; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005618 (gene) of Snake gourd v1 genome

Gene IDTan0005618
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptiontRNA pseudouridine synthase
Genome locationLG06:80345860..80347738
RNA-Seq ExpressionTan0005618
SyntenyTan0005618
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0034196 - acylglycerol transport (biological process)
GO:1990052 - ER to chloroplast lipid transport (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0070300 - phosphatidic acid binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsIPR001406 - Pseudouridine synthase I, TruA
IPR020094 - Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 - Pseudouridine synthase I, TruA, C-terminal
IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458279.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X1 [Cucumis melo]1.0e-16383.23Show/hide
Query:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLV
        MRC  VGS VLPP     SP IPSPNG+SSS+SR FPN  DS Y TEPP  SFKWRLLIAYDGTRYAGWQYQRSPPTIQCL+E+AL GATKLERKDL LV
Subjt:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLV

Query:  GASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAAN
        GASRTD GVHAWGQVAHF+TPFNYDSLE+VHAALNGLLP DIRVRE+SP  PDFHARFST+SKVYHYK+YN TI+DPFQRCYTYHCVYKLNYA M+EAAN
Subjt:  GASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAAN

Query:  YFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLI
        YF+GKHDFSAF NAAHN+RVV+PVKVIFRFDVI+MGAL QLEVEGSGFLYRQ+RNMV LL+QIGKEA+PP+VVPKILASRDRKELAKYAS VPP GLCL+
Subjt:  YFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLI

Query:  SINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
        SINY EDHLKLPS CPGTS GR  SV KCK+PFY
Subjt:  SINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

XP_022959478.1 uncharacterized protein LOC111460439 isoform X2 [Cucurbita moschata]1.3e-16384.8Show/hide
Query:  VGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRT
        VGSAVLP  P  LSPSIPS NG SS T R FP   DS   TEP   SFKWRL+IAYDGTRYAGWQYQRSPPTIQCLVE+ALTGAT+LERKDL LVGASRT
Subjt:  VGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRT

Query:  DAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGK
        D GVHAWGQVAHFITPFNYDSL+ +HAALNGLLPADIRVRE+SP VPDFHARFST+SKVYHYK+YND ILDPFQRCYTYHCVYKLNYA M+EAANYF+GK
Subjt:  DAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGK

Query:  HDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINYN
        HDFSAFAN AHNDRVV+PVKVIFRFDVI+MGAL QLEVEGSGFLYRQ+RNMVALLLQIGKEAIPPD+VPKILA+RDRKELAKY +C+PP GLCL+ INY 
Subjt:  HDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINYN

Query:  EDHLKLPSGCPGTSFGRRHSVSKCKLPFY
        EDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  EDHLKLPSGCPGTSFGRRHSVSKCKLPFY

XP_023006605.1 uncharacterized protein LOC111499282 isoform X2 [Cucurbita maxima]2.2e-16384.13Show/hide
Query:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLV
        M C  VGSAVLP  P  LSPSIPS  G+ SST R FPN  DS    EP   SFKWRL+IAYDGTRYAGWQYQRSPPTIQCL+E+ALTGAT+LERKDL LV
Subjt:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLV

Query:  GASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAAN
        GASRTD GVHAWGQVAHFITPFNYDSL+ +HAALNGLLPADIRVREISP VPDFHARFST+SKVYHYK+YND ILDPFQRCYTYHCVYKLNYA M+EAAN
Subjt:  GASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAAN

Query:  YFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLI
        YF+GKHDFSAFAN AHNDRVV+PVKVIFRFDVI+MGAL QLEVEGSGFLYRQ+RNMVALLLQIGKEAIPPDVVPKILASRDRK LAKY +C+PP GLCL+
Subjt:  YFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLI

Query:  SINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         INY EDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  SINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

XP_023549334.1 uncharacterized protein LOC111807720 isoform X2 [Cucurbita pepo subsp. pepo]1.7e-16383.63Show/hide
Query:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNV--ADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLR
        M C  VGSAVLP  P  LSP IPS NG S ST R FP     DS   TEP   SFKWRL++AYDGTRYAGWQYQRSPPTIQCL+E+ALTGAT+LERKDL 
Subjt:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNV--ADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLR

Query:  LVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREA
        LVGASRTD GVHAWGQVAHFITPFNYDSL+ +HAALNGLLPADIRVREISP VPDFHARFST+SKVYHYK+YND ILDPFQRCYTYHCVYKLNYA M+EA
Subjt:  LVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLC
        ANYF+GKHDFSAFANAAHNDRVV+PVKV+FRFDVI+MGAL QLEVEGSGFLYRQ+RNMVALLLQIGKEAIPPDVVPKILA+RDRKELAKY +C+PPHGLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLC

Query:  LISINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
        L+ INY EDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  LISINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

XP_023549337.1 uncharacterized protein LOC111807720 isoform X4 [Cucurbita pepo subsp. pepo]9.1e-16584.13Show/hide
Query:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLV
        M C  VGSAVLP  P  LSP IPS NG S ST R FP   DS   TEP   SFKWRL++AYDGTRYAGWQYQRSPPTIQCL+E+ALTGAT+LERKDL LV
Subjt:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLV

Query:  GASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAAN
        GASRTD GVHAWGQVAHFITPFNYDSL+ +HAALNGLLPADIRVREISP VPDFHARFST+SKVYHYK+YND ILDPFQRCYTYHCVYKLNYA M+EAAN
Subjt:  GASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAAN

Query:  YFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLI
        YF+GKHDFSAFANAAHNDRVV+PVKV+FRFDVI+MGAL QLEVEGSGFLYRQ+RNMVALLLQIGKEAIPPDVVPKILA+RDRKELAKY +C+PPHGLCL+
Subjt:  YFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLI

Query:  SINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         INY EDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  SINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

TrEMBL top hitse value%identityAlignment
A0A1S3C7L6 tRNA pseudouridine synthase4.9e-16483.23Show/hide
Query:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLV
        MRC  VGS VLPP     SP IPSPNG+SSS+SR FPN  DS Y TEPP  SFKWRLLIAYDGTRYAGWQYQRSPPTIQCL+E+AL GATKLERKDL LV
Subjt:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLV

Query:  GASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAAN
        GASRTD GVHAWGQVAHF+TPFNYDSLE+VHAALNGLLP DIRVRE+SP  PDFHARFST+SKVYHYK+YN TI+DPFQRCYTYHCVYKLNYA M+EAAN
Subjt:  GASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAAN

Query:  YFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLI
        YF+GKHDFSAF NAAHN+RVV+PVKVIFRFDVI+MGAL QLEVEGSGFLYRQ+RNMV LL+QIGKEA+PP+VVPKILASRDRKELAKYAS VPP GLCL+
Subjt:  YFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLI

Query:  SINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
        SINY EDHLKLPS CPGTS GR  SV KCK+PFY
Subjt:  SINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

A0A6J1H4M7 tRNA pseudouridine synthase1.2e-16284.29Show/hide
Query:  VGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNV--ADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGAS
        VGSAVLP  P  LSPSIPS NG SS T R FP     DS   TEP   SFKWRL+IAYDGTRYAGWQYQRSPPTIQCLVE+ALTGAT+LERKDL LVGAS
Subjt:  VGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNV--ADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGAS

Query:  RTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFI
        RTD GVHAWGQVAHFITPFNYDSL+ +HAALNGLLPADIRVRE+SP VPDFHARFST+SKVYHYK+YND ILDPFQRCYTYHCVYKLNYA M+EAANYF+
Subjt:  RTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFI

Query:  GKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISIN
        GKHDFSAFAN AHNDRVV+PVKVIFRFDVI+MGAL QLEVEGSGFLYRQ+RNMVALLLQIGKEAIPPD+VPKILA+RDRKELAKY +C+PP GLCL+ IN
Subjt:  GKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISIN

Query:  YNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
        Y EDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  YNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

A0A6J1H621 tRNA pseudouridine synthase6.3e-16484.8Show/hide
Query:  VGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRT
        VGSAVLP  P  LSPSIPS NG SS T R FP   DS   TEP   SFKWRL+IAYDGTRYAGWQYQRSPPTIQCLVE+ALTGAT+LERKDL LVGASRT
Subjt:  VGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRT

Query:  DAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGK
        D GVHAWGQVAHFITPFNYDSL+ +HAALNGLLPADIRVRE+SP VPDFHARFST+SKVYHYK+YND ILDPFQRCYTYHCVYKLNYA M+EAANYF+GK
Subjt:  DAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGK

Query:  HDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINYN
        HDFSAFAN AHNDRVV+PVKVIFRFDVI+MGAL QLEVEGSGFLYRQ+RNMVALLLQIGKEAIPPD+VPKILA+RDRKELAKY +C+PP GLCL+ INY 
Subjt:  HDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINYN

Query:  EDHLKLPSGCPGTSFGRRHSVSKCKLPFY
        EDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  EDHLKLPSGCPGTSFGRRHSVSKCKLPFY

A0A6J1L0L1 tRNA pseudouridine synthase1.1e-16384.13Show/hide
Query:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLV
        M C  VGSAVLP  P  LSPSIPS  G+ SST R FPN  DS    EP   SFKWRL+IAYDGTRYAGWQYQRSPPTIQCL+E+ALTGAT+LERKDL LV
Subjt:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLV

Query:  GASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAAN
        GASRTD GVHAWGQVAHFITPFNYDSL+ +HAALNGLLPADIRVREISP VPDFHARFST+SKVYHYK+YND ILDPFQRCYTYHCVYKLNYA M+EAAN
Subjt:  GASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAAN

Query:  YFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLI
        YF+GKHDFSAFAN AHNDRVV+PVKVIFRFDVI+MGAL QLEVEGSGFLYRQ+RNMVALLLQIGKEAIPPDVVPKILASRDRK LAKY +C+PP GLCL+
Subjt:  YFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLI

Query:  SINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         INY EDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  SINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

A0A6J1L2M8 tRNA pseudouridine synthase3.5e-16283.63Show/hide
Query:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFP--NVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLR
        M C  VGSAVLP  P  LSPSIPS  G+ SST R FP  N  DS    EP   SFKWRL+IAYDGTRYAGWQYQRSPPTIQCL+E+ALTGAT+LERKDL 
Subjt:  MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFP--NVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLR

Query:  LVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREA
        LVGASRTD GVHAWGQVAHFITPFNYDSL+ +HAALNGLLPADIRVREISP VPDFHARFST+SKVYHYK+YND ILDPFQRCYTYHCVYKLNYA M+EA
Subjt:  LVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREA

Query:  ANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLC
        ANYF+GKHDFSAFAN AHNDRVV+PVKVIFRFDVI+MGAL QLEVEGSGFLYRQ+RNMVALLLQIGKEAIPPDVVPKILASRDRK LAKY +C+PP GLC
Subjt:  ANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLC

Query:  LISINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
        L+ INY EDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  LISINYNEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

SwissProt top hitse value%identityAlignment
A3DJK8 tRNA pseudouridine synthase A2.4e-4340.16Show/hide
Query:  RLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFH
        +L+I YDGT Y GWQ Q++  T+Q  +E+A+ G T  E+ D  L+GASRTD GVHA GQVA+FIT       +    ALN +LP DI ++E   V  DFH
Subjt:  RLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFH

Query:  ARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRN
        AR+    K Y Y +YN        R  TYH  +KL++  M+ AA+YF+G HDFSAF ++  + +    V+ I    +     + + E+ G GFLY  +R 
Subjt:  ARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRN

Query:  MVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINY
        +V  L+++G   I  D +P+I+ SR RK   + A   P  GL L+ + Y
Subjt:  MVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINY

A4J151 tRNA pseudouridine synthase A3.7e-4439.84Show/hide
Query:  RLLIAYDGTRYAGWQYQRSP--PTIQCLVEKALTGATKLERKDLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPD
        +L +AYDGT Y G+Q QR     TIQ  +EKAL   + + +  ++++GA RTDAGVHA GQV +F +       E    ALN LLP DI+V +   V  D
Subjt:  RLLIAYDGTRYAGWQYQRSP--PTIQCLVEKALTGATKLERKDLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPD

Query:  FHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQI
        FHARFS ++K Y Y +Y+  ++ PF R Y YH   +L+   M+E A Y +G +DF +F   A    V D ++ I+R D+I+   +  L + G+GFLY  +
Subjt:  FHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQI

Query:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINY
        R +   LL IG   I P+ + KI+ S++R       +  PP GLCL+ + Y
Subjt:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINY

B1I1B5 tRNA pseudouridine synthase A1.5e-4843.25Show/hide
Query:  RLLIAYDGTRYAGWQYQRSP--PTIQCLVEKALTGATKLERKDLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPD
        RL +AYDGT Y G+Q Q     PTIQ  +E+ L    +L    L++ GASRTDAGVHA GQV +F+T       E + AALNG+LP DI   +   V  D
Subjt:  RLLIAYDGTRYAGWQYQRSP--PTIQCLVEKALTGATKLERKDLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPD

Query:  FHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQI
        FHAR+S ++K Y Y LYN  +  PFQR Y+ H    L+   MR AA + +G+HDFS F  A     V   V+ + R D+     L +L     GFLY  +
Subjt:  FHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQI

Query:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINYN
        R M   LL++G E + P+ +P I+AS DR   A+    VPPHGLCL  + Y+
Subjt:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINYN

Q6MEE7 tRNA pseudouridine synthase A 12.6e-5341.18Show/hide
Query:  WRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDF
        ++L IAYDGT Y+GWQ Q +  +IQ  +++AL     L+++ + LVG+ RTDAGVHA GQVAHF    +Y  L  +H +LNGLLP DIR++ + PV P F
Subjt:  WRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDF

Query:  HARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVV-DPVKVIFRFDVIDMGALAQLEVEGSGFLYRQI
        H+++S I K YHY L+ + ++DPFQR Y++H   K++  ++++AA  F G HDF++FAN AH      +PV+ ++R D+       +LE EG GFLY+ +
Subjt:  HARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVV-DPVKVIFRFDVIDMGALAQLEVEGSGFLYRQI

Query:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINYNEDH
        RN+V  L+ +       + + +I A+++R++ +  A   PP GL LI + Y  ++
Subjt:  RNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINYNEDH

Q8R7Y7 tRNA pseudouridine synthase A5.4e-4341.94Show/hide
Query:  LLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHA
        L+I YDGT Y GWQYQ++  T+Q ++EKA+    K+  + + L+G+SRTD GVHA  QVA+F T       E +  ALN +LP D+ V +   V   FHA
Subjt:  LLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHA

Query:  RFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNM
        R+S  SK Y Y + N     P  R Y +H  Y L+   M++AA +F G HDFSAF   A  ++ V+PVK IF   V   G L ++EVE  GFLY  +R +
Subjt:  RFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNM

Query:  VALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINY
        V  L+ +G   I    +P I+ S+DR    K     PP GL L+ I Y
Subjt:  VALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINY

Arabidopsis top hitse value%identityAlignment
AT1G34150.1 Pseudouridine synthase family protein1.3e-1531.06Show/hide
Query:  LLIAYDGTRYAGWQYQ-RSPPTIQCLVEKALTGATKL--ERKDLRLVGASRTDAGVHAWGQVAHFITPFNY-----DSLENVHA------------ALNG
        L I Y G R+ G+  + +  P+I+  V KAL     L  ++KD       RTD GV + GQV              DS   V+              LN 
Subjt:  LLIAYDGTRYAGWQYQ-RSPPTIQCLVEKALTGATKL--ERKDLRLVGASRTDAGVHAWGQVAHFITPFNY-----DSLENVHA------------ALNG

Query:  LLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAF-----ANAAHNDRVVDPVKVIFRFD
         LP DIRV   SP   DFHARFS  ++ Y Y  +                   LN + M  A   FIG+HDF  F     AN     R V   +V    +
Subjt:  LLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAF-----ANAAHNDRVVDPVKVIFRFD

Query:  VIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKY--ASCVP
          +   L    + GS FL+ QIR MVA+L  IG+     DV+  +L ++      +Y  AS +P
Subjt:  VIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKY--ASCVP

AT3G06950.1 Pseudouridine synthase family protein2.0e-12264.85Show/hide
Query:  SAVLPPTPPSLSPS--IPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRT
        S V P  PPSL  +  + SP   S +       V+DS         ++KWRL+IAYDGTR+AGWQYQ SPPTIQ ++EKAL   T+L RK+L+L+GA RT
Subjt:  SAVLPPTPPSLSPS--IPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRT

Query:  DAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGK
        DAGVHAWGQVAHF+TPFNY SL++ HAALNGLLP DIRVRE+S  VP+FHARFS  SKVY Y++YNDT +DPFQR + YHC YKLN + MREAAN F+GK
Subjt:  DAGVHAWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGK

Query:  HDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASC-VPPHGLCLISINY
        HDFSAFANA   D V DP+K I RFDVI MG+L QLEVEGSGFLYRQ+RNMVALL+QIGKEA+  D+VP IL ++DR+ LAKY S    PHGLCL+S+ Y
Subjt:  HDFSAFANAAHNDRVVDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASC-VPPHGLCLISINY

Query:  NEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         EDHLKLP  CP TS GR H+++KCKLPFY
Subjt:  NEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

AT5G35400.1 Pseudouridine synthase family protein8.9e-0933.33Show/hide
Query:  RSFKW-----RLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTG------ATKLERK----DLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALN
        RS +W     +++++Y+G  + GWQ Q    T+Q +VEK+L G      A  L++K    + R++ A RTD GV A  QV  F T         +  A+N
Subjt:  RSFKW-----RLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTG------ATKLERK----DLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALN

Query:  GLLPADIRVREISPVVPDFHARFSTISKVYHY
              +RV  IS V   FH  FS   + Y Y
Subjt:  GLLPADIRVREISPVVPDFHARFSTISKVYHY

AT5G35400.2 Pseudouridine synthase family protein8.9e-0933.33Show/hide
Query:  RSFKW-----RLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTG------ATKLERK----DLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALN
        RS +W     +++++Y+G  + GWQ Q    T+Q +VEK+L G      A  L++K    + R++ A RTD GV A  QV  F T         +  A+N
Subjt:  RSFKW-----RLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTG------ATKLERK----DLRLVGASRTDAGVHAWGQVAHFITPFNYDSLENVHAALN

Query:  GLLPADIRVREISPVVPDFHARFSTISKVYHY
              +RV  IS V   FH  FS   + Y Y
Subjt:  GLLPADIRVREISPVVPDFHARFSTISKVYHY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTGCTGTGTAGTTGGTTCGGCGGTTCTTCCTCCCACTCCCCCTTCCCTTTCACCAAGCATTCCATCTCCAAATGGCTCTTCATCTTCCACCAGTCGTAGATTCCC
GAATGTAGCGGATTCCTGTTATAACACAGAACCCCCTTTGCGTAGCTTTAAATGGCGGTTGCTCATTGCTTATGACGGTACTCGATATGCAGGCTGGCAATATCAGCGGT
CACCACCTACTATCCAGTGCCTGGTTGAAAAAGCCTTGACTGGAGCAACAAAGCTTGAGAGGAAGGATCTCCGTTTAGTTGGTGCAAGCAGAACAGATGCGGGAGTTCAT
GCCTGGGGTCAGGTGGCACACTTTATTACGCCATTTAACTACGATAGCTTGGAAAACGTTCATGCTGCTCTGAATGGTCTTCTTCCTGCGGATATAAGAGTTCGGGAGAT
TAGTCCTGTTGTTCCTGACTTTCATGCTCGGTTTTCTACAATAAGCAAGGTTTATCACTACAAGCTATATAATGACACCATCTTGGATCCATTTCAACGGTGCTACACTT
ACCATTGCGTTTATAAACTCAACTATGCAGTCATGAGAGAAGCTGCAAATTATTTCATTGGAAAGCATGATTTTTCTGCTTTTGCGAATGCAGCGCATAATGATCGAGTG
GTAGATCCAGTGAAGGTCATTTTTCGTTTTGATGTCATAGACATGGGAGCTCTAGCTCAGCTAGAAGTTGAGGGTTCTGGGTTCTTGTATAGACAAATTCGGAATATGGT
TGCCTTGCTGCTTCAAATTGGAAAGGAAGCAATTCCTCCTGATGTTGTTCCTAAGATTTTGGCTTCTCGAGATCGCAAGGAGCTTGCCAAGTATGCTTCGTGCGTTCCTC
CCCACGGACTTTGTCTTATCAGTATTAATTATAACGAGGACCATCTAAAGCTTCCTTCTGGTTGCCCTGGGACTAGTTTTGGTAGGCGTCATAGTGTGAGCAAATGTAAA
CTACCTTTTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTGCTGTGTAGTTGGTTCGGCGGTTCTTCCTCCCACTCCCCCTTCCCTTTCACCAAGCATTCCATCTCCAAATGGCTCTTCATCTTCCACCAGTCGTAGATTCCC
GAATGTAGCGGATTCCTGTTATAACACAGAACCCCCTTTGCGTAGCTTTAAATGGCGGTTGCTCATTGCTTATGACGGTACTCGATATGCAGGCTGGCAATATCAGCGGT
CACCACCTACTATCCAGTGCCTGGTTGAAAAAGCCTTGACTGGAGCAACAAAGCTTGAGAGGAAGGATCTCCGTTTAGTTGGTGCAAGCAGAACAGATGCGGGAGTTCAT
GCCTGGGGTCAGGTGGCACACTTTATTACGCCATTTAACTACGATAGCTTGGAAAACGTTCATGCTGCTCTGAATGGTCTTCTTCCTGCGGATATAAGAGTTCGGGAGAT
TAGTCCTGTTGTTCCTGACTTTCATGCTCGGTTTTCTACAATAAGCAAGGTTTATCACTACAAGCTATATAATGACACCATCTTGGATCCATTTCAACGGTGCTACACTT
ACCATTGCGTTTATAAACTCAACTATGCAGTCATGAGAGAAGCTGCAAATTATTTCATTGGAAAGCATGATTTTTCTGCTTTTGCGAATGCAGCGCATAATGATCGAGTG
GTAGATCCAGTGAAGGTCATTTTTCGTTTTGATGTCATAGACATGGGAGCTCTAGCTCAGCTAGAAGTTGAGGGTTCTGGGTTCTTGTATAGACAAATTCGGAATATGGT
TGCCTTGCTGCTTCAAATTGGAAAGGAAGCAATTCCTCCTGATGTTGTTCCTAAGATTTTGGCTTCTCGAGATCGCAAGGAGCTTGCCAAGTATGCTTCGTGCGTTCCTC
CCCACGGACTTTGTCTTATCAGTATTAATTATAACGAGGACCATCTAAAGCTTCCTTCTGGTTGCCCTGGGACTAGTTTTGGTAGGCGTCATAGTGTGAGCAAATGTAAA
CTACCTTTTTATTGA
Protein sequenceShow/hide protein sequence
MRCCVVGSAVLPPTPPSLSPSIPSPNGSSSSTSRRFPNVADSCYNTEPPLRSFKWRLLIAYDGTRYAGWQYQRSPPTIQCLVEKALTGATKLERKDLRLVGASRTDAGVH
AWGQVAHFITPFNYDSLENVHAALNGLLPADIRVREISPVVPDFHARFSTISKVYHYKLYNDTILDPFQRCYTYHCVYKLNYAVMREAANYFIGKHDFSAFANAAHNDRV
VDPVKVIFRFDVIDMGALAQLEVEGSGFLYRQIRNMVALLLQIGKEAIPPDVVPKILASRDRKELAKYASCVPPHGLCLISINYNEDHLKLPSGCPGTSFGRRHSVSKCK
LPFY