; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005522 (gene) of Snake gourd v1 genome

Gene IDTan0005522
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG08:75210389..75211594
RNA-Seq ExpressionTan0005522
SyntenyTan0005522
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7140119.1 hypothetical protein RHSIM_Rhsim06G0115000 [Rhododendron simsii]5.3e-2834.92Show/hide
Query:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQE-----------------
        M +L+K D NAH +V+ +P + WSRH+F    K+D LLNN  E FN    EAR+KPII M+E IR  +M R  +  G   K E                 
Subjt:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQE-----------------

Query:  ---------GNLGYRIK-GK------LEEIKKTSGNVRSTWA-----------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPV
                 G+L + +K GK      LE+   T    + T                   +Y  +++  ET  + Y+  + P NG NLW +T   P+ PP 
Subjt:  ---------GNLGYRIK-GK------LEEIKKTSGNVRSTWA-----------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPV

Query:  LRRPPGRPKRQRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKVG
        LRRP GRP++QR+++  E +    +RR   TV C KC   GHN R+CKG VG
Subjt:  LRRPPGRPKRQRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKVG

KAG5541483.1 hypothetical protein RHGRI_021341 [Rhododendron griersonianum]2.1e-2933.33Show/hide
Query:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT
        M +L+  DV A  +V  +P   W RH+F  + K+D LLNN  E FNS I EAR+KPI+ M+E IR  +M+R  +      K EG+L   IK +L   ++ 
Subjt:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT

Query:  SGNVRSTWA----------------------------------------------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQP
        S N    W+                                                     YV  ++   T  + Y+  + PVNGPN+W KT   P+QP
Subjt:  SGNVRSTWA----------------------------------------------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQP

Query:  PVLRRPPGRPKRQRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKVGRQRQKRK
        P  RRP GRPK+QR+R+  E +    + R+  TV C +C   GHN R+CKG VG  ++  K
Subjt:  PVLRRPPGRPKRQRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKVGRQRQKRK

PNX99504.1 hypothetical protein L195_g022770 [Trifolium pratense]5.1e-3135.66Show/hide
Query:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT
        M+ ++ LD NA   +   P +FWSR  F+T  + DL +NN  E+FN  I E RDKPII +LE I+  +  RI ++     + EGN+  RI+  LE+ KKT
Subjt:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT

Query:  SGNVRSTW-----------------------------------------------------ADYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQ
        +    STW                                                      DYV  +Y K T + TYS  + P NGP LWP   +DP+ 
Subjt:  SGNVRSTW-----------------------------------------------------ADYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQ

Query:  PPVLRRPPGRPKRQRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKVGRQR
        PP +RR  GRPK+ R +   E R    V R  PTV C +CK +GHN RSCKGK   +R
Subjt:  PPVLRRPPGRPKRQRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKVGRQR

XP_023877950.1 uncharacterized protein LOC111990411 [Quercus suber]5.3e-2834.58Show/hide
Query:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT
        M++++K++  A  +    P   W+R +F+T+ + D L NN  ESFN+ I E RDKPII M+E IR  +M R  +     ++ +G +  RI+ KLE  K  
Subjt:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT

Query:  S--------------------------GNVRSTWADYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPVLRRPPGRPKRQRKRDVAEARPNQS
        S                          G+      DYVHQ+Y  E+L   +   + P +G NLWP++  DP+ PP  RR PGRPK+ RKR+  E R    
Subjt:  S--------------------------GNVRSTWADYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPVLRRPPGRPKRQRKRDVAEARPNQS

Query:  VRRQTPTVRCSKCKNIGHNSRSCKGKVGRQRQKRKRTTFM
        + R    +RCS+C  +GHN R CK      +Q++K   F+
Subjt:  VRRQTPTVRCSKCKNIGHNSRSCKGKVGRQRQKRKRTTFM

XP_028112221.1 uncharacterized protein LOC114310445 [Camellia sinensis]4.9e-3438.75Show/hide
Query:  LEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKTSGN
        L  +D  A+ ++  +    WSRH F    KS+ LLNN SE FNS++ +ARDK I+ M+E+IR+ +M RI        K +G +  +I+ K+E+ K  S  
Subjt:  LEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKTSGN

Query:  VRSTWA-----------------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPVLRRPPGRPKRQRKRDVAEARPNQSVRRQTP
           TW+                       DYVH ++ KET ++TY + + P+NGP+LWPKT  DPL PP L+RP GRP + R RD  E +    ++R+  
Subjt:  VRSTWA-----------------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPVLRRPPGRPKRQRKRDVAEARPNQSVRRQTP

Query:  TVRCSKCKNIGHNSRSC----KGKVGRQRQKRKRTTFMGF
        T++CSKC   GHN R+C    KGK      K   +TFMGF
Subjt:  TVRCSKCKNIGHNSRSC----KGKVGRQRQKRKRTTFMGF

