; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005550 (gene) of Snake gourd v1 genome

Gene IDTan0005550
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionzinc finger protein GIS2
Genome locationLG02:7148450..7150502
RNA-Seq ExpressionTan0005550
SyntenyTan0005550
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588419.1 hypothetical protein SDJN03_16984, partial [Cucurbita argyrosperma subsp. sororia]1.1e-14995.82Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRD+LCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGH+ASSC N
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+RGDRGIGSG G
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  GGSIR-GGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        GGSIR GG GGYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  GGSIR-GGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_008448055.1 PREDICTED: zinc finger protein GIS2 [Cucumis melo]2.9e-15096.18Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRD+LCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
         G  RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_022136056.1 zinc finger protein GIS2 [Momordica charantia]6.5e-15095.82Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRF+YRDAPYRRESRRGFSRD+LCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSN+L DR DRGIGS  G
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  GGSIRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        GGS+RGG+ GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  GGSIRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_022971383.1 zinc finger protein GIS2-like [Cucurbita maxima]8.5e-15096.18Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRD+LCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGH+ASSC N
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGS  G
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        GGSIRGG GGYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

XP_038887879.1 zinc finger protein GIS2 [Benincasa hispida]1.5e-15196.56Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRD+LCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPP+PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
         G  RGGA GYRDVVCRNCQQLGHMSRDCMGPL+ICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

TrEMBL top hitse value%identityAlignment
A0A0A0K138 Uncharacterized protein7.0e-15095.42Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRD+LCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPP+PPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
         G  RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+R+PRRY
Subjt:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A1S3BIU7 zinc finger protein GIS21.4e-15096.18Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRD+LCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRAR+CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGI SGGG
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
         G  RG   GYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFM+RYPRRY
Subjt:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1C2F8 zinc finger protein GIS23.1e-15095.82Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSPLDRKIRSDRF+YRDAPYRRESRRGFSRD+LCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMA+SCPN
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSN+L DR DRGIGS  G
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  GGSIRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        GGS+RGG+ GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  GGSIRGGA-GGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1EYM8 zinc finger protein GIS2-like2.9e-14895.44Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRD+LCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGH+ASSC N
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLG+RGDRGIGS  G
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  GGSIR-GGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        GGSIR GG GGYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  GGSIR-GGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

A0A6J1I6P4 zinc finger protein GIS2-like4.1e-15096.18Show/hide
Query:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        MSSDSRSRSRSRSRSP+ RKIRSDRFSYRDAPYRRESRRGFSRD+LCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGH+ASSC N
Subjt:  MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG
        EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGS  G
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGG

Query:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY
        GGSIRGG GGYRDVVCR CQQLGHMSRDCM PLMICHNCGGRGHLAYECPSGRFMERYPRRY
Subjt:  GGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY

SwissProt top hitse value%identityAlignment
O42395 Cellular nucleic acid-binding protein4.5e-2135.93Show/hide
Query:  CKNCKRPGHFARECPN-----------------------VAICHNCGLPGHIASECTTK--SLCWNCREPGHMASSC-----PNEGICHTCGKAGHRARE
        C  C R GH+ARECP                          IC+ CG  GH+A +C  +    C+NC   GH+A  C       E  C+ CGK GH AR+
Subjt:  CKNCKRPGHFARECPN-----------------------VAICHNCGLPGHIASECTTK--SLCWNCREPGHMASSC-----PNEGICHTCGKAGHRARE

Query:  CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC
        C        D + C +C + GHI  DCT  K C  C +TGH+A +C   ++  C  C  SGH+AR+C
Subjt:  CTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC

P36627 Cellular nucleic acid-binding protein homolog2.7e-2132.46Show/hide
Query:  CHNCGLPGHIASECTTKSLCWNCREPGHMASSC---PNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC
        C+NCG  GH A ECT  S+C+NC + GH AS C     E  C+ CG AGH  R+C + P P      C  C + GHIA DC      +  R  GH     
Subjt:  CHNCGLPGHIASECTTKSLCWNCREPGHMASSC---PNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC

Query:  PNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGGGSIRGGAGGYRDVVCRNCQQLGHMSRDCM--GPLMICHNCGGRGHLAYECPS
         ++  C  C   GH AR C                                V C +C ++GH S +C       +C+ C   GH+A  C S
Subjt:  PNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGGGSIRGGAGGYRDVVCRNCQQLGHMSRDCM--GPLMICHNCGGRGHLAYECPS

P53849 Zinc finger protein GIS24.0e-2536.24Show/hide
Query:  CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTK-----SLCWNCREPGHMASSCPNEGICHTCGKAGHRARECTAPPLPPGDLRL-CNNCYKQGHIA
        C  C + GH A +C +  +C+NC  PGH+ ++CT         C+NC E GH+ S C  +  C  C + GH +REC  P       ++ C  C    H+A
Subjt:  CKNCKRPGHFARECPNVAICHNCGLPGHIASECTTK-----SLCWNCREPGHMASSCPNEGICHTCGKAGHRARECTAPPLPPGDLRL-CNNCYKQGHIA

Query:  ADCTNEKA-----CNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKS
         DC  E       C  C + GH++RDC ND +C  CN +GH+++ CPK+
Subjt:  ADCTNEKA-----CNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKS

Q04832 DNA-binding protein HEXBP2.9e-2830.43Show/hide
Query:  CKNCKRPGHFARECPNV--------AICHNCGLPGHIASECTTKS--------LCWNCREPGHMASSCPNEG--------ICHTCGKAGHRARECT----
        C+NC + GH+ARECP            C  CG  GH++ EC  ++         C+ C E GHM+  CPN           C+ CG+ GH +R+C     
Subjt:  CKNCKRPGHFARECPNV--------AICHNCGLPGHIASECTTKS--------LCWNCREPGHMASSCPNEG--------ICHTCGKAGHRARECT----

Query:  --------------APPLPPGDLRLCNNCYKQGHIAADCTN---------EKACNNCRKTGHLARDCPN---------DPICNLCNVSGHVARQCPKSNV
                      A     GD R C  C   GHI+ DC N         ++ C  C   GH++RDCPN         D  C  C  SGH++R+CP +  
Subjt:  --------------APPLPPGDLRLCNNCYKQGHIAADCTN---------EKACNNCRKTGHLARDCPN---------DPICNLCNVSGHVARQCPKSNV

Query:  LGDRGDRGIGSGGGGGSIRGGAGGYRDVVCRNCQQLGHMSRDCM-----------GPLMICHNCGGRGHLAYECPS
                 GS G G           D  C  C + GH+SR+C            G    C+ CG  GH++ +CPS
Subjt:  LGDRGDRGIGSGGGGGSIRGGAGGYRDVVCRNCQQLGHMSRDCM-----------GPLMICHNCGGRGHLAYECPS

Q3T0Q6 Cellular nucleic acid-binding protein2.0e-2136.36Show/hide
Query:  CKNCKRPGHFARECPNVA----------------------ICHNCGLPGHIASEC-TTKSLCWNCREPGHMASSC-----PNEGICHTCGKAGHRARECT
        C  C R GH+ARECP                         IC+ CG  GH+A +C   +  C+NC   GH+A  C       E  C+ CGK GH AR+C 
Subjt:  CKNCKRPGHFARECPNVA----------------------ICHNCGLPGHIASEC-TTKSLCWNCREPGHMASSC-----PNEGICHTCGKAGHRARECT

Query:  APPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC
               D + C +C + GHI  DCT  K C  C +TGH+A +C   ++  C  C  SGH+AR+C
Subjt:  APPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDC--PNDPICNLCNVSGHVARQC

Arabidopsis top hitse value%identityAlignment
AT1G75560.1 zinc knuckle (CCHC-type) family protein5.0e-9262.64Show/hide
Query:  SDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        S SRSR R RSRSP DR++RS+R SY DAP R  RE RR FS+ +LC NCKRPGHFAR+C NV++C+NCGLPGHIA+ECT +S CWNCREPGH+AS+C N
Subjt:  SDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG
        EGICH+CGK+GHRAR+C+      GDLRLCNNC+KQGH+AADCTN+KAC NCR +GH+ARDC NDP+CN+C++SGHVAR CPK +    DRG R      
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG

Query:  GGGSIRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY
         GG  RGG              L  MSRD  G   ++ICHNCGGRGH AYECPS R  +R  RRY
Subjt:  GGGSIRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY

AT1G75560.2 zinc knuckle (CCHC-type) family protein5.0e-9262.64Show/hide
Query:  SDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN
        S SRSR R RSRSP DR++RS+R SY DAP R  RE RR FS+ +LC NCKRPGHFAR+C NV++C+NCGLPGHIA+ECT +S CWNCREPGH+AS+C N
Subjt:  SDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYR--RESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPN

Query:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG
        EGICH+CGK+GHRAR+C+      GDLRLCNNC+KQGH+AADCTN+KAC NCR +GH+ARDC NDP+CN+C++SGHVAR CPK +    DRG R      
Subjt:  EGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV-LGDRGDRGIGSGG

Query:  GGGSIRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY
         GG  RGG              L  MSRD  G   ++ICHNCGGRGH AYECPS R  +R  RRY
Subjt:  GGGSIRGGAGGYRDVVCRNCQQLGHMSRDCMG--PLMICHNCGGRGHLAYECPSGRFMERYPRRY

AT2G17870.1 cold shock domain protein 32.9e-1530.09Show/hide
Query:  CHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARECTA-----PPLPPGDLRLCNNCYKQGHIAADC----------------T
        C NCG  GH+A +C   S   +    G   S    EG C+ CG  GH AR+C            G  R C +C + GH+A DC                +
Subjt:  CHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARECTA-----PPLPPGDLRLCNNCYKQGHIAADC----------------T

Query:  NEKACNNCRKTGHLARDCPND---------PICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGGGSIRGGAGGYRDVVCRNCQQLGHMSRDC------
            C  C   GH ARDC  +           C  C   GH+A+ C             I SGGGGG             C  C   GH++RDC      
Subjt:  NEKACNNCRKTGHLARDCPND---------PICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGGGSIRGGAGGYRDVVCRNCQQLGHMSRDC------

Query:  ----MGPLMICHNCGGRGHLAYECPS
             G    C  CG  GH A EC S
Subjt:  ----MGPLMICHNCGGRGHLAYECPS

AT3G43590.1 zinc knuckle (CCHC-type) family protein8.8e-1224.66Show/hide
Query:  CHNCGLPGHIASECTT----KSLCWNCREPGHMASSCPNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKA--------CNNCR
        C++CG  GH +  C T    +  C+ C    H A  C     C+ C K GHRA++C           +C  C   GH    C  E +        C  C+
Subjt:  CHNCGLPGHIASECTT----KSLCWNCREPGHMASSCPNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKA--------CNNCR

Query:  KTGHLARDCPNDPI-----CNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGGGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMI-----------CH
          GHL    P + +     C  C   GH    C +     +  D          +            C  C + GH +R+C     I           C+
Subjt:  KTGHLARDCPNDPI-----CNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGGGSIRGGAGGYRDVVCRNCQQLGHMSRDCMGPLMI-----------CH

Query:  NCGGRGHLAYECPSGRFMERYPR
         C G GH A ECP+   + +  R
Subjt:  NCGGRGHLAYECPSGRFMERYPR

AT4G36020.1 cold shock domain protein 18.8e-2030.93Show/hide
Query:  SLCKNCKRPGHFARECPNVAICHNCGLPGHIASEC-------------TTKSLCWNCREPGHMASSCPNEGI-------------CHTCGKAGHRARECT
        SL K     G+ AR     + C+NCG  GHI+ +C                  C+NC + GH A  C + G              C+TCG  GH AR+CT
Subjt:  SLCKNCKRPGHFARECPNVAICHNCGLPGHIASEC-------------TTKSLCWNCREPGHMASSCPNEGI-------------CHTCGKAGHRARECT

