEE
P KL++GN+P +VD++ L + EQ G VE +EV+Y++ + +SR F FVTM TV++A A+EK N EV GR + VN +
Subjt: PSSVAARKLYIGNIPRNVDNEDLTRIVEQHGAVEKAEVMYDKYSGRSRRFAFVTMKTVDDANAAIEKLNETEVGGRTIKVNITEKPLVNTVDMSLLQAEE
Query: SQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
+ D+ +++YVGN+ + + L+ FSE GKV+ A+V T +S G+GFV S+E EV AI++ + LEG+ I+VN A
Subjt: SQFIDSPYKVYVGNISSTISTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAISSFNNALLEGQPIRVNKA
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