TrEMBL top hitse value%identityAlignment
A0A2K3N920 SWIM-type domain-containing protein2.5e-3135.66Show/hide
Query:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT
        M+ ++ LD NA   +   P +FWSR  F+T  + DL +NN  E+FN  I E RDKPII +LE I+  +  RI ++     + EGN+  RI+  LE+ KKT
Subjt:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT

Query:  SGNVRSTW-----------------------------------------------------ADYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQ
        +    STW                                                      DYV  +Y K T + TYS  + P NGP LWP   +DP+ 
Subjt:  SGNVRSTW-----------------------------------------------------ADYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQ

Query:  PPVLRRPPGRPKRQRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKVGRQR
        PP +RR  GRPK+ R +   E R    V R  PTV C +CK +GHN RSCKGK   +R
Subjt:  PPVLRRPPGRPKRQRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKVGRQR

A0A2N9FFQ0 CCHC-type domain-containing protein1.2e-3037.44Show/hide
Query:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT
        MK+L+++D  A  +V++ P   W +H F+ + K D L+NN  ESFN  I +AR KPII ++E IR  +M R         K EG+L   I+ KL   K  
Subjt:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT

Query:  SGN------------------------VRSTWADYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPVLRRPPGRPKRQRKRDVAEARPNQS-V
        SGN                         R    DYV Q Y   T +  Y   + P+NGP++W  T   P++PP +RRPPGRPK+ R+R+  E RP  + +
Subjt:  SGN------------------------VRSTWADYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPVLRRPPGRPKRQRKRDVAEARPNQS-V

Query:  RRQTPTVRCSKCKNIGHNSRSCKGKVG
         ++   ++C KC   GHN R+CKGKVG
Subjt:  RRQTPTVRCSKCKNIGHNSRSCKGKVG

A0A2N9FZE3 SWIM-type domain-containing protein1.4e-2930.41Show/hide
Query:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT
        M+++E +   AH  ++      W+RH+F  Y K D+LLNN  E+FNS I  AR KPII MLE IR+ +M+RI +      K +G +  RI+ KL++ K  
Subjt:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT

Query:  SGNVRSTWA--------------------------------------------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPV
        S      W                                                   DYV  ++ K+T +K YS  ++P NGP+ WP    DP+ PP+
Subjt:  SGNVRSTWA--------------------------------------------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPV

Query:  LRRPPGRPKR-QRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKV--------------------------GRQRQKRKRTTFMGFNIPSSQQ
         RR PGRPKR  R++D  E + +  ++R   +++C +C  +GHN RSCK K                           G++R       FMGF IP+S  
Subjt:  LRRPPGRPKR-QRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKV--------------------------GRQRQKRKRTTFMGFNIPSSQQ

Query:  DDDMDVQ----IISSQRGN
         D+   +    + SS +GN
Subjt:  DDDMDVQ----IISSQRGN

A0A2N9HT52 SWIM-type domain-containing protein3.9e-2928.49Show/hide
Query:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT
        M+++E +   AH  ++      W+RH+F  Y K D+LLNN  E+FNS I  AR KPII MLE IR+ +M+RI +      K +G +  RI+ KL++ K  
Subjt:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT

Query:  SGNVRSTWA--------------------------------------------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPV
        S      W                                                   DYV  ++ K+T +K YS  ++P NGP+ WP    DP+ PP+
Subjt:  SGNVRSTWA--------------------------------------------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPV

Query:  LRRPPGRPKR-QRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKV--------------------------GRQRQKRKRTTFMGFNIPSSQQ
         RR PGRPKR  R++D  E + +  ++R   +++C +C  +GHN RSCK K                           G++R       FMGF IP+S  
Subjt:  LRRPPGRPKR-QRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKV--------------------------GRQRQKRKRTTFMGFNIPSSQQ

Query:  DDDMDVQIISSQRGNPSSSGSKRMYRTRSKMQDLKKDLDRGMEMQKDFFLG
         D+   +   +   +   +G +    T       +  +  GM  Q+   LG
Subjt:  DDDMDVQIISSQRGNPSSSGSKRMYRTRSKMQDLKKDLDRGMEMQKDFFLG

A0A2N9I0N2 SWIM-type domain-containing protein3.9e-2928.49Show/hide
Query:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT
        M+++E +   AH  ++      W+RH+F  Y K D+LLNN  E+FNS I  AR KPII MLE IR+ +M+RI +      K +G +  RI+ KL++ K  
Subjt:  MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKT

Query:  SGNVRSTWA--------------------------------------------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPV
        S      W                                                   DYV  ++ K+T +K YS  ++P NGP+ WP    DP+ PP+
Subjt:  SGNVRSTWA--------------------------------------------------DYVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPV

Query:  LRRPPGRPKR-QRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKV--------------------------GRQRQKRKRTTFMGFNIPSSQQ
         RR PGRPKR  R++D  E + +  ++R   +++C +C  +GHN RSCK K                           G++R       FMGF IP+S  
Subjt:  LRRPPGRPKR-QRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKV--------------------------GRQRQKRKRTTFMGFNIPSSQQ

