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Tan0005435 (gene) of Snake gourd v1 genome

Gene IDTan0005435
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein PLASTID TRANSCRIPTIONALLY ACTIVE 7
Genome locationLG01:839146..841431
RNA-Seq ExpressionTan0005435
SyntenyTan0005435
Gene Ontology termsGO:0042793 - plastid transcription (biological process)
GO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR038958 - Protein plastid transcriptionally active 7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576638.1 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7, partial [Cucurbita argyrosperma subsp. sororia]1.9e-7891.07Show/hide
Query:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
        MTTPIPT SFASP   RI+ RAGISHGFNFPPRLQV ARKQR+ EG GRRVWRRRKLTKKDDMS +KMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
Subjt:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED

Query:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        NRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
KAG7014690.1 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-8192.26Show/hide
Query:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
        MTTPIPT SFASPL QRI+ RAGISHGFNFPPRLQV ARKQR+ EG GRRVWRRRKLTKKDDMS +KMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
Subjt:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED

Query:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        NRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
XP_022923077.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita moschata]4.5e-8091.07Show/hide
Query:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
        MTTPIPT SFASPL QRI+ RAG+SHGFNFP RLQV ARKQR+ EG GRRVWRRRKLTKKDDMS +KMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
Subjt:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED

Query:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        NRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
XP_022984516.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita maxima]2.7e-8091.07Show/hide
Query:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
        MT+PIPT SFASPL QRI+ RAGISHGFNFPPRLQV ARKQR+ EG GRRVWRRRKLTKKD+MS +KMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
Subjt:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED

Query:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        NRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
XP_023553427.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucurbita pepo subsp. pepo]4.5e-8090.48Show/hide
Query:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
        MTTPIPT SFASPL QRI+ RAGISHGFNFPPRLQ+ ARKQR+ EG GRRVWRRRKLTKKD+MS +KMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
Subjt:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED

Query:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        NRFDFVNEVAAEAK+YVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
TrEMBL top hitse value%identityAlignment
A0A6J1CJC0 protein PLASTID TRANSCRIPTIONALLY ACTIVE 71.6e-7890.42Show/hide
Query:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
        M+TPIPT SF S  + RIE RAGISH FNFPPR +VVARKQR  EGGGRRVWRRRKL KKDDMSHYKMDRIPFLEEQVRKVKEQGKL+TMDIERLLLSED
Subjt:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED

Query:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEF
        NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLKEEF
Subjt:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEF
A0A6J1E559 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X12.2e-8091.07Show/hide
Query:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
        MTTPIPT SFASPL QRI+ RAG+SHGFNFP RLQV ARKQR+ EG GRRVWRRRKLTKKDDMS +KMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
Subjt:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED

Query:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        NRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
A0A6J1E8L1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X21.3e-7789.88Show/hide
Query:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
        MTTPIPT SFASP   RI+ RAG+SHGFNFP RLQV ARKQR+ EG GRRVWRRRKLTKKDDMS +KMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
Subjt:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED

Query:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        NRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
A0A6J1J2D6 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X27.8e-7889.88Show/hide
Query:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
        MT+PIPT SFASP   RI+ RAGISHGFNFPPRLQV ARKQR+ EG GRRVWRRRKLTKKD+MS +KMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
Subjt:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED

Query:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        NRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
A0A6J1J5H1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X11.3e-8091.07Show/hide
Query:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
        MT+PIPT SFASPL QRI+ RAGISHGFNFPPRLQV ARKQR+ EG GRRVWRRRKLTKKD+MS +KMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED
Subjt:  MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSED

Query:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        NRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  NRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
SwissProt top hitse value%identityAlignment
Q8VZV9 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 73.6e-4863.58Show/hide
Query:  TPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFV
        T S  S +L  I+ R+G         + QV    QR  +  GRRVWRRR LTKKDDM  YKM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FV
Subjt:  TPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFV

Query:  NEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        N VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+AY E DP+KPGP YL E +T
Subjt:  NEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
Arabidopsis top hitse value%identityAlignment
AT5G24314.1 plastid transcriptionally active72.6e-4963.58Show/hide
Query:  TPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFV
        T S  S +L  I+ R+G         + QV    QR  +  GRRVWRRR LTKKDDM  YKM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FV
Subjt:  TPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFV

Query:  NEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        N VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+AY E DP+KPGP YL E +T
Subjt:  NEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
AT5G24314.2 plastid transcriptionally active74.1e-4760.59Show/hide
Query:  TPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRK--------LTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLS
        T S  S +L  I+ R+G         + QV    QR  +  GRRVWRRR         LTKKDDM  YKM R+PF+EEQVRK++E GK++TMDIE+LLL 
Subjt:  TPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRK--------LTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLS

Query:  EDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+AY E DP+KPGP YL E +T
Subjt:  EDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACTCCAATCCCAACACCGTCCTTCGCTTCACCGTTGTTGCAGAGGATAGAGGTGAGGGCGGGAATTTCTCATGGCTTTAACTTTCCCCCGCGGTTACAGGTGGT
CGCCAGAAAGCAGAGAAATGTTGAGGGTGGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGATATGTCGCACTACAAAATGGATCGAATTCCATTCC
TTGAAGAACAGGTAAGGAAGGTAAAGGAACAAGGGAAGCTTATAACAATGGACATCGAAAGACTATTATTATCAGAGGACAACCGGTTCGATTTTGTGAATGAGGTTGCA
GCTGAGGCTAAGGAATATGTGGAGAGCAACCGTGATGAGTATGGGGGTTCCAAGAAAGCTATTCTTCACGTTCTTAGCAACCGAGTGAATGATGCAGGGTTTTATCGGCC
AGATGCATATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAAGAAGAATTTACTTAG
mRNA sequenceShow/hide mRNA sequence
GTCTGTAAATATCATCCGAAAATGAAGATAGCACAGCGATGACTACTCCAATCCCAACACCGTCCTTCGCTTCACCGTTGTTGCAGAGGATAGAGGTGAGGGCGGGAATT
TCTCATGGCTTTAACTTTCCCCCGCGGTTACAGGTGGTCGCCAGAAAGCAGAGAAATGTTGAGGGTGGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGA
TGATATGTCGCACTACAAAATGGATCGAATTCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAAGGGAAGCTTATAACAATGGACATCGAAAGACTATTATTAT
CAGAGGACAACCGGTTCGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTGGAGAGCAACCGTGATGAGTATGGGGGTTCCAAGAAAGCTATTCTTCACGTT
CTTAGCAACCGAGTGAATGATGCAGGGTTTTATCGGCCAGATGCATATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAAGAAGAATTTACTTAGAAGTT
TATTACAAAATCCATTTTCTTATACAAAGATTATCAATGTATTAATCTGCTTTTCCCCGTATTTAAATGTTAGCTTAAAGAACATTTTACTTCTGATTGAGAATGCTGCT
TGGAATACCTCATGAACTTTTTAAACTCGTATGCAGATGATGTAAAAATGCATCGTAATGTCTGTTTTTGCA
Protein sequenceShow/hide protein sequence
MTTPIPTPSFASPLLQRIEVRAGISHGFNFPPRLQVVARKQRNVEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVA
AEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT