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Tan0005611 (gene) of Snake gourd v1 genome

Gene IDTan0005611
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionBromo domain-containing protein
Genome locationLG06:48351234..48355026
RNA-Seq ExpressionTan0005611
SyntenyTan0005611
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049895.1 uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa]8.0e-1662.96Show/hide
Query:  VSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQRLQEFE
        ++ +T+    ELK  A QV++G LD NED+IFVQVFGPEKHG V GYGVGV P ELF SSS V DLE  LNE E RL E E
Subjt:  VSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQRLQEFE

KAA0056079.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa]4.2e-1773.44Show/hide
Query:  LKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQ
        +KSYA QV+DGTLD N+D+IFVQ+ GPEKH  V GYGVGVI SELFGSSS V DLERRLNE ++
Subjt:  LKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQ

XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]5.0e-1875Show/hide
Query:  LKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQ
        +KSYA QV+DGTLD N+D+IFVQ+FGPEKH  V GYGVGVI SELFGSSS V DLERRLNE ++
Subjt:  LKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQ

XP_023893229.1 uncharacterized protein LOC112005206 [Quercus suber]2.6e-1438.14Show/hide
Query:  KGVSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNV-RDLERRLNEPEQRLQEFERQRKVEVQALKNQIVE
        + V+  T+ +   L+    QV +G L  ++D++F +VFGPE+HGRV GYG G+ P++L GSSS++  DLE+RL E EQ+  E + +   +V++LK ++ +
Subjt:  KGVSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNV-RDLERRLNEPEQRLQEFERQRKVEVQALKNQIVE

Query:  LKNRFEDRFKTMIAEMRK
        LK+  E +   M+ + R+
Subjt:  LKNRFEDRFKTMIAEMRK

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]2.0e-3569.67Show/hide
Query:  VSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQRLQEFERQRK-------VEVQALKN
        V+ +T+   S+LKSYA QV+DGTLD NEDE FV+VFGPEKHG VHGYGVGV PSELFGSSS +RD ERRLNE EQRLQEFE+QRK       +EV+ LK 
Subjt:  VSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQRLQEFERQRK-------VEVQALKN

Query:  QIVELKNRFEDRFKTMIAEMRK
        QI EL+NRFEDRF+ M+AEM K
Subjt:  QIVELKNRFEDRFKTMIAEMRK

TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968282.4e-1875Show/hide
Query:  LKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQ
        +KSYA QV+DGTLD N+D+IFVQ+FGPEKH  V GYGVGVI SELFGSSS V DLERRLNE ++
Subjt:  LKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQ

A0A2N9HCE0 Uncharacterized protein1.9e-1544.55Show/hide
Query:  VSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSN-VRDLERRLNEPEQRLQEFERQRKVEVQALKNQIVELK
        V+  T+ S   L+S   QV +G+L  +ED++FV+VFGPE+HGRV GYG GV  ++L+GSSS+ + DLE+RL E EQ   E   +   +V+ L+ Q+++LK
Subjt:  VSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSN-VRDLERRLNEPEQRLQEFERQRKVEVQALKNQIVELK

Query:  NRFEDRFKTM
        +  E+R   M
Subjt:  NRFEDRFKTM

A0A2N9HCP8 Uncharacterized protein1.9e-1544.55Show/hide
Query:  VSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSN-VRDLERRLNEPEQRLQEFERQRKVEVQALKNQIVELK
        V+  T+ S   L+S   QV +G+L  +ED++FV+VFGPE+HGRV GYG GV  ++L+GSSS+ + DLE+RL E EQ   E   +   +V+ L+ Q+++LK
Subjt:  VSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSN-VRDLERRLNEPEQRLQEFERQRKVEVQALKNQIVELK

Query:  NRFEDRFKTM
        +  E+R   M
Subjt:  NRFEDRFKTM

A0A5A7U8E9 Uncharacterized protein3.9e-1662.96Show/hide
Query:  VSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQRLQEFE
        ++ +T+    ELK  A QV++G LD NED+IFVQVFGPEKHG V GYGVGV P ELF SSS V DLE  LNE E RL E E
Subjt:  VSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQRLQEFE

A0A5D3BP34 Bromodomain-containing factor 1-like isoform X22.1e-1773.44Show/hide
Query:  LKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQ
        +KSYA QV+DGTLD N+D+IFVQ+ GPEKH  V GYGVGVI SELFGSSS V DLERRLNE ++
Subjt:  LKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCAATTATTGAGAACTTTATCTTCAACTGTTGTAGAAAAAGGAGTTTCAGCATCAACTAAAGGCTCAACATCAGAACTCAAATCATATGCTCCTCAAGTGGTTGA
TGGTACACTTGACAGGAACGAGGACGAGATTTTTGTGCAAGTTTTTGGACCAGAGAAGCATGGACGTGTTCATGGTTATGGGGTAGGTGTTATTCCTTCTGAGTTGTTTG
GATCATCTTCCAATGTACGTGATCTTGAGCGTCGTCTTAATGAGCCAGAACAACGCCTTCAAGAATTTGAACGACAAAGAAAAGTCGAGGTACAAGCCCTCAAAAATCAA
ATTGTTGAATTAAAAAATCGTTTTGAGGATAGATTTAAAACAATGATAGCAGAGATGCGTAAATAA
mRNA sequenceShow/hide mRNA sequence
CCTCAGCCTCTTCAGTCGCTTCATCCTCTTTGTTTCACGCCTCACTGCAAGTTGCCCATCAACCACACAACAGGCAACCGACACGCTCCGGTCAACCAACGTCGCAGATC
TCTGTTCGTCACGTCGTCGCCTGCCTTCAGCCTGAGTTTCGTTCGAACCGTTTCATCTTCTACTCTTCCTCTGCTCTTTTTTTCTTCATGTTTCATCTCCTTCACCTTCC
ATAGCCCTAATCTCCGATTATGGTAGCGACAAAAGTCTCCTCAAACTCTACTACAAGTCGCTTTGTCCTTACAGCGTAAATTTCATTGTGAATTATCTGGCTAACCTTTT
CGACGACGATCTCATCTCCATTGTTGATCTCGCTCGTTCCTTATGGAAACGCAAGGGTTGGTCGCAATGATTCCATCACTTGTCAGGTCGTCACAAAATAAATGGCAATT
TTGAGGTTAATCATTGGTCGTCACCAGACCCCGAAGATGGTGAAAGGAAGGCAAGGAGAGAGAGTTATACTCTACGTAAGGGAAACAATTCTCGGCTATAAGAGACAACA
AGAGTTCATAAGTGGTTCATCTTGGACATCATCAGGTGTTTCAGCTAACGTTCAAGCGTACTACTTTTCCCAGCTTCAAGCCACATCTGTTGAGATTACGACGTAGATGT
TTGTTACTGCTGATGGTTTGATAGGCAACTTTGGTGACTGGATTGGATTCTACAATGTTTCAATTATTGAGAACTTTATCTTCAACTGTTGTAGAAAAAGGAGTTTCAGC
ATCAACTAAAGGCTCAACATCAGAACTCAAATCATATGCTCCTCAAGTGGTTGATGGTACACTTGACAGGAACGAGGACGAGATTTTTGTGCAAGTTTTTGGACCAGAGA
AGCATGGACGTGTTCATGGTTATGGGGTAGGTGTTATTCCTTCTGAGTTGTTTGGATCATCTTCCAATGTACGTGATCTTGAGCGTCGTCTTAATGAGCCAGAACAACGC
CTTCAAGAATTTGAACGACAAAGAAAAGTCGAGGTACAAGCCCTCAAAAATCAAATTGTTGAATTAAAAAATCGTTTTGAGGATAGATTTAAAACAATGATAGCAGAGAT
GCGTAAATAATTTGTTACTAATTGATTATGTAGTAGTTAAATGTTCTAGAACTTTTGTAGTTATTGTCTATAGAAACAATTTATGAGATCATGTCAATATTAATTTGTCT
ATATCTTTGTACTTGCAATTCTAGGAATTACATGTAAGTAGCTATTGTATTCAAGTGCT
Protein sequenceShow/hide protein sequence
MFQLLRTLSSTVVEKGVSASTKGSTSELKSYAPQVVDGTLDRNEDEIFVQVFGPEKHGRVHGYGVGVIPSELFGSSSNVRDLERRLNEPEQRLQEFERQRKVEVQALKNQ
IVELKNRFEDRFKTMIAEMRK