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Tan0005412 (gene) of Snake gourd v1 genome

Gene IDTan0005412
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranscription termination factor 4
Genome locationLG05:69340786..69342924
RNA-Seq ExpressionTan0005412
SyntenyTan0005412
Gene Ontology termsGO:0090266 - regulation of mitotic cell cycle spindle assembly checkpoint (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
InterPro domainsIPR026182 - Anaphase-promoting complex subunit 15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152491.1 uncharacterized protein LOC101206898 [Cucumis sativus]7.0e-4194.85Show/hide
Query:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWS+R IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSN VVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
XP_008438807.1 PREDICTED: uncharacterized protein LOC103483797 [Cucumis melo]2.8e-4297.94Show/hide
Query:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWS+RTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSN VVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
XP_018813880.1 uncharacterized protein LOC108985877 [Juglans regia]5.2e-3687.76Show/hide
Query:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDI--EAEDDDADNAEESEAEEFEQET
        MLQFPAFMTQYPWS+RTIPTSFLLPSQWPQP +EELLLAMEESDFEEKCNEIRKTNSN VVIGK T DNDKED   +A+DDDADNAEESE EEFEQET
Subjt:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDI--EAEDDDADNAEESEAEEFEQET
XP_022137094.1 uncharacterized protein LOC111008654 [Momordica charantia]1.2e-4095.83Show/hide
Query:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQET
        MLQFPAFMTQYPWS+RTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSN VVIGKM+ADNDKEDIEAEDDDADN EESEAEEFEQET
Subjt:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQET
XP_038894516.1 uncharacterized protein LOC120083062 [Benincasa hispida]6.3e-4296.91Show/hide
Query:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWS+RTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSN+VVIGKM ADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
TrEMBL top hitse value%identityAlignment
A0A0A0LWF0 Uncharacterized protein3.4e-4194.85Show/hide
Query:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWS+R IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSN VVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
A0A1S3AXA5 uncharacterized protein LOC1034837971.4e-4297.94Show/hide
Query:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWS+RTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSN VVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
A0A5A7UJS1 Transcription termination factor 41.4e-4297.94Show/hide
Query:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWS+RTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSN VVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
A0A6J1GSM6 uncharacterized protein LOC1114567621.4e-4297.94Show/hide
Query:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWS+RTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSN VVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
A0A6J1JWJ6 uncharacterized protein LOC1114903241.4e-4297.94Show/hide
Query:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
        MLQFPAFMTQYPWS+RTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSN VVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63135.1 unknown protein4.5e-3070.71Show/hide
Query:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKE--DIEAEDDDADNAEESEAEEFEQETG
        MLQFP  MTQ+P S++TIP S+LLP QWPQPQNEE+LLAMEE++FEEKCNEIRK +    VIGK   +N++E  D EAEDDDADNAEES+ EEFEQETG
Subjt:  MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKE--DIEAEDDDADNAEESEAEEFEQETG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCAGTTTCCGGCTTTCATGACCCAGTACCCATGGTCTTCAAGGACGATTCCGACGTCGTTTCTACTGCCGTCTCAATGGCCCCAACCCCAAAACGAAGAGTTACT
GCTCGCCATGGAAGAGTCTGATTTCGAAGAAAAGTGCAATGAAATCAGGAAGACAAACAGCAACCGGGTGGTCATTGGCAAAATGACTGCTGACAATGATAAAGAAGATA
TAGAGGCAGAAGATGATGACGCTGACAATGCTGAGGAATCTGAGGCTGAAGAATTTGAGCAGGAAACTGGTTAA
mRNA sequenceShow/hide mRNA sequence
CAGAAATAAACCACTTGCCAAACACGGCGTTGGAGATTTTCGTATTCTGCGAGCGAGTCCATTCCTCTCTCTCCAGGTTCGAGCTCCGGCGAGAGAAATGCTGCAGTTTC
CGGCTTTCATGACCCAGTACCCATGGTCTTCAAGGACGATTCCGACGTCGTTTCTACTGCCGTCTCAATGGCCCCAACCCCAAAACGAAGAGTTACTGCTCGCCATGGAA
GAGTCTGATTTCGAAGAAAAGTGCAATGAAATCAGGAAGACAAACAGCAACCGGGTGGTCATTGGCAAAATGACTGCTGACAATGATAAAGAAGATATAGAGGCAGAAGA
TGATGACGCTGACAATGCTGAGGAATCTGAGGCTGAAGAATTTGAGCAGGAAACTGGTTAAAACTTACAACAACTATTCTGCATCTTTGTGTTCTTTCTTGTCTTTAGAA
TCTTCAATTTGCTTGTGTATTACTAAATCGTTTTTTCTTTTTGTTCACTGTACAATCTGTCACTTTGGAAAGCCAGAG
Protein sequenceShow/hide protein sequence
MLQFPAFMTQYPWSSRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKTNSNRVVIGKMTADNDKEDIEAEDDDADNAEESEAEEFEQETG