CuGenDBv2

Gene ID	Tan0005434
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Epidermal patterning factor-like protein
Genome location	LG09:66273240..66273642
RNA-Seq Expression	Tan0005434
Synteny	Tan0005434
Gene Ontology terms	GO:0010052 - guard cell differentiation (biological process) GO:0005576 - extracellular region (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039455 - EPIDERMAL PATTERNING FACTOR-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022933440.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X1 [Cucurbita moschata]

3.4e-41

79.46

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Query:  MALKNSLFLILPLIFLFSLSLSHPT-----SGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLS
        MAL NSLFLILPLI  FSLS+ HPT     SG+EDSKQKEL IGSRPP+CFN+CLNCKPCVAALVISQRHKGDD+NNG  V+SN E+ + PKDDAYYLLS
Subjt:  MALKNSLFLILPLIFLFSLSLSHPT-----SGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLS

Query:  WKCKCKDKYFQP
        WKCKCKDKYFQP
Subjt:  WKCKCKDKYFQP

XP_022933441.1 EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X2 [Cucurbita moschata]

4.8e-43

83.18

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Query:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKC
        MAL NSLFLILPLI  FSLS+ HPTSG+EDSKQKEL IGSRPP+CFN+CLNCKPCVAALVISQRHKGDD+NNG  V+SN E+ + PKDDAYYLLSWKCKC
Subjt:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKC

Query:  KDKYFQP
        KDKYFQP
Subjt:  KDKYFQP

XP_022971966.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita maxima]

5.0e-40

81.31

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Query:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKC
        MAL NSLFLILPLI  FSLS+  PTSG+EDSKQKEL IGSRPP+CFN+CLNCKPCVAALVISQR KG DNNNG  V+SN E+ + PKDDAYYLLSWKCKC
Subjt:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKC

Query:  KDKYFQP
        KDKYFQP
Subjt:  KDKYFQP

XP_023531006.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X1 [Cucurbita pepo subsp. pepo]

3.4e-41

79.46

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Query:  MALKNSLFLILPLIFLFSLSLSHPT-----SGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLS
        MAL NSLFLILPLI  FSLS+ HPT     SG+EDSKQKEL IGSRPP+CFN+CLNCKPCVAALVISQRHKGDD+NNG  V+SN E+ + PKDDAYYLLS
Subjt:  MALKNSLFLILPLIFLFSLSLSHPT-----SGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLS

Query:  WKCKCKDKYFQP
        WKCKCKDKYFQP
Subjt:  WKCKCKDKYFQP

XP_023531007.1 EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita pepo subsp. pepo]

4.8e-43

83.18

Show/hide

Query:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKC
        MAL NSLFLILPLI  FSLS+ HPTSG+EDSKQKEL IGSRPP+CFN+CLNCKPCVAALVISQRHKGDD+NNG  V+SN E+ + PKDDAYYLLSWKCKC
Subjt:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKC

Query:  KDKYFQP
        KDKYFQP
Subjt:  KDKYFQP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CU06 Epidermal patterning factor-like protein

1.9e-37

73.21

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Query:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHK--GDDNNNGVFV---LSNFESPRFPKDDAYYLLS
        MA KNSLFLILP + LFSLSL HPTSG   SK+KELVIGSRPPQCFN+CLNC+PCVAALVISQRHK  GD  N    V    +N E+ R P+DD+YYLLS
Subjt:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHK--GDDNNNGVFV---LSNFESPRFPKDDAYYLLS

Query:  WKCKCKDKYFQP
        WKCKCKDKYFQP
Subjt:  WKCKCKDKYFQP

A0A6J1EZ19 Epidermal patterning factor-like protein

2.3e-43

83.18

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Query:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKC
        MAL NSLFLILPLI  FSLS+ HPTSG+EDSKQKEL IGSRPP+CFN+CLNCKPCVAALVISQRHKGDD+NNG  V+SN E+ + PKDDAYYLLSWKCKC
Subjt:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKC

Query:  KDKYFQP
        KDKYFQP
Subjt:  KDKYFQP

A0A6J1F4W6 Epidermal patterning factor-like protein

1.7e-41

79.46

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Query:  MALKNSLFLILPLIFLFSLSLSHPT-----SGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLS
        MAL NSLFLILPLI  FSLS+ HPT     SG+EDSKQKEL IGSRPP+CFN+CLNCKPCVAALVISQRHKGDD+NNG  V+SN E+ + PKDDAYYLLS
Subjt:  MALKNSLFLILPLIFLFSLSLSHPT-----SGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLS

Query:  WKCKCKDKYFQP
        WKCKCKDKYFQP
Subjt:  WKCKCKDKYFQP

A0A6J1I4N2 Epidermal patterning factor-like protein

2.4e-40

81.31

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Query:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKC
        MAL NSLFLILPLI  FSLS+  PTSG+EDSKQKEL IGSRPP+CFN+CLNCKPCVAALVISQR KG DNNNG  V+SN E+ + PKDDAYYLLSWKCKC
Subjt:  MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKC

Query:  KDKYFQP
        KDKYFQP
Subjt:  KDKYFQP

A0A6J1I8G8 Epidermal patterning factor-like protein

1.7e-38

77.68

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Query:  MALKNSLFLILPLIFLFSLSLSHPTS-----GHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLS
        MAL NSLFLILPLI  FSLS+  PTS     G+EDSKQKEL IGSRPP+CFN+CLNCKPCVAALVISQR KG DNNNG  V+SN E+ + PKDDAYYLLS
Subjt:  MALKNSLFLILPLIFLFSLSLSHPTS-----GHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLS

Query:  WKCKCKDKYFQP
        WKCKCKDKYFQP
Subjt:  WKCKCKDKYFQP

SwissProt top hits

e value

%identity

Alignment

P43212 Polygalacturonase

7.8e-04

43.24

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Query:  HEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQR
        ++   +  +++GSRPP C N+C  C PC A LVI  R
Subjt:  HEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQR

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 8

1.8e-08

33.01

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Query:  SLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALV-ISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKCKDKY
        +LF+      L SL       GH+  + KE V+GS PP C  +C NCKPC+  L  I   H  DD++                 + YY + W C+C+D+ 
Subjt:  SLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALV-ISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKCKDKY

Query:  FQP
        F+P
Subjt:  FQP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 1

1.2e-04

28.33

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Query:  ALKNSLFLILPLIFL---------FSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVA----ALVISQRHKGDDNNNGVFVL-SNFESPRFPK
        A+  S  L+LPLI +         F   +  P S      + +  +GS PP C NRC NC PC+A     L    R    +  +G FV   +  +    +
Subjt:  ALKNSLFLILPLIFL---------FSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVA----ALVISQRHKGDDNNNGVFVL-SNFESPRFPK

Query:  DDAYYLLSWKCKCKDKYFQP
           Y  + WKC C   ++ P
Subjt:  DDAYYLLSWKCKCKDKYFQP

Arabidopsis top hits

e value

%identity

Alignment

AT1G80133.1 unknown protein

1.3e-09

33.01

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Query:  SLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALV-ISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKCKDKY
        +LF+      L SL       GH+  + KE V+GS PP C  +C NCKPC+  L  I   H  DD++                 + YY + W C+C+D+ 
Subjt:  SLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALV-ISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKCKDKY

Query:  FQP
        F+P
Subjt:  FQP

AT5G10310.1 unknown protein

8.5e-06

28.33

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Query:  ALKNSLFLILPLIFL---------FSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVA----ALVISQRHKGDDNNNGVFVL-SNFESPRFPK
        A+  S  L+LPLI +         F   +  P S      + +  +GS PP C NRC NC PC+A     L    R    +  +G FV   +  +    +
Subjt:  ALKNSLFLILPLIFL---------FSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVA----ALVISQRHKGDDNNNGVFVL-SNFESPRFPK

Query:  DDAYYLLSWKCKCKDKYFQP
           Y  + WKC C   ++ P
Subjt:  DDAYYLLSWKCKCKDKYFQP

Sequences

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CDS sequence

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ATGGCTTTAAAAAACTCTCTCTTTCTCATTCTCCCTCTCATATTTTTATTTTCCCTCTCTCTCTCACACCCCACATCAGGGCATGAAGATTCAAAGCAGAAGGAATTGGT
AATTGGGTCAAGGCCACCACAGTGCTTCAACAGGTGCTTAAATTGCAAGCCATGTGTTGCTGCTTTGGTTATTTCTCAGCGCCATAAAGGTGATGATAACAATAATGGTG
TTTTTGTTCTTTCTAATTTTGAGTCTCCTCGATTCCCTAAAGATGATGCCTATTATCTTCTCTCGTGGAAATGCAAGTGTAAAGATAAGTACTTTCAACCTTGA

mRNA sequence

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Protein sequence

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MALKNSLFLILPLIFLFSLSLSHPTSGHEDSKQKELVIGSRPPQCFNRCLNCKPCVAALVISQRHKGDDNNNGVFVLSNFESPRFPKDDAYYLLSWKCKCKDKYFQP

Tan0005434 (gene) of Snake gourd v1 genome