Query:  DDDMDVQIISSQRGNPSSSGSKRMYRTRSKMQDLKKDLDRGMEMQKDFFLG
         D+   +   +   +   +G +    T       +  +  GM  Q+   LG
Subjt:  DDDMDVQIISSQRGNPSSSGSKRMYRTRSKMQDLKKDLDRGMEMQKDFFLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATTTAGAGAAACTTGATGTCAATGCTCATCTGTATGTAAAGAACATACCAACAAGGTTTTGGTCGAGGCATAGTTTCCAAACATATTGTAAGTCTGACCTCTT
GTTAAACAATAACTCTGAGTCATTTAATTCCTTCATCAGTGAAGCACGAGACAAACCTATAATACAAATGTTAGAGGTAATTCGTAAGCTTGTCATGTCTAGAATTACAA
GAAAGTTTGGGTACTACAGTAAACAAGAAGGAAATTTAGGATACAGAATCAAAGGAAAGCTAGAAGAGATTAAGAAAACATCTGGAAATGTGAGATCGACGTGGGCGGAT
TATGTCCACCAATTTTATCACAAGGAGACTCTAATTAAAACATACTCAAGCTTTCTCAAACCTGTGAATGGACCCAATCTTTGGCCTAAAACAACCGCAGACCCACTTCA
ACCACCTGTATTAAGACGACCTCCAGGACGACCAAAAAGACAGCGTAAGAGAGATGTCGCTGAAGCTAGACCGAACCAATCCGTGCGACGACAAACACCTACTGTAAGAT
GCAGCAAGTGCAAGAACATTGGGCATAATTCACGATCATGTAAGGGTAAAGTCGGGAGGCAAAGACAAAAGAGGAAGAGAACAACATTTATGGGTTTCAATATCCCATCT
TCGCAGCAAGATGATGACATGGATGTGCAAATCATTTCGTCCCAACGTGGTAATCCATCTTCTAGTGGATCTAAAAGGATGTATAGAACTCGATCAAAGATGCAGGACTT
GAAGAAGGATCTGGATAGAGGAATGGAGATGCAGAAAGATTTCTTTTTGGGGGAGGACTTGCAGGATCAATGTTGTGCAAAGACCAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATTTAGAGAAACTTGATGTCAATGCTCATCTGTATGTAAAGAACATACCAACAAGGTTTTGGTCGAGGCATAGTTTCCAAACATATTGTAAGTCTGACCTCTT
GTTAAACAATAACTCTGAGTCATTTAATTCCTTCATCAGTGAAGCACGAGACAAACCTATAATACAAATGTTAGAGGTAATTCGTAAGCTTGTCATGTCTAGAATTACAA
GAAAGTTTGGGTACTACAGTAAACAAGAAGGAAATTTAGGATACAGAATCAAAGGAAAGCTAGAAGAGATTAAGAAAACATCTGGAAATGTGAGATCGACGTGGGCGGAT
TATGTCCACCAATTTTATCACAAGGAGACTCTAATTAAAACATACTCAAGCTTTCTCAAACCTGTGAATGGACCCAATCTTTGGCCTAAAACAACCGCAGACCCACTTCA
ACCACCTGTATTAAGACGACCTCCAGGACGACCAAAAAGACAGCGTAAGAGAGATGTCGCTGAAGCTAGACCGAACCAATCCGTGCGACGACAAACACCTACTGTAAGAT
GCAGCAAGTGCAAGAACATTGGGCATAATTCACGATCATGTAAGGGTAAAGTCGGGAGGCAAAGACAAAAGAGGAAGAGAACAACATTTATGGGTTTCAATATCCCATCT
TCGCAGCAAGATGATGACATGGATGTGCAAATCATTTCGTCCCAACGTGGTAATCCATCTTCTAGTGGATCTAAAAGGATGTATAGAACTCGATCAAAGATGCAGGACTT
GAAGAAGGATCTGGATAGAGGAATGGAGATGCAGAAAGATTTCTTTTTGGGGGAGGACTTGCAGGATCAATGTTGTGCAAAGACCAATGAATGA
Protein sequenceShow/hide protein sequence
MKDLEKLDVNAHLYVKNIPTRFWSRHSFQTYCKSDLLLNNNSESFNSFISEARDKPIIQMLEVIRKLVMSRITRKFGYYSKQEGNLGYRIKGKLEEIKKTSGNVRSTWAD
YVHQFYHKETLIKTYSSFLKPVNGPNLWPKTTADPLQPPVLRRPPGRPKRQRKRDVAEARPNQSVRRQTPTVRCSKCKNIGHNSRSCKGKVGRQRQKRKRTTFMGFNIPS
SQQDDDMDVQIISSQRGNPSSSGSKRMYRTRSKMQDLKKDLDRGMEMQKDFFLGEDLQDQCCAKTNE