Query:  APPLPPGDLR--------LCNNCYKQGHIAADCTNEKA-------------CNNCRKTGHLARDCPN----DPICNLCNVSGHVARQCPKSNVLGDRGDR
           +  GD R         C  C   GH A DCT + A             C +C   GH+ARDC         C  C  SGH+AR C +          
Subjt:  APPLPPGDLR--------LCNNCYKQGHIAADCTNEKA-------------CNNCRKTGHLARDCPN----DPICNLCNVSGHVARQCPKSNVLGDRGDR

Query:  GIGSGGGGGSIRGGAGGYRDVVCRNCQQLGHMSRDC
          GSGGGG           D  C  C + GH +R+C
Subjt:  GIGSGGGGGSIRGGAGGYRDVVCRNCQQLGHMSRDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGATAGCAGGAGTCGGAGCAGGAGCAGGAGCAGAAGCCCACTGGATCGTAAGATTCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATC
ACGTCGGGGTTTCAGTCGGGACAGTCTTTGCAAGAACTGCAAGCGGCCCGGCCATTTTGCCAGAGAATGCCCCAATGTGGCAATTTGTCACAACTGTGGTCTCCCTGGGC
ATATTGCTTCAGAGTGCACAACAAAGTCACTATGTTGGAATTGTCGAGAACCTGGTCACATGGCGAGTAGCTGTCCCAATGAAGGCATCTGCCACACCTGTGGTAAGGCG
GGACATCGGGCCAGGGAATGCACGGCCCCTCCGTTGCCACCCGGGGACCTGAGGCTTTGCAACAATTGCTATAAGCAAGGTCATATAGCAGCTGATTGTACTAATGAGAA
GGCATGTAACAATTGCAGGAAGACTGGCCATCTTGCTCGCGATTGTCCAAATGACCCTATTTGCAACCTCTGTAATGTATCAGGGCATGTGGCCAGACAGTGTCCAAAAT
CCAACGTCCTCGGAGACCGAGGAGACCGAGGCATCGGCAGTGGTGGTGGCGGTGGCAGTATACGTGGTGGCGCTGGTGGTTACCGGGATGTTGTGTGCAGGAACTGCCAG
CAGCTTGGCCATATGAGTAGGGATTGCATGGGCCCTTTGATGATTTGTCATAACTGCGGGGGACGTGGTCACCTGGCATACGAATGCCCTTCGGGTCGGTTTATGGAGCG
TTATCCCAGGAGGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGATAGCAGGAGTCGGAGCAGGAGCAGGAGCAGAAGCCCACTGGATCGTAAGATTCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATC
ACGTCGGGGTTTCAGTCGGGACAGTCTTTGCAAGAACTGCAAGCGGCCCGGCCATTTTGCCAGAGAATGCCCCAATGTGGCAATTTGTCACAACTGTGGTCTCCCTGGGC
ATATTGCTTCAGAGTGCACAACAAAGTCACTATGTTGGAATTGTCGAGAACCTGGTCACATGGCGAGTAGCTGTCCCAATGAAGGCATCTGCCACACCTGTGGTAAGGCG
GGACATCGGGCCAGGGAATGCACGGCCCCTCCGTTGCCACCCGGGGACCTGAGGCTTTGCAACAATTGCTATAAGCAAGGTCATATAGCAGCTGATTGTACTAATGAGAA
GGCATGTAACAATTGCAGGAAGACTGGCCATCTTGCTCGCGATTGTCCAAATGACCCTATTTGCAACCTCTGTAATGTATCAGGGCATGTGGCCAGACAGTGTCCAAAAT
CCAACGTCCTCGGAGACCGAGGAGACCGAGGCATCGGCAGTGGTGGTGGCGGTGGCAGTATACGTGGTGGCGCTGGTGGTTACCGGGATGTTGTGTGCAGGAACTGCCAG
CAGCTTGGCCATATGAGTAGGGATTGCATGGGCCCTTTGATGATTTGTCATAACTGCGGGGGACGTGGTCACCTGGCATACGAATGCCCTTCGGGTCGGTTTATGGAGCG
TTATCCCAGGAGGTACTGA
Protein sequenceShow/hide protein sequence
MSSDSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDSLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKA
GHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGGGSIRGGAGGYRDVVCRNCQ
QLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMERYPRRY