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Tan0005652 (gene) of Snake gourd v1 genome

Gene IDTan0005652
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRPM1-interacting protein 4
Genome locationLG05:8275261..8277088
RNA-Seq ExpressionTan0005652
SyntenyTan0005652
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010787.1 hypothetical protein SDJN02_27583, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2990.14Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQPVSSLQPNL
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG+PDSPAKDDP+YK+G+VLGK QPVSSLQPN+
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQPVSSLQPNL

XP_022140725.1 RPM1-interacting protein 4 [Momordica charantia]1.2e-2796.88Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQ
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK Q
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQ

XP_022947539.1 uncharacterized protein LOC111451376 isoform X1 [Cucurbita moschata]5.0e-2998.46Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGK+QP
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP

XP_022947540.1 uncharacterized protein LOC111451376 isoform X2 [Cucurbita moschata]1.9e-2896.92Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGK+QP
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP

XP_038902743.1 protein NOI4 [Benincasa hispida]2.8e-2792.31Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG+PDSPAKDDP+YK+G+VLGK+QP
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP

TrEMBL top hitse value%identityAlignment
A0A6J1CFY0 RPM1-interacting protein 46.0e-2896.88Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQ
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK Q
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQ

A0A6J1G736 uncharacterized protein LOC111451376 isoform X12.4e-2998.46Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGK+QP
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP

A0A6J1G769 uncharacterized protein LOC111451376 isoform X29.3e-2996.92Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGK+QP
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP

A0A6J1I4X6 uncharacterized protein LOC111469905 isoform X29.3e-2996.92Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGK+QP
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP

A0A6J1I7R1 uncharacterized protein LOC111469905 isoform X12.4e-2998.46Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGK+QP
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQP

SwissProt top hitse value%identityAlignment
O22633 Protein NOI45.1e-1665.67Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY--KHGAVLGKTQP
        M++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    K QP
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY--KHGAVLGKTQP

Q8GYN5 RPM1-interacting protein 41.1e-0559.38Show/hide
Query:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG
        +PKFG+WD N+P+SA+G+T IFNK R E+ +G
Subjt:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein2.7e-2076.19Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY-KHGAVLGK
        MA+KG   PLPKFGEWDVNDP+SAEGFTVIFNKARNEKK GG  DSP KD+P Y K+G VL K
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY-KHGAVLGK

AT4G35655.1 RPM1-interacting protein 4 (RIN4) family protein3.5e-1273.17Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTG
        MA    + PLPKFGEWDVNDPA+AEGFTVIF+KA  +KKTG
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTG

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein5.6e-1863.38Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY--KHGAVLGKTQPVSSL
        M++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    K QPV  +
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY--KHGAVLGKTQPVSSL

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein2.1e-1766.67Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY--KHGAVLGKTQPVSSL
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    K QPV  +
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY--KHGAVLGKTQPVSSL

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein1.4e-1669.49Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY--KHGAVLGKTQP
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    K QP
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY--KHGAVLGKTQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAAAAGGCAGTAGCAGTCCCTTGCCTAAGTTCGGCGAATGGGATGTCAACGACCCCGCATCTGCTGAGGGATTCACAGTAATCTTTAATAAAGCCAGGAACGA
GAAAAAGACCGGCGGCTTACCTGACTCTCCAGCAAAGGATGACCCTTCATACAAGCATGGGGCTGTTCTTGGAAAGACTCAGCCTGTAAGTTCTTTGCAGCCAAATCTTT
CCAATTTCTTTTATTGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAAAAGGCAGTAGCAGTCCCTTGCCTAAGTTCGGCGAATGGGATGTCAACGACCCCGCATCTGCTGAGGGATTCACAGTAATCTTTAATAAAGCCAGGAACGA
GAAAAAGACCGGCGGCTTACCTGACTCTCCAGCAAAGGATGACCCTTCATACAAGCATGGGGCTGTTCTTGGAAAGACTCAGCCTGTAAGTTCTTTGCAGCCAAATCTTT
CCAATTTCTTTTATTGGTTTTGACAACTCACCATTGGAACCTGTCCTTGTTAGACTATTCCAAATGTGTCTTTCTAGATGTTCTTGCATTCATTGGAGCCACATTGTGGG
ATCAAGGAGTGGTTTATTTAGTGTAAATTACTGATAGAGCAACTGTTGTAAATATACCATGTTGTTTAAACCAATTCCATCTGTTTTAGAAGTAAGAACACTGCTATTTT
CTCACGATTGCAAGTTGGGATTTGCAGAAAAAATGGTTTTGCTGCTTGCA
Protein sequenceShow/hide protein sequence
MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGKTQPVSSLQPNLSNFFYWF