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Tan0005551 (gene) of Snake gourd v1 genome

Gene IDTan0005551
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionArabinogalactan peptide 23
Genome locationLG08:59429315..59429610
RNA-Seq ExpressionTan0005551
SyntenyTan0005551
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043704.1 Arabinogalactan peptide 23 [Cucumis melo var. makuwa]2.1e-1180Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
        M+MKKVTCAVLVAAAAVSA MA+ EGPA AP  SS A +ALPAVG FIGAS+VSFFAYYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
KAF8043870.1 hypothetical protein BT93_A1997 [Corymbia citriodora subsp. variegata]2.5e-0966.67Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
        M+MKK++CAVLVAAA+++A +AS + PA APGPSSGA++ALP   + +GASVVSFFAYYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
KCW90250.1 hypothetical protein EUGRSUZ_A02403, partial [Eucalyptus grandis]2.3e-1070Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
        M+MKK++CAVLVAAA++SA +AS + PA APGPSSGA++ALP  G+ +GASVVSFFAYYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
OMO63159.1 arabinogalactan peptide 23-like protein [Corchorus capsularis]3.9e-1066.67Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
        M+MKK++CAV+VAAA++SAA+A+G+ PA+APGP+S AASALP +G+ +GAS+VSF AYYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
XP_038906349.1 arabinogalactan protein 23 [Benincasa hispida]1.0e-1078.69Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSS-GAASALPAVGTFIGASVVSFFAYYL
        M+MKKVTCAVLV+AA +SA MASGEGPA APG SS  AA+ALPAVG FIGAS+ SFFAYYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSS-GAASALPAVGTFIGASVVSFFAYYL
TrEMBL top hitse value%identityAlignment
A0A059DIY4 Uncharacterized protein (Fragment)1.1e-1070Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
        M+MKK++CAVLVAAA++SA +AS + PA APGPSSGA++ALP  G+ +GASVVSFFAYYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
A0A1R3GYJ0 Arabinogalactan peptide 23-like protein1.9e-1066.67Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
        M+MKK++CAV+VAAA++SAA+A+G+ PA+APGP+S AASALP +G+ +GAS+VSF AYYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
A0A1R3HIL4 Arabinogalactan peptide 23-like protein4.7e-0965.57Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGP-SSGAASALPAVGTFIGASVVSFFAYYL
        M+MKK++CAV+VAAA++SAA+A+G+ PA+APGP +S AASALP +G+ +GAS+VSF AYYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGP-SSGAASALPAVGTFIGASVVSFFAYYL
A0A5D3DQ83 Arabinogalactan peptide 231.0e-1180Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
        M+MKKVTCAVLVAAAAVSA MA+ EGPA AP  SS A +ALPAVG FIGAS+VSFFAYYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
V7AHI5 Uncharacterized protein4.7e-0966.1Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYY
        M+M+KVTCA+L+AAA+VSA MA+ E PA APGPSSGA++A P VG+ +GASV+SFFA +
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYY
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 231.0e-0858.33Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
        M MKK+ C VL AAA+++A MA+ E  A APGP+S A++ALPA+G+ +GAS+VS F+YYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)1.1e-0757.38Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGP-SSGAASALPAVGTFIGASVVSFFAYYL
        M MKK+ C V+ AAA+++A MA+  G A APGP +SGA+ A+PA+G+ +GAS+VS FAYYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGP-SSGAASALPAVGTFIGASVVSFFAYYL
AT3G57690.1 arabinogalactan protein 237.1e-1058.33Show/hide
Query:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL
        M MKK+ C VL AAA+++A MA+ E  A APGP+S A++ALPA+G+ +GAS+VS F+YYL
Subjt:  MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATGAAGAAGGTCACCTGCGCCGTCCTCGTTGCCGCTGCTGCTGTGAGCGCCGCTATGGCCTCCGGTGAAGGCCCGGCTTCCGCTCCCGGTCCGTCCTCCGGCGC
TGCTTCTGCTTTGCCAGCCGTTGGCACCTTCATTGGTGCTTCTGTTGTTTCTTTCTTTGCCTATTACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACATGAAGAAGGTCACCTGCGCCGTCCTCGTTGCCGCTGCTGCTGTGAGCGCCGCTATGGCCTCCGGTGAAGGCCCGGCTTCCGCTCCCGGTCCGTCCTCCGGCGC
TGCTTCTGCTTTGCCAGCCGTTGGCACCTTCATTGGTGCTTCTGTTGTTTCTTTCTTTGCCTATTACTTGTAAGAGGTTGAGTGAAGGAATGAGAAAGGAATAGGAGGCC
TTAAGGGAAATTAATTATGCAACATGGAAAGAGAGAAACTTGTTAGAGAGTGGATTTATGGTGTGGTTTGGAGGAG
Protein sequenceShow/hide protein sequence
MNMKKVTCAVLVAAAAVSAAMASGEGPASAPGPSSGAASALPAVGTFIGASVVSFFAYYL