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Tan0005655 (gene) of Snake gourd v1 genome

Gene IDTan0005655
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiontranscription factor PRE5-like
Genome locationLG05:85139496..85139892
RNA-Seq ExpressionTan0005655
SyntenyTan0005655
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044172 - Transcription factor ILI2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584448.1 Transcription factor PRE5, partial [Cucurbita argyrosperma subsp. sororia]6.9e-2377.22Show/hide
Query:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLL
        MASS   DD+++NL+ +LQTLLPQLNH L  STVS AEILKETCDYIKKLQREVDDLSERL K+LDSMG+DFEM+K LL
Subjt:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLL

KAG7020038.1 Transcription factor PRE5 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-2378.48Show/hide
Query:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLL
        MASS   DD+++NL+ +LQTLLPQLNH L  STVS AEILKETCDYIKKLQREVDDLSERL K+LDSMGVDFEM+K LL
Subjt:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLL

XP_008440200.1 PREDICTED: transcription factor PRE5-like [Cucumis melo]1.7e-2175.31Show/hide
Query:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLLL
        MASS   D+E+KNLV KL+TLLPQLNH  D+S+  S  EILKETCDYIKKLQ+EVDDLSERL K+LDSMGVDFEM+KDLL+
Subjt:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLLL

XP_011649678.1 transcription factor PRE5 [Cucumis sativus]9.0e-2380Show/hide
Query:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLL
        MASS   DDE+KNLV KLQTLLPQLNH   +S+ VSA EILKETCDYIKKLQREVDDLSERL K+LDSMG+DFEM+KDLL
Subjt:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLL

XP_038895474.1 transcription factor PRE5-like [Benincasa hispida]1.1e-2072.29Show/hide
Query:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHS---TVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLLL
        MASS   DD+++NLVFKLQTLLP LN   D+    +VSA +ILKETCDYIKKLQREVDDLSERL K+LDSMGVD EM+KDL+L
Subjt:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHS---TVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLLL

TrEMBL top hitse value%identityAlignment
A0A0A0LQ05 DNA binding protein4.3e-2380Show/hide
Query:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLL
        MASS   DDE+KNLV KLQTLLPQLNH   +S+ VSA EILKETCDYIKKLQREVDDLSERL K+LDSMG+DFEM+KDLL
Subjt:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLL

A0A1S3B0J1 transcription factor PRE5-like8.2e-2275.31Show/hide
Query:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLLL
        MASS   D+E+KNLV KL+TLLPQLNH  D+S+  S  EILKETCDYIKKLQ+EVDDLSERL K+LDSMGVDFEM+KDLL+
Subjt:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLLL

A0A498JMP9 BHLH domain-containing protein1.8e-1362.34Show/hide
Query:  SSDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMG---VDFEMLKDLL
        SSDDEIK LV KLQ LLPQL H+L ++ VSA+ IL+ETC YIK+L REV+DLS+RL + LDS G   VD E+++ LL
Subjt:  SSDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMG---VDFEMLKDLL

A0A5A7SZP9 Transcription factor PRE5-like8.2e-2275.31Show/hide
Query:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLLL
        MASS   D+E+KNLV KL+TLLPQLNH  D+S+  S  EILKETCDYIKKLQ+EVDDLSERL K+LDSMGVDFEM+KDLL+
Subjt:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLLL

A0A5D3BKI2 Transcription factor PRE5-like1.7e-1976Show/hide
Query:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEM
        MASS   D+E+KNLV KL+TLLPQLNH  D+S+  S  EILKETCDYIKKLQ+EVDDLSERL K+LDSMGVDFEM
Subjt:  MASS---DDEIKNLVFKLQTLLPQLNHNLDHST-VSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEM

SwissProt top hitse value%identityAlignment
A2XD15 Transcription factor ILI32.4e-1051.61Show/hide
Query:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSM
        +D+EI  L+ KLQ LLP+ + +   S  SA+++LKETC YIK L REVDDLS+RL + + +M
Subjt:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSM

Q10R47 Transcription factor ILI32.4e-1051.61Show/hide
Query:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSM
        +D+EI  L+ KLQ LLP+ + +   S  SA+++LKETC YIK L REVDDLS+RL + + +M
Subjt:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSM

Q9CA64 Transcription factor PRE31.8e-1054.24Show/hide
Query:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKL
        S+D+I +L+ KLQ LLP+L  +     VSAA +L++TC+YI+ L REVDDLSERL + L
Subjt:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKL

Q9LJX1 Transcription factor PRE51.4e-1049.23Show/hide
Query:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVD
        SDD++ +LV KL+  LP+++       VSA+++L+ETC+YI+KL REVD+LS+RL + LDS+  D
Subjt:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVD

Q9LXG5 Transcription factor PRE23.1e-1046.77Show/hide
Query:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSM
        SDD+I +L+ KL+  +P++  N   +TVSA+++L+ETC+YI+ L +E DDLS+RL + L+S+
Subjt:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSM

Arabidopsis top hitse value%identityAlignment
AT1G26945.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.1e-1054.1Show/hide
Query:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDS
        SDD+I +LV KLQ L+P+L        VSA+++L+ETC+YI+ L REVDDLS+RL + L S
Subjt:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDS

AT1G74500.1 activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 11.3e-1154.24Show/hide
Query:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKL
        S+D+I +L+ KLQ LLP+L  +     VSAA +L++TC+YI+ L REVDDLSERL + L
Subjt:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKL

AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein9.9e-1249.23Show/hide
Query:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVD
        SDD++ +LV KL+  LP+++       VSA+++L+ETC+YI+KL REVD+LS+RL + LDS+  D
Subjt:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVD

AT3G47710.1 BANQUO 32.9e-1150.82Show/hide
Query:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDS
        +D++I +LV +L  LLP+L +N     VSA+ +L+ETC YI+ L +EVDDLSERL + L+S
Subjt:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDS

AT5G15160.1 BANQUO 22.2e-1146.77Show/hide
Query:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSM
        SDD+I +L+ KL+  +P++  N   +TVSA+++L+ETC+YI+ L +E DDLS+RL + L+S+
Subjt:  SDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTGATGATGAGATTAAAAATCTTGTCTTCAAATTGCAAACTTTGCTCCCTCAGCTTAACCATAACCTCGACCACTCTACGGTATCAGCGGCGGAGATTTT
GAAGGAGACGTGTGATTATATAAAGAAATTGCAGAGGGAGGTGGATGATCTAAGTGAGAGGCTATGCAAGAAGCTGGATTCAATGGGTGTTGACTTTGAGATGCTTAAAG
ATCTTCTTCTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
TATCATTATTCTTTCAACTTTGCTTCATTCATGGCTTCTTCTGATGATGAGATTAAAAATCTTGTCTTCAAATTGCAAACTTTGCTCCCTCAGCTTAACCATAACCTCGA
CCACTCTACGGTATCAGCGGCGGAGATTTTGAAGGAGACGTGTGATTATATAAAGAAATTGCAGAGGGAGGTGGATGATCTAAGTGAGAGGCTATGCAAGAAGCTGGATT
CAATGGGTGTTGACTTTGAGATGCTTAAAGATCTTCTTCTTGCTTAGAAATTTTAATTAATGATCTTTTC
Protein sequenceShow/hide protein sequence
MASSDDEIKNLVFKLQTLLPQLNHNLDHSTVSAAEILKETCDYIKKLQREVDDLSERLCKKLDSMGVDFEMLKDLLLA