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Tan0005559 (gene) of Snake gourd v1 genome

Gene IDTan0005559
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionB3 domain-containing protein At2g31420-like
Genome locationLG08:11010582..11011046
RNA-Seq ExpressionTan0005559
SyntenyTan0005559
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586098.1 hypothetical protein SDJN03_18831, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3756.95Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF
        MR QIEEM GYNL LVI K+L+++D+++ +GRLF+ + ++LF F T  E++LLN+ N            +MEVKILDEGQRVS +FLTK  I+    YC 
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF

Query:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVR
        TTHWNSFV  N L+   +IQLWSFRRVRLVD +N  FTSDLYFALN +D R
Subjt:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVR
KAG7020923.1 hypothetical protein SDJN02_17611, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3757.79Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF
        MR QIE+MHGYNL LVI K+L+++D++ ++GRLF  + ++ FDF T  EK+LLN+ N             MEVKI+DE QRVS +FLTK  I+ Q  Y F
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF

Query:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
        TTHWNSFV+ N L+   +IQLWSFRRVRLVD DN  FTSDLYFALN +D R VL
Subjt:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
XP_022938318.1 B3 domain-containing protein At2g31420-like [Cucurbita moschata]6.7e-3855.19Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF
        MR +IE+MHGYNL +VI K+L+D D++K +GR+F  +  + FDF T KEK++LN+ N             +EVKI+DE QRVS +FLTK  IE    Y F
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF

Query:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
        TTHWNSFV+ N L+   +IQLWSFRRVRL+D DN  FTSDLYFALN +D R +L
Subjt:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
XP_022938320.1 B3 domain-containing protein At1g05930-like [Cucurbita moschata]6.7e-3857.62Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF
        MR QIEEM GYNL LVI K+L+++D+++ +GRLF+ + ++LFDF T  E++LLN+ N             MEVKILDEGQRVS +FLTK  I+    YC 
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF

Query:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVR
        TTHWNSFV  N L+   +IQLWSFRRVRLVD +N  FTSDLYFALN +D R
Subjt:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVR
XP_022969589.1 B3 domain-containing protein At2g31420-like [Cucurbita maxima]1.4e-3857.14Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF
        MR QIE+MHGYNL +VI K+L+D D++K +GR+F  +  + FDF T KEK+LLN+ N             MEVKI+DE QRVS +FLTK  I+    Y F
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF

Query:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
        TTHWNSFV+ N L+   +IQLWSFRRVRLVD DN  FTSDLYFALN +D R +L
Subjt:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
TrEMBL top hitse value%identityAlignment
A0A6J1CSV9 B3 domain-containing protein At2g31420-like1.6e-2143.33Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF
        +R++I E+ GY++ +VIQK+L D+D++++ GRL IP+ +LL DFTT++EKQLL+  + + NN      N +   ILD   R STI L K  I S+  YC 
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF

Query:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDV
         + WNS    N L     IQLWSFR+      ++GT T  L FAL +LD+
Subjt:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDV
A0A6J1FDQ3 B3 domain-containing protein At2g31420-like9.4e-3857.14Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF
        MR QIE+MHGYNL LVI K+L+++D++ ++GRLF  + ++ FDF T  EK+LLN+ N             MEVKI+DE QRVS +FLTK  I+ Q  Y F
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF

Query:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
        TTHWNSFV+ N L+   +IQLWSFRRVRLVD DN  FTSDLYFALN +D R +L
Subjt:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
A0A6J1FIJ8 B3 domain-containing protein At2g31420-like3.2e-3855.19Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF
        MR +IE+MHGYNL +VI K+L+D D++K +GR+F  +  + FDF T KEK++LN+ N             +EVKI+DE QRVS +FLTK  IE    Y F
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF

Query:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
        TTHWNSFV+ N L+   +IQLWSFRRVRL+D DN  FTSDLYFALN +D R +L
Subjt:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
A0A6J1FJF6 B3 domain-containing protein At1g05930-like3.2e-3857.62Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF
        MR QIEEM GYNL LVI K+L+++D+++ +GRLF+ + ++LFDF T  E++LLN+ N             MEVKILDEGQRVS +FLTK  I+    YC 
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF

Query:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVR
        TTHWNSFV  N L+   +IQLWSFRRVRLVD +N  FTSDLYFALN +D R
Subjt:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVR
A0A6J1I325 B3 domain-containing protein At2g31420-like6.5e-3957.14Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF
        MR QIE+MHGYNL +VI K+L+D D++K +GR+F  +  + FDF T KEK+LLN+ N             MEVKI+DE QRVS +FLTK  I+    Y F
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCF

Query:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
        TTHWNSFV+ N L+   +IQLWSFRRVRLVD DN  FTSDLYFALN +D R +L
Subjt:  TTHWNSFVNINGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL
SwissProt top hitse value%identityAlignment
Q1G3B8 B3 domain-containing protein At2g326451.6e-0528.68Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLF-DFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYC
        MRN+    +GYN  L+  ++L  SD+DK + RL +P N++   DF T+ E +++      + N     D+ + V ++D       + L K  ++    Y 
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLF-DFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYC

Query:  FTTHWNSFVNI---NGLRCRQVIQLWSFR
        F   WN  ++    N  + + V  LWSFR
Subjt:  FTTHWNSFVNI---NGLRCRQVIQLWSFR
Arabidopsis top hitse value%identityAlignment
AT2G27410.1 Domain of unknown function (DUF313)3.0e-0427.05Show/hide
Query:  EMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLF-DFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCFTTHWN
        E +GYN  L+  +QL  +D+ K E RL +P  ++   DF T+ E +++      + N     DN + V  +D       + L K  ++    Y F   W 
Subjt:  EMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLF-DFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCFTTHWN

Query:  SFVNINGLRCRQ--VIQLWSFR
        + ++      ++  V  LWSFR
Subjt:  SFVNINGLRCRQ--VIQLWSFR
AT2G32645.1 Domain of unknown function (DUF313)1.1e-0628.68Show/hide
Query:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLF-DFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYC
        MRN+    +GYN  L+  ++L  SD+DK + RL +P N++   DF T+ E +++      + N     D+ + V ++D       + L K  ++    Y 
Subjt:  MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLF-DFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYC

Query:  FTTHWNSFVNI---NGLRCRQVIQLWSFR
        F   WN  ++    N  + + V  LWSFR
Subjt:  FTTHWNSFVNI---NGLRCRQVIQLWSFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAATCAGATTGAGGAAATGCATGGATACAATCTTCATTTAGTGATTCAAAAGCAATTAGTAGACAGTGATGTCGACAAAGACGAAGGCCGTTTATTTATTCCAGT
CAACAGACTCTTATTCGATTTCACCACCGACAAGGAGAAGCAGCTATTGAATAATAATAATAATAATAATAATAATAATCCAAACCAAGAAGACAATTACATGGAAGTCA
AGATTCTTGATGAGGGTCAAAGAGTGAGCACCATTTTCTTGACCAAATGCACCATTGAATCCCAACATTTTTACTGTTTCACCACTCATTGGAATTCTTTTGTCAATATC
AATGGCTTGAGATGTCGCCAAGTTATCCAACTTTGGAGTTTCAGAAGAGTTCGACTTGTTGACTCTGATAATGGAACGTTCACCTCTGATCTTTACTTCGCTTTGAATAG
GCTTGATGTCCGAGGTGTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAATCAGATTGAGGAAATGCATGGATACAATCTTCATTTAGTGATTCAAAAGCAATTAGTAGACAGTGATGTCGACAAAGACGAAGGCCGTTTATTTATTCCAGT
CAACAGACTCTTATTCGATTTCACCACCGACAAGGAGAAGCAGCTATTGAATAATAATAATAATAATAATAATAATAATCCAAACCAAGAAGACAATTACATGGAAGTCA
AGATTCTTGATGAGGGTCAAAGAGTGAGCACCATTTTCTTGACCAAATGCACCATTGAATCCCAACATTTTTACTGTTTCACCACTCATTGGAATTCTTTTGTCAATATC
AATGGCTTGAGATGTCGCCAAGTTATCCAACTTTGGAGTTTCAGAAGAGTTCGACTTGTTGACTCTGATAATGGAACGTTCACCTCTGATCTTTACTTCGCTTTGAATAG
GCTTGATGTCCGAGGTGTTCTTTGA
Protein sequenceShow/hide protein sequence
MRNQIEEMHGYNLHLVIQKQLVDSDVDKDEGRLFIPVNRLLFDFTTDKEKQLLNNNNNNNNNNPNQEDNYMEVKILDEGQRVSTIFLTKCTIESQHFYCFTTHWNSFVNI
NGLRCRQVIQLWSFRRVRLVDSDNGTFTSDLYFALNRLDVRGVL